Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2002 ATGGCCATTTGCGTGTTTTCTAAGGGCTATGCTTCCTCAACATTTTGCCTCAACGAACTCGTTAAGATCCATCAGTGTATTAAGGAAAATGGACGACTAGTTTGGCCCATCTTTTATCATGTGGATCCTTCTGAAGTACGACATCAAAAAGGAAATTACGAACAAGCATTGACTATGCATAAACAGAATTTAAAGGCTAATGAAGAGAAGGTGCAAAGTTGGAAGCTTGCATTGCGTGAAGTAGCTAATATTTCTGGCACACATCTCACTCCTGGGCATGGTTATGAATATGAAATCATTGAAGGTATTGTGAAAGAAATATCTCGCATAATCAATAGGGCTCCTTTACATGTCGCTGAATATCCAGTTGGATTAGATACTCGTTTGCAAAAAGTAAACTCTCTATTGCAATTTGAGTCTCGTGATGAGGTCATTATGGTAGGAATTTACGGAATCGGGGGATCAGGTAAAACAACATTAGCACGGATTGTGTATAACTCAATAGCAGATAATTTTGCAGATTTGTGCTTTCTCTGTGATATCAAAGAAAATTCAAGGAAATTTGGGTTAGAAGGAATGCAAAAGAGAATGCTTTCAAAGATTTTAGGAGTGGACATAGAAATTGATGATGTTAATGAAGGAGTTGCAATAATTAAAGAGAGACTCAGACAAAAGAGAATTTTGTTGATTCTTGATAATGTTGATGAGCTAGAGCAATTACAAAAATTTGCTGGCCATAGTAGTTGGTTTGGTTCTGGGAGTAGGATCATTATAACAACAAGGGACAAACATTTACTCATGAGACATGGGGTTGAAAGCAAATATGAGATGGAGGCACTCACTGATAACGAATCTCTTCAATTATTAAGTTGGAATGCCTTCAATAGTACACAAGTTGATCCAAGTTACATAGAAGTTGTGGATCGTGTGATACACTATGCCCATGGTCTTCCATTGGCCCTTGAATTAATAGGCTCTCACTTGTTTGGTATGGGTATAAAGGAGTGGCAATCTGCTATAGATGTGTATGAGCGAATTCCTCATAAAGACATTCAACGAATACTACAAGTAAGCTATGATGGCTTAACTGAAGCTGAAAAGGATATTTTTCTTGACATTGCTTGTTTCTATAAAGGATGTTGGTTGGAAAAAGTCATAGATATGGTGAAATATGCTCATGGTTTTGATCCACATCATGGTATTCAAGTATTGACAGACAAATGCCTCATAAAAAATGAATATGATCGTGTTGATATCCATGACTTGATACAAGATATGGGAAGAGAAATTGTTCGTCAAGAATCACGACAGGAGCCTGGAAAACGTAGTAGATTATGGTCCCATGAAGATATCATGCATGTTTTGGAAGAAAATACAGGGACAAATAACGTTAGGATCATAGCTTCAGAAAATGTTTCCCAATATAAAGAAGTGAGTTGGGACGGAAAAGCCTTGGAGAAAATGAAAAATCTCAAAATTCTTAGTTTAAAGAATTTAAAGTTTTCAGAAGGCCCCAAATATCTGCCTGACAGTTTAAAAGTGCTAGAATGGGGAGAATATCCTTCATCATCTCTGCCACACAACTTTCATGCAAGGGAACTTTTTGTAATGAATGTGCCACATAGTCTTTTAAAGTCAGTGGAATTTAAGACGGCCTTGAATCTAAGTGTTTTGAATCTTCAAGGATGCCAAAATATTACACAAATACCTGATTTATCTGGCATCTCAAATTTAAAGGAATTAAATCTTTGGGGATGCATGAATTTAATTGCCATTGATGATTCGGTTGGAGAATTAGAAAGACTTGAAATCTTGGATGTGTATGGATGTGCCAAACTTGAAACCATTCCCCGTTGTACCAAGTCACTATATCTTAAATTCCTTGATCTTGGGAATTGCTCAAGCTTGAAGTACTTTCCAGAAATACTACCAAAAGCGCCACTAATAGAAGTGACTATGCGGGGTAGTGGGATAGAAAAACTGCCTGCATGCATAAAAGAATGCACGTCTTTGGAGGAACTTTGGCTACAAGAGTGCGAGCATCTGCAAGAAGTGGAAGGGATTCCACCAAACCTGAAAGTGTTGTACGCAAACGATTGCATATCGTTGAGTTAG 