Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2033 ATGAACCTATCCAACATGGCAAATCTTTGTTTTCATTTCCCCTTGCTCATGTTCTCCCTACTTTGTCTCAAGGTTTGTTTCACTTTATGCCACACCGATCTTACTATGAATGATGAATTGGCACTACTTGCTTTCAAGTTTTCTGTCAAGGACCCTTACAATCACTTGGCTAATTGGTCCAACTCTTCTTCCATTTGCAATTGGGTTGGGGTTATGTGTGATGCTCACCATGTGAGAGTAATGGCCTTGAATCTTGGTGAGATGGGTCTCAAGGGAACTTTGCCCTCAAAAATTGGGAATTTGTCTTTCCTAGTTGAACTTGACCTTCATAGTAATAACCTTTATGGTGAGTTGCCAAAGGAGTTGACCCAATTACACAAGCTGCAAATTCTCAATTTGAGCTACAATGAATTCAATGGAGGAATCCCAACTTGGATTGGAAGCTTATTTATGCTTCAACACTTCCATCTCCATAATAATAGTTTTGGAGGTTTTATTCCTAAAAGCATATCCAACTTGTCAAAGTTAGAGACTTTGGATTGGAATTATAACTTTATTGAAGGAGTTATTCCATCTGAGATTGGAAAACTTCAAAGTTTGAAGATTTTACGGATTGCAAGAAACAAGCTTTCAGGAAGAATACCCCTAACTATTTCTAACTTATCCTCACTTGAGTTATTGTCTTTGTCTTTCAACTCCTTAACAGGAGATATTCCCAAAGCAATTGGTGCTCTCACAAACCTGAAAATACTATATCTAGGTGCTAACAAGTTGTCTGGCCAAATACCAAGGAATATTGGAAACTTGACAAAACTTCAACATCTACAACTGGGTGAAAATAACATAAAAGGTGATATACCAGAAGGTATTGGAAAACTGGATTTGCTTCAAGAGCTATATCTTTCTTTTAATAATTTACGAGGAGGTATTCCTGAGCAGATTGGTAATCTTAAAAGTCTGAAACTTCTATATTTAGGACGTAATCAGTTTTCTGGCCAAATATCATCTACTATCTTTAACATATCTGAGCTGCAAGAGATTGATTTAAGTTGGAATAATTTGTTGGGAGGCATTCCTTCAAATATATGTCATGGCCTTCCAAATTTACAAGCTTTGCATCTTCAAGCCAACAAATTATTTGGAGCTATACCATCTGGTTGGACACAATGCAAGCAGCTCAAAGAGTTAACATTAGAACTCAACTTATTCACAGGCCATATACCCAAAAGCATCAGGAATTTGACTATGCTTCAATTGCTAAATCTGTATTCCAATAACTTGGAAGGCATTATTCCAGCAACTTTGGGTGGCTTGAAGAATTTGCAAGATCTTTCCCTAGCACATAACAATTTGCAAGGAAATATTCCTAAATCATTCGGAAATATGTTGAGCTTAATAAAATTGGACCTTTCTGATAATAATTTATCTGGGAAGATTCCTAAATCTTTGGAGTTACTTATTTATCTTAAGTATGTTAATCTCTCCTATAACAAACTCCAAGGAGAGATTCCAAGTAGAGGAGTTTTTAAAAATTTGACTCCTGAATCTTTTATGATGAATCAAGCTCTTTGTGGCAAGCCGCAACTCCAAGTGCCTCCCTGCAAAAAAGAAACAAGAAAAGGATCAATGACAATATTGCTTTTATTGAGATGCATATTACCCATAGTTGTATCAATAATTTTGGTTGTCTTAGGCATTATGCTTTTAAGACATAAACAACAACAAAATTCAAGGGGTCTAGTTGAAAGGGAACTATCAACTTTAGGAGTGCCGAGAAGAATTTCTTATTTTGAAATCCAAGAAGCAACCAATAGATTTGATGAGAGTAGCATACTTGGAAGGGGTAGTTATGGTTCTGTGTTTAAAGGAACGCTTTCCAATGGAATGATCGTTGCAGTTAAGATCTTCAATTGTGATTCACAAGTAATGTTAAGGAGCTTTGAAAAGGAATGTGACATATTATGTAATGCACGCCATCGCAATTTGGTGAAGGTTATAAGCTGTTGTTCGAATGTTGATTTCAAATCTTTGGTAATGGAGTTCATGCCCAATGGGAGTCTGGAAAGATGGTTATATTCTTACAACTATTTTTTAGATTTTCTTCAAAGGTTGAATATAATGATAAATGTTGCAACTGCTTTAGAATATCTCCATCATGGCTTGTTAACACCAATTGTTCATTGTGATTTAAAGCCAAGCAACATTTTATTGGATGATGAAATGGTTGCTCATGTGAGTGACTTTGGAATTTCTAAACTTTTAGATAAAGAGGAATCTAAGATATTCACAGAGACAATACCTACTATTGGCTATGTGGCACCTGAGTATGGATCTTCTGGAGTTGTTTCAACAAAAATAGATGTGTATAGCTATGGAATCATGCTATTAGAGGTGTTTACAAGAAAAAGGCCAACAGAAGATATGTTTGTGTCAGGATTGAGGTTAAAGAGTTGGGTAAGTGAGTCAATGCCTCATGCAATAATTCAAGTCATGGATTCCAATTTATTGCAAGGAGATGAACATCATATAAATAATATATTGACATCTACATCCTCTATTCTTGAATTGGCCTTGAATTGTTGCACTGATCTTCCAAAAGCACGTGGCAATATGATTGATGTTGTAGTATCATTGAACAAGATCAAAGGGATGTTTTTGCATAGGCAACAGCATCACGTTTAG 2682 0.3568 MNLSNMANLCFHFPLLMFSLLCLKVCFTLCHTDLTMNDELALLAFKFSVKDPYNHLANWSNSSSICNWVGVMCDAHHVRVMALNLGEMGLKGTLPSKIGNLSFLVELDLHSNNLYGELPKELTQLHKLQILNLSYNEFNGGIPTWIGSLFMLQHFHLHNNSFGGFIPKSISNLSKLETLDWNYNFIEGVIPSEIGKLQSLKILRIARNKLSGRIPLTISNLSSLELLSLSFNSLTGDIPKAIGALTNLKILYLGANKLSGQIPRNIGNLTKLQHLQLGENNIKGDIPEGIGKLDLLQELYLSFNNLRGGIPEQIGNLKSLKLLYLGRNQFSGQISSTIFNISELQEIDLSWNNLLGGIPSNICHGLPNLQALHLQANKLFGAIPSGWTQCKQLKELTLELNLFTGHIPKSIRNLTMLQLLNLYSNNLEGIIPATLGGLKNLQDLSLAHNNLQGNIPKSFGNMLSLIKLDLSDNNLSGKIPKSLELLIYLKYVNLSYNKLQGEIPSRGVFKNLTPESFMMNQALCGKPQLQVPPCKKETRKGSMTILLLLRCILPIVVSIILVVLGIMLLRHKQQQNSRGLVERELSTLGVPRRISYFEIQEATNRFDESSILGRGSYGSVFKGTLSNGMIVAVKIFNCDSQVMLRSFEKECDILCNARHRNLVKVISCCSNVDFKSLVMEFMPNGSLERWLYSYNYFLDFLQRLNIMINVATALEYLHHGLLTPIVHCDLKPSNILLDDEMVAHVSDFGISKLLDKEESKIFTETIPTIGYVAPEYGSSGVVSTKIDVYSYGIMLLEVFTRKRPTEDMFVSGLRLKSWVSESMPHAIIQVMDSNLLQGDEHHINNILTSTSSILELALNCCTDLPKARGNMIDVVVSLNKIKGMFLHRQQHHV 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2033 893 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 279 879 - -
