Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2032 ATGAACCTATCCAACATGGCAAATCTTTGTTTTCATTTCCCCTTGCTCATGTTCTCCCTACTTTGTCTCAAGGTTTGTTTCACTTTATGCCACACCGATCTTACTATGAATGATGAATTGGCACTACTTGCTTTCAAGTTTTCTGTCAAGGACCCTTACAATCACTTGGCTAATTGGTCCAACTCTTCTTCCATTTGCAATTGGGTTGGGGTTATGTGTGATGCTCACCATGTGAGAGTAATGGCCTTGAATCTTGGTGAGATGGGTCTCAAGGGAACTTTGCCCTCAAAAATTGGGAATTTGTCTTTCCTAGTTGAACTTGACCTTCATAGTAATAACCTTTATGGTGAGTTGCCAAAGGAGTTGACCCAATTACACAAGCTGCAAATTCTCAATTTGAGCTACAATGAATTCAATGGAGGAATCCCAACTTGGATTGGAAGCTTATTTATGCTTCAACACTTCCATCTCCATAATAATAGTTTTGGAGGTTTTATTCCTAAAAGCATATCCAACTTGTCAAAGTTAGAGACTTTGGATTGGAATTATAACTTTATTGAAGGAGTTATTCCATCTGAGATTGGAAAACTTCAAAGTTTGAAGATTTTACGGATTGCAAGAAACAAGCTTTCAGGAAGAATACCCCTAACTATTTCTAACTTATCCTCACTTGAGTTATTGTCTTTGTCTTTCAACTCCTTAACAGGAGATATTCCCAAAGCAATTGGTGCTCTCACAAACCTGAAAATACTATATCTAGGTGCTAACAAGTTGTCTGGCCAAATACCAAGGAATATTGGAAACTTGACAAAACTTCAACATCTACAACTGGGTGAAAATAACATAAAAGGTGATATACCAGAAGGTATTGGAAAACTGGATTTGCTTCAAGAGCTATATCTTTCTTTTAATAATTTACGAGGCATTCCTTCAAATATATGTCATGGCCTTCCAAATTTACAAGCTTTGCATCTTCAAGCCAACAAATTATTTGGAGCTATACCATCTGGTTGGACACAATGCAAGCAGCTCAAAGAGTTAACATTAGAACTCAACTTATTCACAGGCCATATACCCAAAAGCATCAGGAATTTGACTATGCTTCAATTGCTAAATCTGTATTCCAATAACTTGGAAGGTTTAATACCTATGGAAATAGGCAATCTTCATAAGCTTGAATTCTTAGAATTGTCATCTAACAAGTTGAGCGGTTCTATACCATTGACCATTTTTAACATTTCAACTTTGAAATTCTTAAACCTTGAAAGCAATTTTATATCTGGCAATCTTCCATCAAAATTTGGGAATCTCACTAGTTTCTTTGAACTATCCTTGGGAGAAAACATATTGAGAGGATCAATTCCAAAAGCAATTGGTACCTTATTAGATCTTCAATATTTGAATCTTGAAGGCAATGAGCTACATGGCCTAATCATTGATGAGATTTGTTATATCACAAAGCTTGCCTATTTATCTTTAAGTAGAAACAAGTTTTCTGGAGGAATACCCCCTTGTTTAGCAAATGTTACCTCTTTACGAGACCTTTACTTAGACTCTAATAAGTTAATTTCAAAAATACCTCCTTCATTTTGGAATTTGAAGGATATATTGAGAGTAAACTTATCTTCCAATATTTTAGGTGGAAATGTATCATTGAAGATTGGAAACTTGAATGCTCTTGTGTTACTAGATTTGTCAAGAAATCATATTTCAGGCATTATTCCAGCAACTTTGGGTGGCTTGAAGAATTTGCAAGATCTTTCCCTAGCACATAACAATTTGCAAGGAAATATTCCTAAATCATTCGGAAATATGTTGAGCTTAATAAAATTGGACCTTTCTGATAATAATTTATCTGGGAAGATTCCTAAATCTTTGGAGTTACTTATTTATCTTAAGTATGTTAATCTCTCCTATAACAAACTCCAAGGAGAGATTCCAAGTAGAGGAGTTTTTAAAAATTTGACTCCTGAATCTTTTATGATGAATCAAGCTCTTTGTGGCAAGCCGCAACTCCAAGTGCCTCCCTGCAAAAAAGAAACAAGAAAAGGATCAATGACAATATTGCTTTTATTGAGATGCATATTACCCATAGTTGTATCAATAATTTTGGTTGTCTTAGGCATTATGCTTTTAAGACATAAACAACAACAAAATTCAAGGGGTCTAGTTGAAAGGGAACTATCAACTTTAGGAGTGCCGAGAAGAATTTCTTATTTTGAAATCCAAGAAGCAACCAATAGATTTGATGAGAGTAGCATACTTGGAAGGGGTAGTTATGGTTCTGTGTTTAAAGGAACGCTTTCCAATGGAATGATCGTTGCAGTTAAGATCTTCAATTGTGATTCACAAGTAATGTTAAGGAGCTTTGAAAAGGAATGTGACATATTATGTAATGCACGCCATCGCAATTTGGTGAAGGTTATAAGCTGTTGTTCGAATGTTGATTTCAAATCTTTGGTAATGGAGTTCATGCCCAATGGGAGTCTGGAAAGATGGTTATATTCTTACAACTATTTTTTAGATTTTCTTCAAAGGTTGAATATAATGATAAATGTTGCAACTGCTTTAGAATATCTCCATCATGGCTTGTTAACACCAATTGTTCATTGTGATTTAAAGCCAAGCAACATTTTATTGGATGATGAAATGGTTGCTCATGTGAGTGACTTTGGAATTTCTAAACTTTTAGATAAAGAGGAATCTAAGATATTCACAGAGACAATACCTACTATTGGCTATGTGGCACCTGAGTATGGATCTTCTGGAGTTGTTTCAACAAAAATAGATGTGTATAGCTATGGAATCATGCTATTAGAGGTGTTTACAAGAAAAAGGCCAACAGAAGATATGTTTGTGTCAGGATTGAGGTTAAAGAGTTGGGTAAGTGAGTCAATGCCTCATGCAATAATTCAAGTCATGGATTCCAATTTATTGCAAGGAGATGAACATCATATAAATAATATATTGACATCTACATCCTCTATTCTTGAATTGGCCTTGAATTGTTGCACTGATCTTCCAAAAGCACGTGGCAATATGATTGATGTTGTAGTATCATTGAACAAGATCAAAGGGATGTTTTTGCATAGGCAACAGCATCACGTTTAG 3111 0.3504 MNLSNMANLCFHFPLLMFSLLCLKVCFTLCHTDLTMNDELALLAFKFSVKDPYNHLANWSNSSSICNWVGVMCDAHHVRVMALNLGEMGLKGTLPSKIGNLSFLVELDLHSNNLYGELPKELTQLHKLQILNLSYNEFNGGIPTWIGSLFMLQHFHLHNNSFGGFIPKSISNLSKLETLDWNYNFIEGVIPSEIGKLQSLKILRIARNKLSGRIPLTISNLSSLELLSLSFNSLTGDIPKAIGALTNLKILYLGANKLSGQIPRNIGNLTKLQHLQLGENNIKGDIPEGIGKLDLLQELYLSFNNLRGIPSNICHGLPNLQALHLQANKLFGAIPSGWTQCKQLKELTLELNLFTGHIPKSIRNLTMLQLLNLYSNNLEGLIPMEIGNLHKLEFLELSSNKLSGSIPLTIFNISTLKFLNLESNFISGNLPSKFGNLTSFFELSLGENILRGSIPKAIGTLLDLQYLNLEGNELHGLIIDEICYITKLAYLSLSRNKFSGGIPPCLANVTSLRDLYLDSNKLISKIPPSFWNLKDILRVNLSSNILGGNVSLKIGNLNALVLLDLSRNHISGIIPATLGGLKNLQDLSLAHNNLQGNIPKSFGNMLSLIKLDLSDNNLSGKIPKSLELLIYLKYVNLSYNKLQGEIPSRGVFKNLTPESFMMNQALCGKPQLQVPPCKKETRKGSMTILLLLRCILPIVVSIILVVLGIMLLRHKQQQNSRGLVERELSTLGVPRRISYFEIQEATNRFDESSILGRGSYGSVFKGTLSNGMIVAVKIFNCDSQVMLRSFEKECDILCNARHRNLVKVISCCSNVDFKSLVMEFMPNGSLERWLYSYNYFLDFLQRLNIMINVATALEYLHHGLLTPIVHCDLKPSNILLDDEMVAHVSDFGISKLLDKEESKIFTETIPTIGYVAPEYGSSGVVSTKIDVYSYGIMLLEVFTRKRPTEDMFVSGLRLKSWVSESMPHAIIQVMDSNLLQGDEHHINNILTSTSSILELALNCCTDLPKARGNMIDVVVSLNKIKGMFLHRQQHHV 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2032 1036 PANTHER OS04G0122200 PROTEIN 426 1026 - -
Prci6g2032 1036 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 463 681 - -
Prci6g2032 1036 Gene3D Ribonuclease Inhibitor 37 147 IPR032675 -
Prci6g2032 1036 Gene3D Ribonuclease Inhibitor 344 411 IPR032675 -
Prci6g2032 1036 Pfam Protein kinase domain 750 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2032 1036 ProSiteProfiles Leucine-rich repeat profile. 607 629 IPR001611 GO:0005515
Prci6g2032 1036 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 35 192 - -
Prci6g2032 1036 SUPERFAMILY Protein kinase-like (PK-like) 730 1025 IPR011009 -
Prci6g2032 1036 FunFam Piriformospora indica-insensitive protein 2 193 286 - -
Prci6g2032 1036 Pfam Leucine rich repeat 199 258 IPR001611 GO:0005515
Prci6g2032 1036 Pfam Leucine rich repeat 556 594 IPR001611 GO:0005515
Prci6g2032 1036 Pfam Leucine rich repeat 343 402 IPR001611 GO:0005515
