Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2020 ATGGCTAATGCAACTCGAAAACCATTAAGGAGCAATCAAGGAAGCCGAAGCAGAAAAGCAGGACTTGCAGATCAAGAAGGTCGAAATTGTCGCACTGTAAATGAAAGAAAGCAGAGGAGGAGAATGAAGAACAGAGAATCAGCTGCGACGTCAAGAGCTCGCAGGCAAAAATACATGATGGAATTGGAAGCGGAAGTTAAAAAGTTGAAAGATGAGAACCAAGAATTTCTGAGGAAACAAGAACACATGATGGAATTGGAAGCAGAAATTAAAAGATTGAAAGATGAGAACCAAGAAGTTGGGAAGAAGAAACAGGAATACGCAAGGGAATTAGAAGCAGAAATCAAAAGGTTGAAAGATGAGAACCAAGAAGCTCAGAGGAAGGAGGAGCAGGAATATCTGATGGAATTTAAAGCTGAAATTAAAAGGTTGAAAGATGAGAGCAGAGAAGTTATGAGGTCCAAGCATGAATATATGATGAAATTGGAGGCAGAAATCAAAATGTTGAAAGATGAGAACCGAGAAGTTCAGAGGTCAAAGCAAGAATATATGACAGAATTTGGAGCAGAAATTAAAAGGTTAAGAGATGAGAGCCAAGAAGTTCAGAGAGAAAACAAAAGGTTGAAAGATGAGAATCAAGAAGTTTGGAAGTCCAAGCAGGAATATATGATGGAATTTGGGGCAGAAATAAGAAGGTTGAAAGATGAGAACCGAGAATATACGATAGAATTGGAATCAGAAATCATAAGGTTAATAGATGAGAATCAAAAACTTCAAAAGAAGAATCAAGAGAATGAATCTTCCTTTGTTATTGTAAACAAGACAAGGCTTCCAACGAATCATGTACAAGTCAAGCAGGAACCGCTAGACTTTCCACCAGACCCAATTTTCTTCTCTCTTGAAGAAGACTGGAAAATATCTGATGAGCTCCTCAGATTATAG 942 0.38 MANATRKPLRSNQGSRSRKAGLADQEGRNCRTVNERKQRRRMKNRESAATSRARRQKYMMELEAEVKKLKDENQEFLRKQEHMMELEAEIKRLKDENQEVGKKKQEYARELEAEIKRLKDENQEAQRKEEQEYLMEFKAEIKRLKDESREVMRSKHEYMMKLEAEIKMLKDENREVQRSKQEYMTEFGAEIKRLRDESQEVQRENKRLKDENQEVWKSKQEYMMEFGAEIRRLKDENREYTIELESEIIRLIDENQKLQKKNQENESSFVIVNKTRLPTNHVQVKQEPLDFPPDPIFFSLEEDWKISDELLRL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2020 313 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 14 79 IPR043452 GO:0003700|GO:0045893
Prci6g2020 313 Pfam bZIP transcription factor 36 75 IPR004827 GO:0003700|GO:0006355
Prci6g2020 313 Gene3D - 34 78 - -
Prci6g2020 313 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 39 54 IPR004827 GO:0003700|GO:0006355
Prci6g2020 313 SMART brlzneu 32 99 IPR004827 GO:0003700|GO:0006355
Prci6g2020 313 Coils Coil 223 268 - -
Prci6g2020 313 Coils Coil 52 221 - -
Prci6g2020 313 SUPERFAMILY Leucine zipper domain 36 76 IPR046347 GO:0003700|GO:0006355
Prci6g2020 313 MobiDBLite consensus disorder prediction 21 55 - -
Prci6g2020 313 MobiDBLite consensus disorder prediction 1 55 - -
Prci6g2020 313 MobiDBLite consensus disorder prediction 1 19 - -
Prci6g2020 313 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 34 100 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2020 Prci-Chr6 20072428 20074763 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2020 33 87 bZIP Transcription Factor Family AT3G19290 61.818 7.53e-13 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci6g2020 bZIP_1 7.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2020 - K18626 pcin:129314541 613.609