Prci6g2033 893 ProSitePatterns Protein kinases ATP-binding region signature. 612 634 IPR017441 GO:0005524
Prci6g2033 893 Gene3D Transferase(Phosphotransferase) domain 1 682 891 - -
Prci6g2033 893 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 284 538 - -
Prci6g2033 893 Pfam Protein kinase domain 607 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2033 893 FunFam Serine-threonine protein kinase plant-type 587 681 - -
Prci6g2033 893 ProSiteProfiles Protein kinase domain profile. 606 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2033 893 SMART LRR_sd22_2 197 223 - -
Prci6g2033 893 SMART LRR_sd22_2 438 464 - -
Prci6g2033 893 SMART LRR_sd22_2 293 319 - -
Prci6g2033 893 SMART LRR_sd22_2 245 271 - -
Prci6g2033 893 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 35 192 - -
Prci6g2033 893 FunFam Piriformospora indica-insensitive protein 2 193 283 - -
Prci6g2033 893 Gene3D Ribonuclease Inhibitor 35 188 IPR032675 -
Prci6g2033 893 Gene3D Ribonuclease Inhibitor 189 289 IPR032675 -
Prci6g2033 893 SMART LRR_typ_2 462 486 IPR003591 -
Prci6g2033 893 SMART LRR_typ_2 269 292 IPR003591 -
Prci6g2033 893 SMART LRR_typ_2 149 173 IPR003591 -
Prci6g2033 893 SMART LRR_typ_2 414 437 IPR003591 -
Prci6g2033 893 SMART LRR_typ_2 221 244 IPR003591 -
Prci6g2033 893 SMART LRR_typ_2 245 268 IPR003591 -
Prci6g2033 893 SMART LRR_typ_2 293 317 IPR003591 -
Prci6g2033 893 SMART LRR_typ_2 341 365 IPR003591 -
Prci6g2033 893 SMART LRR_typ_2 438 461 IPR003591 -
Prci6g2033 893 SMART LRR_typ_2 101 125 IPR003591 -
Prci6g2033 893 SMART LRR_typ_2 366 390 IPR003591 -
Prci6g2033 893 SUPERFAMILY Protein kinase-like (PK-like) 587 882 IPR011009 -
Prci6g2033 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 725 737 IPR008271 GO:0004672|GO:0006468
Prci6g2033 893 SUPERFAMILY L domain-like 37 306 - -
Prci6g2033 893 ProSiteProfiles Leucine-rich repeat profile. 464 486 IPR001611 GO:0005515
Prci6g2033 893 Pfam Leucine rich repeat 392 451 IPR001611 GO:0005515
Prci6g2033 893 Pfam Leucine rich repeat 246 306 IPR001611 GO:0005515
Prci6g2033 893 Pfam Leucine rich repeat N-terminal domain 37 74 IPR013210 -
Prci6g2033 893 Gene3D Phosphorylase Kinase; domain 1 567 681 - -
Prci6g2033 893 SMART serkin_6 606 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2033 893 Gene3D Ribonuclease Inhibitor 290 531 IPR032675 -
Prci6g2033 893 Pfam Leucine Rich Repeat 344 364 IPR001611 GO:0005515
Prci6g2033 893 Pfam Leucine Rich Repeat 464 484 IPR001611 GO:0005515
Prci6g2033 893 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 682 891 - -
Prci6g2033 893 SUPERFAMILY L domain-like 214 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2033 Prci-Chr6 21501022 21520503 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2033 32 890 Receptor kinase-like Gene Family AT3G47570 34.945 2.00e-164 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2033 Pkinase 5.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2033 - K13420 pcin:129314025 854.744