Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2011 ATGAAACCTCCTCCTTTTTCTTCTTCTTCTCTTTTCCCTCTCACATTCTTCTTCTTCTTCTGTCATATACAGCTTCTGGTTTTCTCTGCCACACCTTCTGCCATTGTCTCTTTGCTTTCTCTCAAGTCTTCCCTCATTGACCCTCACAATACCCTCCATGACTGGAACTACTCATCATCCTCCCAAGACCCATCTGTTTGGTGTTCATGGTCAGGCATCATGTGCCACCCACGGACTTCCCAGATCATCACCATTGACCTCTCTCAGCGTAATCTCTCTGGTTTAATCTCTCCCCAAATCCGATTCTTGACCACCTTGAACCACTTGAATCTTAGCTGGAATGACTTCACTGGGATTTTCCCACCTGCAATTTTTGAACTCAGTGAACTTAGAACCCTGGATATCAATCACAACTACTTCAATTCAAGTTTTCCACCTGGGATTTCGAGGCTCAAGTTCTTGAGAGTGTTCAATGCTTATAGCAACAACTTCGTTGGTCCTCTGCCTCAGGAATTCATGAGGCTTCGGTTTCTTGAGAGGTTGAATCTTGGTGGGAGCTACTTCAACGGTACGATTCCTTCAGGTTATGGGAATTTACCCAGATTGAAGTCCCTTTATCTGGCTGGGAATCTCTTGGAAGGTCCAATACCATTTCAGTTGGGGTTTTTATCAGAATTGGAACGTCTTGAAATTGGGTATAACCAGTTTTCTGGAGGATTACCTGAAGAATTCGCATTATTATCAAGTCTGAAATACTTGGATATCGCCTCATCTAATATTTCTGGCTCTCTGATTCATGATTTGGGAAACATGACTATGCTTGAGACATTGTTGCTGTACAAGAATCAGTTAGTGGGCGAGATCCCATCAAGCTTGGGGAATTTGGAAAGTCTCAATGCTCTTGATTTGTCAGACAACAAACTCAGTGGGTCAATTCCGGAGGAAATTTCGATGTTGAAGGAACTGACCATTTTGAGCTTGATGAGCAACAAGCTAACGGGAGAGATACCACAAGGGATAGGAGATCTTCCAAAACTCGAAACTCTGCTTCTTTGGAACAATTCGCTTTCTGGTATTCTCCCACAAACCCTTGGCTCCAATGGATTGCTCCAGAAACTCGACGTGTCTACGAATTCACTCACAGGTCCAATCCCACCAAATGTTTGCAATGGAAGTAAGCTAATCAAGCTCATTCTCTTTAATAATGAATTTGAAGGAGCTTTTCCAGAATCATTCACGAAATGCACTTCACTACTAAGGCTTCGAATCCAAAATAATCGGCTCAATGGATCCATACCTGAGGGTTTTAGCCTTCTTCCTAATCTCGCCTTCGTCGATATGAGCAACAACAACTTCACGGGTCGAATCCCGGAAGATTTCGGTGATGCTCCGTCATTGCAAAACTTGAATATCTCTGGGAATTCATTCGAAAATCCACTACCAAGCAATATTTGGAACGCTAAAAATTTACTGGTTTTCTCGGCGATCTCATCTAAAATTAACGGTCAGATTCCAGATTTCATAGGGTGCAAGAGCATTTACAGAATCGAATTGCAGGGGAATTTCATCAATGGTAGCATTCCTTGGAGCATTGAGAATTGCGAGAGGCTTATTGTGCTGAATCTGAGTCGTAATTCGCTATCTGGTATCATTCCCTGGGAAATCTCTGCTTTACCCTCAATCACTGATGTTGACCTATCGCACAATTTTCTCTCCGGTACCATCCCCTCCGGTTTCAACAACTGCACCACACTCGAGAACTTCAACGTCTCCTTCAATTCCCTCACCGGACCTATTCCTTCTGCCGGTTCAATCTTCTCGAATCTCAATCCCTCTTCCTTCTCCGGCAACGACGGCCTCTGTGGCGGCGTCCTCGCAAAGCCCTGCGCCATGGACACTCCCTCCCCCTCAACGGAGCAACAACATGATCATCCCAGGAAAACTACTGGTGCAGTGGTGTGGATAGTTGCAGCGGCGGTGGCTGTCGGATTATTCGCGCTAGTCGCCGGAACACGGTGCTTCCGATCTCATCACAGCGGTCCGTTTATGAACAACCGCGAGATCGGACCTTGGAAATTGACCGCGTTCCAACGGTTGAATTTTACAGCAGAGGACGTGGTAGAGTGCATGACAGTCTCAAACAAAATCATCGGAATGGGGTCCACAGGAACAGTGTTCAAAGTGGAGATGCCAAGTGGCGACATCATAGCCGTTAAAAAACTTTGGGGCAAGCAAAAGGAGAGCTCTAACTGCATCCGACGGCGGAGAGGGGTTCTTGCTGAAGTGGACGTATTAGGGAACGTGAGACACAGGAACATAGTGAGATTGTTAGCGTGTTGCAGCAACAGGGAGAGCACCATGTTGCTCTATGAGTATATGCCCAATGGGAATTTAGAAGACTTGTTGCATGGCAAGAATGTGGTTGGTGATTGGTTGACAAGATATAAGATTGCATTGGGGGTGGCACAGGGGATTTGTTATCTCCATCATGATTGCAATCCAGTGATCGTGCACCGAGATCTTAAACCGAGTAATATTTTGTTGGATGCTGAGATGGAGGCTAGAGTGGCAGATTTTGGAGTGGCCAAGTTGATTCAGAGTGATGAATCCATGTCTGTTATTGCTGGATCCTATGGCTACATTGCACCTGAATATGCATACACTCTACAAGTTGATGAGAAGAGTGATATTTACAGCTATGGTGTGGTGTTGTTGGAGATTCTATGTGGAAGAAGATCTGTCAATGCTGAGTTTGGTGAAGGAAATAGTATTGTCGATTGGGTTAAGTCCAAGATCAAAACTAAAAATGGGATTAATGACATATTAGATAAGAATATCGGGGCCGGGTGTGCACCAGTAAGGGACGAGATGATGCAGATGCTCAGGATCGCGCTGCTTTGTACCAGCCGGAATCCGGCGGATCGGCCTTCCATGAGAGATGTTGTGCTGATGCTTCAAGAGGCCAAGCCAAAGAGGAAGATGTTTGATAATATTGTGTTGGGTCAATGCGGTGATAAAGATATTGGCAGTGGGGAAGATGATGATATTGTTTTGCCACAGAAGGCAAAAGTGGAAATTTAG 3081 0.4505 MKPPPFSSSSLFPLTFFFFFCHIQLLVFSATPSAIVSLLSLKSSLIDPHNTLHDWNYSSSSQDPSVWCSWSGIMCHPRTSQIITIDLSQRNLSGLISPQIRFLTTLNHLNLSWNDFTGIFPPAIFELSELRTLDINHNYFNSSFPPGISRLKFLRVFNAYSNNFVGPLPQEFMRLRFLERLNLGGSYFNGTIPSGYGNLPRLKSLYLAGNLLEGPIPFQLGFLSELERLEIGYNQFSGGLPEEFALLSSLKYLDIASSNISGSLIHDLGNMTMLETLLLYKNQLVGEIPSSLGNLESLNALDLSDNKLSGSIPEEISMLKELTILSLMSNKLTGEIPQGIGDLPKLETLLLWNNSLSGILPQTLGSNGLLQKLDVSTNSLTGPIPPNVCNGSKLIKLILFNNEFEGAFPESFTKCTSLLRLRIQNNRLNGSIPEGFSLLPNLAFVDMSNNNFTGRIPEDFGDAPSLQNLNISGNSFENPLPSNIWNAKNLLVFSAISSKINGQIPDFIGCKSIYRIELQGNFINGSIPWSIENCERLIVLNLSRNSLSGIIPWEISALPSITDVDLSHNFLSGTIPSGFNNCTTLENFNVSFNSLTGPIPSAGSIFSNLNPSSFSGNDGLCGGVLAKPCAMDTPSPSTEQQHDHPRKTTGAVVWIVAAAVAVGLFALVAGTRCFRSHHSGPFMNNREIGPWKLTAFQRLNFTAEDVVECMTVSNKIIGMGSTGTVFKVEMPSGDIIAVKKLWGKQKESSNCIRRRRGVLAEVDVLGNVRHRNIVRLLACCSNRESTMLLYEYMPNGNLEDLLHGKNVVGDWLTRYKIALGVAQGICYLHHDCNPVIVHRDLKPSNILLDAEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLLEILCGRRSVNAEFGEGNSIVDWVKSKIKTKNGINDILDKNIGAGCAPVRDEMMQMLRIALLCTSRNPADRPSMRDVVLMLQEAKPKRKMFDNIVLGQCGDKDIGSGEDDDIVLPQKAKVEI 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2011 1026 Pfam Leucine rich repeat N-terminal domain 37 75 IPR013210 -
Prci6g2011 1026 Pfam Protein kinase domain 714 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2011 1026 FunFam Leucine-rich repeat receptor-like protein kinase 33 194 - -
