Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2026 ATGGACAAGCCTAGAATTGATGATTCCCTTGGAGTTCAAGCTGCATGCCTGGTTTTCTTGGCACTTTCTGCAGGAACTTATGGAGAGACAGAAACAGAGGCCCTTCTCCGGTGGAAAGAGAGTCTTCCAGATCAGGCAATTCTCGAGTCATGGGTCTCTCCAGCACAGAACTCAAGTGCAGCTCAAAGCCCATGTTCATGGCGTGGAATTAAATGTGATAATTCTTCAGTAAATGTGATTGAAATAAACTTGGCTTACACTGGCCTTGAAGGTACCCTACAAAACTTGAACTTCTCTGCATTTCCAAATCTTCTTCGTCTTGATCTCAAAACAAACAACCTTGTCGGAAGCATACCAGAAAACATTGGGGTGCTCTCTAAACTGCAATATCTTGACCTTTCCACGAATTACCTCAATGGCACTCTACCTATTTCAATGGCTAATTTGACTCAAGTTCACGAGCTTGATGTTTCACGAAACAATATCACTGGGACATTAGACCCTCGTCTTTTTCCTGATGGTTCTGATCAGCCCAAGACTGGACTGATAGGGATCAGAAATCTTCTCTTCCAGGACACCCTGCTTGGTGGTAGAATTCCAGATGAAATAGGGAATATAAGAAATTTAACTGTGCTAGCCTTAGATGGGAATAGCTTCCATGGACCTATTCCTCCATCTCTTGGGAACTGTACACATTTAAGTGTTCTTAGAATGTCTGGAAACCAACTCTCAGGCATGATTCCTCCTAGTTTTGGTAGATTGACTAATCTATCTGAGGTGTTCTTACACATAAATAATTTAGATGGTCCTTTACCACAAGAATTTGGAAACATCTCATCTTTAACTGTCCTGCATCTTGCTGAAAACAACTTCACGGGAGAGCTACCACCGCAAGTGTGCAAAGGTGGTAAACTTGTCAATTTCAGTGCTGCCTACAATAGTTTCAGTGGCCCGATCCCAATAAGCCTAAGAAATTGCTCGTCCTTATACAGGGCTCGGATGGAATATAACCATCTAAGGGGTTATGCAGATCAAGATTTTGGAGTGTATCCTAATCTTACTTACATGGATTTCAGCTACAATAACGTGCAAGGTGAGCTCTCTTCAAATTGGGGAAGCTGCAAAAATTTGCAATATCTTGGTGTGTCTGGAAATTCAATAGGTGGCACGATACCTGGTGAGATTTTTCAGTTGAACCAACTTGCAGAGCTAGATCTGTCTTCCAATCAAATATCAGGAGAGATTCCTCCACAAATAGGGAATTCCTCTAGTCTTTTCACTCTCTCTTTGAGTAACAACAAACTTTCAGGATTGATACCAGCAAGCATTGGAAAGTTGTCTAATTTGCAAATGCTAGACCTGTCAGATAACATGCTAAAAGGATCAATCCCTTCTGAGATAGGTGATTGCTCAAACTTGCTGAGTTTAAATTTGAGCAACAATGCCTTGAATGGAACAATCCCCTACCAAATTGGAAATCTGGCAGCCTTACAAGATCTGTTGGACTTCAGTTACAATTCACTTTCTGGCCAAATTCCATCTGATCTTGGCAAGCTAAAAAATTTGATAAGCTTGAATATCTCTCACAACAATCTAACTGGTTCTATCCCTAACTCCCTCGGCGAAATGTTGAGTTTGTCAAGCATCAACCTGTCCTACAACACTTTGGAAGGTCATGTACCTAATAGCAGCATATTTAATTCTTCCTATCCAGTGGATTTACGTAACAACAAAGGGTTATGTGGGAATATACAAGGCCTGCAACCTTGCAATGTCTCAGTCAGAGAACCTGGAGGCGGAAGCAACAAAAAGAAAGTCATAGCAGCAATTGTTGGCTCTGTGGGAGGTGCACTACTTGTTTCATCAGTGTTAGTTTGCATTTTTGTTTTCGTCTGTAAGACCAGAGCTATGAAACAGAACTCTGCACCTGAGAGAAAAAGTCCATTTTCAATATGGTATTTCAATGGTAGAATTGCTTATGAAGACATAATTGAAGCCACTAAGAATTTTGATGACACTTACTGCATTGGTGAGGGAACATTAGGAAAAGTTTACAGAGTGGGGATGCCAGGAGGTCAGGTAGTTGCTATAAAAAAGTTAAAATGCGAGGTAGACAGTTTAGACATTGAAAGTATAAAATCCTTCAAAAGTGAGATAGAAGCCATGACTGAAACACGTCACCGGAACATTGTGAAGTTGTACGGGTTTTGCTCAGACCCCTTGCACACATTTTTGATTTATGAATACATGGAAAGAGGGAGCTTAAGTGATATGCTGAGAGATGACAAAAAGGCTACTGAGTTAGAATGGCCAAAGAGAGTGGGAATTGTGAAAGGAGTTGCGCAAGCTTTGTCTTATATGCATCATGATTGTAACCCACCAATAATCCACAGAGACATATCAACCAAAAATGTATTATTGTCCCAAAATCTGGAAGCTCATGTCTCGGACTTTGGCACTGCAAGATTCCTGAAGCCAGATTCACCTATTTGGACTTCCTTTGCCGGCACATATGGCAATGCTGCTCCAGAGCTTGCATACACAATGGCAGTGACTGAAAAATGTGATGTGTTTAGCTTTGGTGTTTTGGCCTTTGAGATTCTCATGGGAAAACATCCTGGAGATCTAATTTCCCACATACAAACATCAAGTGCCCAGAACACCAACTTCAAAGAGATTTTAGACCCACGTCTGTCACCTCCTACAAATCAACAAAAATTAAAGGAATTGGCCTTGATAGGTAATCTGGCTATGTCTTGTCTACAAACCAACCCTCAATCTCGACCAACTATGCGAAGCATAACTCACATGCTTGACATGTAG 2823 0.4113 