2115 0.374 MAICVFSKGYASSTFCLNELVKIHQCIKENGRLVWPIFYHVDPSEVRHQKGNYEQALTMHKQNLKANEEKVQSWKLALREVANISGTHLTPGHGYEYEIIEGIVKEISRIINRAPLHVAEYPVGLDTRLQKVNSLLQFESRDEVIMVGIYGIGGSGKTTLARIVYNSIADNFADLCFLCDIKENSRKFGLEGMQKRMLSKILGVDIEIDDVNEGVAIIKERLRQKRILLILDNVDELEQLQKFAGHSSWFGSGSRIIITTRDKHLLMRHGVESKYEMEALTDNESLQLLSWNAFNSTQVDPSYIEVVDRVIHYAHGLPLALELIGSHLFGMGIKEWQSAIDVYERIPHKDIQRILQVSYDGLTEAEKDIFLDIACFYKGCWLEKVIDMVKYAHGFDPHHGIQVLTDKCLIKNEYDRVDIHDLIQDMGREIVRQESRQEPGKRSRLWSHEDIMHVLEENTGTNNVRIIASENVSQYKEVSWDGKALEKMKNLKILSLKNLKFSEGPKYLPDSLKVLEWGEYPSSSLPHNFHARELFVMNVPHSLLKSVEFKTALNLSVLNLQGCQNITQIPDLSGISNLKELNLWGCMNLIAIDDSVGELERLEILDVYGCAKLETIPRCTKSLYLKFLDLGNCSSLKYFPEILPKAPLIEVTMRGSGIEKLPACIKECTSLEELWLQECEHLQEVEGIPPNLKVLYANDCISLS 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2002 704 Gene3D - 279 363 IPR042197 -
Prci6g2002 704 PRINTS Disease resistance protein signature 221 235 - -
Prci6g2002 704 PRINTS Disease resistance protein signature 314 328 - -
Prci6g2002 704 PRINTS Disease resistance protein signature 597 613 - -
Prci6g2002 704 PRINTS Disease resistance protein signature 146 161 - -
Prci6g2002 704 Gene3D - 1 111 IPR035897 -
Prci6g2002 704 SUPERFAMILY "Winged helix" DNA-binding domain 350 456 IPR036390 -
Prci6g2002 704 Pfam TIR domain 2 107 IPR000157 GO:0007165
Prci6g2002 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 373 IPR027417 -
Prci6g2002 704 SUPERFAMILY L domain-like 470 703 - -
Prci6g2002 704 Gene3D Ribonuclease Inhibitor 406 704 IPR032675 -
Prci6g2002 704 ProSiteProfiles TIR domain profile. 1 111 IPR000157 GO:0007165
Prci6g2002 704 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 688 IPR044974 GO:0006952
Prci6g2002 704 SMART AAA_5 143 281 IPR003593 GO:0016887
Prci6g2002 704 Pfam NB-ARC domain 129 362 IPR002182 GO:0043531
Prci6g2002 704 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 86 IPR035897 -
Prci6g2002 704 Gene3D - 112 273 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2002 Prci-Chr6 19695242 19700741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2002 12 703 WRKY Transcription Factor Family AT4G12020 31.520 5.23e-87 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2002 - - pcin:129312772 1416.36