Prci6g2011 1026 Pfam Leucine rich repeat 513 569 IPR001611 GO:0005515
Prci6g2011 1026 Pfam Leucine rich repeat 393 452 IPR001611 GO:0005515
Prci6g2011 1026 ProSiteProfiles Leucine-rich repeat profile. 297 319 IPR001611 GO:0005515
Prci6g2011 1026 ProSiteProfiles Protein kinase domain profile. 711 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2011 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Prci6g2011 1026 Pfam Leucine Rich Repeat 106 124 IPR001611 GO:0005515
Prci6g2011 1026 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 217 312 - -
Prci6g2011 1026 Gene3D Transferase(Phosphotransferase) domain 1 793 1001 - -
Prci6g2011 1026 ProSitePatterns Protein kinases ATP-binding region signature. 717 740 IPR017441 GO:0005524
Prci6g2011 1026 Gene3D Phosphorylase Kinase; domain 1 685 792 - -
Prci6g2011 1026 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 681 792 - -
Prci6g2011 1026 SMART LRR_typ_2 127 151 IPR003591 -
Prci6g2011 1026 SMART LRR_typ_2 439 462 IPR003591 -
Prci6g2011 1026 SMART LRR_typ_2 199 220 IPR003591 -
Prci6g2011 1026 SMART LRR_typ_2 223 246 IPR003591 -
Prci6g2011 1026 SMART LRR_typ_2 295 319 IPR003591 -
Prci6g2011 1026 SMART LRR_typ_2 343 366 IPR003591 -
Prci6g2011 1026 SMART LRR_typ_2 558 581 IPR003591 -
Prci6g2011 1026 PANTHER OS04G0122200 PROTEIN 439 981 - -
Prci6g2011 1026 FunFam Leucine-rich repeat receptor-like protein kinase TDR 316 631 - -
Prci6g2011 1026 Gene3D Ribonuclease Inhibitor 322 635 IPR032675 -
Prci6g2011 1026 SMART serkin_6 711 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2011 1026 FunFam leucine-rich repeat receptor-like protein kinase TDR 793 997 - -
Prci6g2011 1026 SUPERFAMILY L domain-like 66 384 - -
Prci6g2011 1026 SUPERFAMILY RNI-like 279 610 - -
Prci6g2011 1026 Gene3D Ribonuclease Inhibitor 35 318 IPR032675 -
Prci6g2011 1026 SUPERFAMILY Protein kinase-like (PK-like) 714 985 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2011 Prci-Chr6 19865851 19870635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2011 16 993 Receptor kinase-like Gene Family AT1G08590 42.361 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci6g2011 Pkinase 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2011 - - pcin:129315664 1488.4