Prci6g2032 1036 Pfam Leucine rich repeat 271 330 IPR001611 GO:0005515
Prci6g2032 1036 FunFam Leucine-rich receptor-like protein kinase family protein 358 456 - -
Prci6g2032 1036 SMART LRR_sd22_2 293 315 - -
Prci6g2032 1036 SMART LRR_sd22_2 197 223 - -
Prci6g2032 1036 SMART LRR_sd22_2 389 415 - -
Prci6g2032 1036 SMART LRR_sd22_2 581 607 - -
Prci6g2032 1036 SMART LRR_sd22_2 245 271 - -
Prci6g2032 1036 SUPERFAMILY L domain-like 354 672 - -
Prci6g2032 1036 Pfam Leucine rich repeat N-terminal domain 37 74 IPR013210 -
Prci6g2032 1036 SUPERFAMILY RNI-like 83 427 - -
Prci6g2032 1036 SMART serkin_6 749 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2032 1036 Gene3D Phosphorylase Kinase; domain 1 710 824 - -
Prci6g2032 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 868 880 IPR008271 GO:0004672|GO:0006468
Prci6g2032 1036 Pfam Leucine Rich Repeat 607 627 IPR001611 GO:0005515
Prci6g2032 1036 Pfam Leucine Rich Repeat 511 533 IPR001611 GO:0005515
Prci6g2032 1036 ProSiteProfiles Protein kinase domain profile. 749 1029 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2032 1036 Gene3D Transferase(Phosphotransferase) domain 1 825 1034 - -
Prci6g2032 1036 ProSitePatterns Protein kinases ATP-binding region signature. 755 777 IPR017441 GO:0005524
Prci6g2032 1036 Gene3D Ribonuclease Inhibitor 412 685 IPR032675 -
Prci6g2032 1036 Gene3D Ribonuclease Inhibitor 148 237 IPR032675 -
Prci6g2032 1036 Gene3D Ribonuclease Inhibitor 238 341 IPR032675 -
Prci6g2032 1036 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 825 1034 - -
Prci6g2032 1036 SMART LRR_typ_2 581 604 IPR003591 -
Prci6g2032 1036 SMART LRR_typ_2 149 173 IPR003591 -
Prci6g2032 1036 SMART LRR_typ_2 509 532 IPR003591 -
Prci6g2032 1036 SMART LRR_typ_2 317 341 IPR003591 -
Prci6g2032 1036 SMART LRR_typ_2 245 268 IPR003591 -
Prci6g2032 1036 SMART LRR_typ_2 293 316 IPR003591 -
Prci6g2032 1036 SMART LRR_typ_2 101 125 IPR003591 -
Prci6g2032 1036 SMART LRR_typ_2 269 292 IPR003591 -
Prci6g2032 1036 SMART LRR_typ_2 605 629 IPR003591 -
Prci6g2032 1036 SMART LRR_typ_2 365 388 IPR003591 -
Prci6g2032 1036 SMART LRR_typ_2 221 244 IPR003591 -
Prci6g2032 1036 SMART LRR_typ_2 389 413 IPR003591 -
Prci6g2032 1036 SMART LRR_typ_2 557 580 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2032 Prci-Chr6 21501022 21520503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2032 534 648 Receptor kinase-like Gene Family AT3G47570 35.971 1.34e-13 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2032 Pkinase 6.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2032 - K13420 qsa:O6P43_031964 983.4