MDKPRIDDSLGVQAACLVFLALSAGTYGETETEALLRWKESLPDQAILESWVSPAQNSSAAQSPCSWRGIKCDNSSVNVIEINLAYTGLEGTLQNLNFSAFPNLLRLDLKTNNLVGSIPENIGVLSKLQYLDLSTNYLNGTLPISMANLTQVHELDVSRNNITGTLDPRLFPDGSDQPKTGLIGIRNLLFQDTLLGGRIPDEIGNIRNLTVLALDGNSFHGPIPPSLGNCTHLSVLRMSGNQLSGMIPPSFGRLTNLSEVFLHINNLDGPLPQEFGNISSLTVLHLAENNFTGELPPQVCKGGKLVNFSAAYNSFSGPIPISLRNCSSLYRARMEYNHLRGYADQDFGVYPNLTYMDFSYNNVQGELSSNWGSCKNLQYLGVSGNSIGGTIPGEIFQLNQLAELDLSSNQISGEIPPQIGNSSSLFTLSLSNNKLSGLIPASIGKLSNLQMLDLSDNMLKGSIPSEIGDCSNLLSLNLSNNALNGTIPYQIGNLAALQDLLDFSYNSLSGQIPSDLGKLKNLISLNISHNNLTGSIPNSLGEMLSLSSINLSYNTLEGHVPNSSIFNSSYPVDLRNNKGLCGNIQGLQPCNVSVREPGGGSNKKKVIAAIVGSVGGALLVSSVLVCIFVFVCKTRAMKQNSAPERKSPFSIWYFNGRIAYEDIIEATKNFDDTYCIGEGTLGKVYRVGMPGGQVVAIKKLKCEVDSLDIESIKSFKSEIEAMTETRHRNIVKLYGFCSDPLHTFLIYEYMERGSLSDMLRDDKKATELEWPKRVGIVKGVAQALSYMHHDCNPPIIHRDISTKNVLLSQNLEAHVSDFGTARFLKPDSPIWTSFAGTYGNAAPELAYTMAVTEKCDVFSFGVLAFEILMGKHPGDLISHIQTSSAQNTNFKEILDPRLSPPTNQQKLKELALIGNLAMSCLQTNPQSRPTMRSITHMLDM 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2026 940 ProSitePatterns Tyrosine protein kinases specific active-site signature. 795 807 IPR008266 GO:0004672|GO:0006468
Prci6g2026 940 SMART serkin_6 670 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2026 940 Gene3D Phosphorylase Kinase; domain 1 632 749 - -
Prci6g2026 940 Gene3D Ribonuclease Inhibitor 25 111 IPR032675 -
Prci6g2026 940 SUPERFAMILY RNI-like 106 564 - -
Prci6g2026 940 SMART LRR_typ_2 446 470 IPR003591 -
Prci6g2026 940 SMART LRR_typ_2 519 543 IPR003591 -
Prci6g2026 940 SMART LRR_typ_2 101 125 IPR003591 -
Prci6g2026 940 SMART LRR_typ_2 278 302 IPR003591 -
Prci6g2026 940 SMART LRR_typ_2 149 173 IPR003591 -
Prci6g2026 940 SMART LRR_typ_2 398 422 IPR003591 -
Prci6g2026 940 Gene3D Ribonuclease Inhibitor 266 593 IPR032675 -
Prci6g2026 940 Pfam Protein kinase domain 675 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2026 940 Gene3D Transferase(Phosphotransferase) domain 1 750 940 - -
Prci6g2026 940 SUPERFAMILY Protein kinase-like (PK-like) 645 938 IPR011009 -
Prci6g2026 940 Gene3D Ribonuclease Inhibitor 180 265 IPR032675 -
Prci6g2026 940 ProSiteProfiles Protein kinase domain profile. 670 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2026 940 FunFam Leucine-rich repeat receptor-like protein kinase TDR 275 592 - -
Prci6g2026 940 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 180 270 - -
Prci6g2026 940 FunFam MDIS1-interacting receptor like kinase 2 750 940 - -
Prci6g2026 940 FunFam Nuclear pore complex protein NUP107 28 171 - -
Prci6g2026 940 PANTHER LEUCINE RICH REPEAT KINASE 2 227 939 - -
Prci6g2026 940 PRINTS Leucine-rich repeat signature 401 414 - -
Prci6g2026 940 PRINTS Leucine-rich repeat signature 446 459 - -
Prci6g2026 940 Gene3D Ribonuclease Inhibitor 112 173 IPR032675 -
Prci6g2026 940 FunFam Leucine-rich repeat receptor protein kinase MSP1 633 749 - -
Prci6g2026 940 Pfam Leucine Rich Repeat 521 541 IPR001611 GO:0005515
Prci6g2026 940 Pfam Leucine rich repeat 400 459 IPR001611 GO:0005515
Prci6g2026 940 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2026 Prci-Chr6 20960274 20963731 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2026 2 843 Receptor kinase-like Gene Family AT4G08850 40.340 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci6g2026 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2026 - - aprc:113866080 1373.22