Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2013 ATGACTGATTCATGGGTTCCTTCAGGGCAAAGCCCTCACTTTCATCACCCAACCGCTGGCATCATCAAGAGGGTTCGATTGGAGAACTTCATGTGTCATAGCAGCCTCGAGATTGAGCTTGGAGAGTGGGTCAATTTCATTACTGGTCAAAATGGAAGTGGCAAGAGCGCAATCCTAACTGCATTGTGTGTTGCATTTGGATGTCGAGCAAGAGGGACTCAGAGAGCAGCGACTCTGAAGGATTTTATAAAAACTGGCTGCAGTTATGCTGTTATCCATGTGGAAATGAAAAATGAAGGGGAAGATGCTTTTAAGCCACAAATATATGGTGATATGATCACCTTAGAACGTAGGATATCTGAATCCACGAGCTCCATTGTGTTAAAAGACTACAAAGGAAAGAAGGTTGCCAGTCGGAAAGCAGAACTCCAGGAAATGGTTGAGCATTTTAATATTGATGTGGAGAATCCGTGTGTAGTTATGAGCCAAGACAAAAGCAGGGAATTTTTGCATTCGGGAAATGATAAGGATAAATTTAAGTTCTTTTACAAAGCTACACTTCTTCAGCAAGTTGATGATCTTTTGGAAAGTGTTTCTAAAGGATTAGAGCATTCATTTGGACTTCTTGGAGGATTGGAGGCTACAATAAGGCCTGTAGAGAAGGAGCTTAATGAGTTGAGAGTCAAAATTACAAACATGGAACAAGTTGAACAAATATCACTGCAGATTCAGCAATTAAAGAAAAAACTTGCTTGGTCATGGGTTTATGATGTGGACAAGCAAATCCGGGATCAATATTCAAAGATTGATAAATTAAAGGATCGAATACCTACTTGCCAAGCCAAAATTGATGACCAACTGCATCGGGTTGAAGAGTTGAGGGCATATTTACATAATAAGAAAGGGCATATCAAAAACTTATTTGAAAAGACATCAGAAGTGAAGCAGAAGAAGCAAAATTTACAACAATCTATATCTATGGCTAGAAAAGAAGTACTTGAAAAAGAACAAGAGTGCAAACGCATAACTGTCAGTATTGAGAAGATGGTAAAGCGTGTTAGGACTCTTGAAGAACAGGTGCAGGATGTTTATGAGAAGCATGCACAAAGTACTCAGGCTGAAGAATCTGAGATAGAGGAGATACTGAAGGTGCTCCAAAACGAGGTTGCTGCTGCTGAATCAGCTCTGACAAGGTTGAGGGAAGAGGAAGCTACACTATCTGACGATGTTCAAAGACAAAGTAATGAAATAAAGAAGATTGCTGATGAAATTGAAGGACATGATAGACGTTATCGTGATATCAACTTTTCCATCCGTGAGCTTAAACAACACCAAACCAATAAGGTCGCAGCTTTTGGAGGAGATAGAGTGATGAACCTACTGCGTATTATTGAGAGAAGCTGTAGGAGGTTTAAGAGGCCACCTATTGGCCCAATTGGTGCCCATCTGAACCTGGTCAATGGTGATAAGTGGGGTGTTGCTATTGAGCATGCAATTGGGAAGATGCTGAATGCTTTTATAGTGACTGATCATAAGGATTCTCTTCTTTTGAGAGAATGTGCAAGGGAAGCAAACTATGGTCACCTCCAAATTTTTATTTATGATTTTTCAAGATCACGATTGTCTTTACCAACACACATGCTTCCCCAGACAACACATCCATCGATCCTTTCTGTTTTATATTCAGCGAATGACACTGTGATTAATGTCTTAGTGGATCTGGGGAGCATTGAGAGACAAATTCTTGTTAGGGATTATGATACGGGCAAAATGGTTGCATTTGATCAAAGGATTCCAAATCTGAAGGAGGTCTTCACCTCAGATGGATATAAAATGTTTTCTCGGGGCTCAGTGCAGACTGTTCTTCCCCCTAATAAGCGGCAGAGAACTAGTCGACTGTGTAGTTCTTTTGATAATCAAATTAATGTTCTTGAAGTTGATGCATCCCACGAACAAGAAGCAGCTAATCGCTTAAAGAGAAATAAAAGGGAGGCTGAAGAGAAGCTTGAGATTCTTGATAGGCAGCTAAGGCATGTAAAGAGGCTTTGTTCAAATGCAGTGAAGGATTTGTCTTCTAAGAAATTAGCATTCGAAGATGAGAAGAACCAGCATGCTATGGCAAATCAATCATCACCTGCATCATCTGTGGATGAGATTCAACAAGAAATTTCTGAAGTCCAACACGAAATACAAAGGAAGAGGGAATTGTTGAAAGAATGCCAGAGTAGGAAGAATGAAGCAGCAGTAAAGGCTGATAATCTTAAAGTATCCTTTGAAGAACTATGTGCATCGACACAAGAAGAGATCAGTGCCCTTGAGAAAACAGAGAATGAACTAATGCAGATTGAACGGGACATGCGTTCAGCAGAAGAGGAGAAGGCTCATTATGAAGGGATCATGCAACGCAAGGTACTCCCAGATATCAAGGAGGCAGAGGCACGCTACATGGAGCTTAAGCAGCAACGAGAGGAGTACAACAAAAAGGCTTCTATAATTTGTTGCGAGGATGAACTTCAATCTTTAGGTGGTTGTGATGGAAGCACACCAGAGCAAGTCAGTGCACAGATAGAAAGACTAGCTCAGAGACTCAAGCGTGAGAGCCAAAGATACACAGAATCATTAGATGATCTCAGGATGTTGTGTGAGAAAAAAGAACGCAAGATCATGAGAAAGCAGCAAGCTTACAAAGCCTATCGAACAAAGTTGAATGCTTGCCAGAGAGCCTTAGAATTGCGAAAGAACAAGTTTCGCAGAAATGCAACTCTTTTGAGGCGCTTGTTGTCTTGGAAATTTAATGCCCATTTGGGAAGAAAAGGATTCAGTGGACTTATCACAGTCAATTATGAAGAAAAATCCCTTTCAATCAAGGTGCAAATGCCTCAAGATGCATCGGGATGTGCTGTTCGTGACACACGAGGCCTTTCGGGTGGGGAGCGTTCTTTTTCAACATTATGCTTTACACTAGCCCTTCATGACATGACAGAATCCCCTTTCCGCGCAATGGATGAATTTGATGTTTTTATGGATGCAGTCAGTCGAAAGATTAGCTTGGATACTCTTGTGGATTTTGCTGTGGAACAAGGATCCCAGTGGATATTGATCACCCCACATGATATTAGTATGGTTAGGCAGGGAAACAGGATAAAGAAGCAGCAAATAGCAGCTCCCCGTTCTTGA 3177 0.4108 MTDSWVPSGQSPHFHHPTAGIIKRVRLENFMCHSSLEIELGEWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAATLKDFIKTGCSYAVIHVEMKNEGEDAFKPQIYGDMITLERRISESTSSIVLKDYKGKKVASRKAELQEMVEHFNIDVENPCVVMSQDKSREFLHSGNDKDKFKFFYKATLLQQVDDLLESVSKGLEHSFGLLGGLEATIRPVEKELNELRVKITNMEQVEQISLQIQQLKKKLAWSWVYDVDKQIRDQYSKIDKLKDRIPTCQAKIDDQLHRVEELRAYLHNKKGHIKNLFEKTSEVKQKKQNLQQSISMARKEVLEKEQECKRITVSIEKMVKRVRTLEEQVQDVYEKHAQSTQAEESEIEEILKVLQNEVAAAESALTRLREEEATLSDDVQRQSNEIKKIADEIEGHDRRYRDINFSIRELKQHQTNKVAAFGGDRVMNLLRIIERSCRRFKRPPIGPIGAHLNLVNGDKWGVAIEHAIGKMLNAFIVTDHKDSLLLRECAREANYGHLQIFIYDFSRSRLSLPTHMLPQTTHPSILSVLYSANDTVINVLVDLGSIERQILVRDYDTGKMVAFDQRIPNLKEVFTSDGYKMFSRGSVQTVLPPNKRQRTSRLCSSFDNQINVLEVDASHEQEAANRLKRNKREAEEKLEILDRQLRHVKRLCSNAVKDLSSKKLAFEDEKNQHAMANQSSPASSVDEIQQEISEVQHEIQRKRELLKECQSRKNEAAVKADNLKVSFEELCASTQEEISALEKTENELMQIERDMRSAEEEKAHYEGIMQRKVLPDIKEAEARYMELKQQREEYNKKASIICCEDELQSLGGCDGSTPEQVSAQIERLAQRLKRESQRYTESLDDLRMLCEKKERKIMRKQQAYKAYRTKLNACQRALELRKNKFRRNATLLRRLLSWKFNAHLGRKGFSGLITVNYEEKSLSIKVQMPQDASGCAVRDTRGLSGGERSFSTLCFTLALHDMTESPFRAMDEFDVFMDAVSRKISLDTLVDFAVEQGSQWILITPHDISMVRQGNRIKKQQIAAPRS 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2013 1058 Coils Coil 716 743 - -
Prci6g2013 1058 Coils Coil 808 828 - -
Prci6g2013 1058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 1048 IPR027417 -
Prci6g2013 1058 Gene3D - 819 1053 IPR027417 -
Prci6g2013 1058 Gene3D - 255 458 - -
Prci6g2013 1058 Coils Coil 346 366 - -
Prci6g2013 1058 Gene3D - 21 220 IPR027417 -
Prci6g2013 1058 SUPERFAMILY Methyl-accepting chemotaxis protein (MCP) signaling domain 277 444 - -
Prci6g2013 1058 Coils Coil 853 901 - -
Prci6g2013 1058 Coils Coil 755 799 - -
Prci6g2013 1058 Pfam RecF/RecN/SMC N terminal domain 22 1047 IPR003395 -
Prci6g2013 1058 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 17 1057 - -
Prci6g2013 1058 SUPERFAMILY Smc hinge domain 432 615 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Prci6g2013 1058 Coils Coil 304 338 - -
Prci6g2013 1058 Coils Coil 368 430 - -
Prci6g2013 1058 Coils Coil 641 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2013 Prci-Chr6 19885354 19932081 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2013 19 1058 Structural Maintenance of Chromosomes family AT5G61460 61.058 0.0 1249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2013 K22804 - zju:107414226 1392.48