Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2008 ATGAACCTGATGGAGAGAGTAACAGAAGAAAGAGAAGATGAAGAAGATGAGGAGGGTGACGTATTTGAGAGGTTTCTTCATGTTGCATGTGCTCTGTATCATGCACACAGCAACTTCGACGTGATGTTCATCAAAGTCGATCCTATGATTGTGCATGGTCCATATGAATATGAATCAATTAAAGAGATTGTGAAAGAAATCTCTGACATAATCAATAGTAGTCTCCCGTTACATATTGAGGATGATCTTGTTGGAATATCCCATAGATTGCAAAAAATAAAGTCTCAATTACAACTTGGATCAAAAGAAGAGGTCATCATGTTTGGAATTTATGGAATAGGGGGCATGGGTAAAACAACTATAGCACGTGTCATGTATAACTCATTGACAGATAATTTTGAAAGTTCATGCTTTCTCAGTGACATTAAAGCAAACTCAAGTAGCTTAGAAAGAATGCAAGAGAAAATGCTTTCACACATTTTAGGGGTGGAGATAAAAATTGAAGATGTAAACAAAGGAGTTGCAATTATAAAAAAGAGGCTCAAACGAAAAAAAATCCTTTTGATTCTTGATAATGTTGATGGGGACGAGCAATTGCAAAAGTTAGCTGGTAATTGTGATTGGTTTGGTATTGGTAGTAGGATCATTATTACGACAAGGGACAAGCATTTACTCGTAAACCATGGAGTTGAGAGAAAATATGAGATGGAGGCATTGAATGATGAAGAATCTCTTGAATTATTAACTTTGAAAGCCTTTGGAAGCAAGCAAGTTCATGCAAGTTACAAGGAAGTTGTGGAAAAGGTGATGTGTTATGTGCAAGGTCTTCCCTTAGCACTTGAAGTTATAGGCTCCAACTTGAAAGGAAAGTCAATAAAGGAGTGGGAATCTGCATTAAATTTGTATAAAAGAATTCCTGATAAAAACATTCATCAAACATTGAAAGTAAGCTATGATGGCTTAGGGCAAGCTGAAAAAGAAATTTTTCTTGATATTGCTTGCTTCTTCAATGAACTCTTCAAAGCAAGATCATTGAACGATGTCAAAGAAATGGAGAAACATGTTCACAATTTTGATCCAAACTATAGCATTAGTGTGTTGTTAGACAAATGCCTGATAAAGATTGAGGTTGATTATATCAAGATGCACGATTTAATACAAGCTATGGGAAGAGAAATTGTTCGACAAAAATCACTAAAGGAGCCTGGAAGACACACTAGATTATGGCTGGACCAAGATATTGTTCAAGCTTTGGAAAAAAATATACTTCGACAAACGGCCTCGACTCTGAGTGTTTTGAATCTCAAAAAGTGCCAAAATATTACACAAATACCGAATTTACCTGCCCTCCCAAATTTAAAAGAATTAAATCTTGCTGGATGCAAGAATTTAATTGCCATTGATGATTCGCTCTGTCTTTCATACTGCTCAAGCCTGAAATACTTTCCAGAAATACTAGAGAAAGTGCAACTAACACAATTGGAGTTGAGGGAAACTGGGATAGAAAAACTGCCTCCATCAATTTGCAATCTTATTAACCTTTTTAATATAGAAATTAGTGGGAAAATCGAGCCACCAAGTATGAATTTTTTGTTGCCAGAACAATATGAGAATTTTGATGAAGGTTATGGAAAGTTGCTGAAGGAAGTGATTCCATTTCGAAGATTAAGTTTTGTTAACCTCAGAAATGTTTTTGGAGGCACTTTCTTTAAATGGGTGCAAGTATTTGCAAGAAGTGGAAGGAATTCCACCAAACATAGGAGTGTTGGATGCAACAGATTGCATAATGTTGAGTTCAGAGTCGAGAAACTTTTTGTTGAGTAA 1824 0.3569 MNLMERVTEEREDEEDEEGDVFERFLHVACALYHAHSNFDVMFIKVDPMIVHGPYEYESIKEIVKEISDIINSSLPLHIEDDLVGISHRLQKIKSQLQLGSKEEVIMFGIYGIGGMGKTTIARVMYNSLTDNFESSCFLSDIKANSSSLERMQEKMLSHILGVEIKIEDVNKGVAIIKKRLKRKKILLILDNVDGDEQLQKLAGNCDWFGIGSRIIITTRDKHLLVNHGVERKYEMEALNDEESLELLTLKAFGSKQVHASYKEVVEKVMCYVQGLPLALEVIGSNLKGKSIKEWESALNLYKRIPDKNIHQTLKVSYDGLGQAEKEIFLDIACFFNELFKARSLNDVKEMEKHVHNFDPNYSISVLLDKCLIKIEVDYIKMHDLIQAMGREIVRQKSLKEPGRHTRLWLDQDIVQALEKNILRQTASTLSVLNLKKCQNITQIPNLPALPNLKELNLAGCKNLIAIDDSLCLSYCSSLKYFPEILEKVQLTQLELRETGIEKLPPSICNLINLFNIEISGKIEPPSMNFLLPEQYENFDEGYGKLLKEVIPFRRLSFVNLRNVFGGTFFKWVQVFARSGRNSTKHRSVGCNRLHNVEFRVEKLFVE 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2008 607 SUPERFAMILY "Winged helix" DNA-binding domain 309 419 IPR036390 -
Prci6g2008 607 Gene3D Ribonuclease Inhibitor 374 563 IPR032675 -
Prci6g2008 607 Gene3D - 238 322 IPR042197 -
Prci6g2008 607 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 426 520 IPR044974 GO:0006952
Prci6g2008 607 PRINTS Disease resistance protein signature 448 464 - -
Prci6g2008 607 PRINTS Disease resistance protein signature 273 287 - -
Prci6g2008 607 PRINTS Disease resistance protein signature 180 194 - -
Prci6g2008 607 PRINTS Disease resistance protein signature 107 122 - -
Prci6g2008 607 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 332 IPR027417 -
Prci6g2008 607 Gene3D - 64 231 IPR027417 -
Prci6g2008 607 SUPERFAMILY L domain-like 426 522 - -
Prci6g2008 607 Pfam NB-ARC domain 89 303 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2008 Prci-Chr6 19770177 19774892 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2008 84 409 WRKY Transcription Factor Family AT5G45050 32.229 4.70e-44 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2008 - - pcin:129313975 1150.19