Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1990 ATGCAAGTTCATGCAAGCCACAAGGAAGTTGTGGAAAATTTGATACATTATGCACAAGGTCTTCCCTTAGCACTAGAAGTTATAGGCTCTAACTTGCAAGTCATACATACATATCAAACTCCTAATATTTATGATTTGCTTTTATTTTTGGCTAAGGGATCAGAAGAAGTTGGTATTATAATTTCAAGAGATCAATCCAAATGTATAGAAGTGAATTGGGATGGAAAAGCCTTCAAGAAGATGAAGAATCTCAAAATTCTTATGTTGAATGAGAATATGAAGCTTTTAGAAGGCCCCAAATATCTACCTAATAGTTTGAAAGTGTTGAGATGGCCGAGATATCCTTCATCATGTTTGCCACTCAACTTTCATCCAAAGGAACTTTTTGAATTGGATATGGGACTTGGTTGTCTAAAGTCAGTAGAAATGATTAAGAATGTCTCAAATCTAAGTACTTTGAATCTTGGATATTGCCATTACATTACACAAATACCTAATTTATCTGGCCTCTCAAATTTAAAGGAATTGTGTGTTTATGGATGCCAAAATTTAATTGCAATTGAGGATTCTGTTGGAGAATTAACAAAACTTGAAACCTTGAATGTGCAAGCATGTGCCAAACTTAAAACCTTTCCCCACGGTATCAAGTCACCGTATCTTCAAAGGCTCGAACTTACTGGTTGCAAAAGCCTAAAGTGCTTTCCAGAAATACTAGAGAAAGTGCAACCAACTGAACTGTCTTTTTGGGAAACTGGAATGGAAGAACTTCCTTCAACTATTTGCAATCTTACTCAACTTGAGGGGGTAACAATTAGTGGGAAAGTTAAGCCACCAAATATGGATTTTCTGTTGCGAGGACAATGTGATAATGTTGATGAAGGTTGTGGAAAGTTGCTGAAGGAAGTGATTCTATTTCCAAACTTAGATATTGTTGACCTCACAGAATGTAATATATCAAGCAGGAAGAGCCTTCAAAGTTATCTTTCTTGGTTCTCCACCATGAGAGAGTTGGACTTGAGCAACAATGACTTTATTACAATTCTGCCAGCATGCATAAAAGAATGTCGCTTTTTGTGGAGGCTTAGTTTACTTTGGTGCAGGCATCGGCGAGAAGTGGAAGGGATTCCACCAAACATAAGACAGTCGGATGCAGAAGGTTGCATATCATTGAGTTTAGAGTCGAGAAACTTAATGTTGAGTGAGGTCATTAATTTTTCTGCCTCTGATTTTCTGAACATCTCTGTTAAGTATTTATGTGACTCTATATATATATGTTTCTCAACATTTATTTTTGTTTCACAGCAGCTAATTATTGGGGCTGTAGTGATCAGAGATGTGGAGATTGTTGATGATGAGTGTTTTGAATTTCTGAAAACAGAATTCGTTGTGCCAGCATCAAGCATTCCAGAATGGTTCCATCACTGTAGCAAAGGAGCACCTTTGTCATTTTGGTTTCGTAACTCCTTTCCAACTCTATGTCTTTGTGCTCTTCTCAAATTTAATGGTGACATGGCTTGTAAACATACATTTATACATGCGGTCCCTAAAGCAGTAATTAATGGAGAAAGAATATCTACGATATTGGACAAATATGATGCTACATTGTGGTCAGGAAGTTTATGGGATCACGAACATATAATCATCTGTGATCTTCGAGAGGAATACTTTGATGGAGATGATAAAGTAATTGATGGATTATAA 1701 0.3651 MQVHASHKEVVENLIHYAQGLPLALEVIGSNLQVIHTYQTPNIYDLLLFLAKGSEEVGIIISRDQSKCIEVNWDGKAFKKMKNLKILMLNENMKLLEGPKYLPNSLKVLRWPRYPSSCLPLNFHPKELFELDMGLGCLKSVEMIKNVSNLSTLNLGYCHYITQIPNLSGLSNLKELCVYGCQNLIAIEDSVGELTKLETLNVQACAKLKTFPHGIKSPYLQRLELTGCKSLKCFPEILEKVQPTELSFWETGMEELPSTICNLTQLEGVTISGKVKPPNMDFLLRGQCDNVDEGCGKLLKEVILFPNLDIVDLTECNISSRKSLQSYLSWFSTMRELDLSNNDFITILPACIKECRFLWRLSLLWCRHRREVEGIPPNIRQSDAEGCISLSLESRNLMLSEVINFSASDFLNISVKYLCDSIYICFSTFIFVSQQLIIGAVVIRDVEIVDDECFEFLKTEFVVPASSIPEWFHHCSKGAPLSFWFRNSFPTLCLCALLKFNGDMACKHTFIHAVPKAVINGERISTILDKYDATLWSGSLWDHEHIIICDLREEYFDGDDKVIDGL 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1990 566 SUPERFAMILY L domain-like 64 404 - -
Prci6g1990 566 ProSiteProfiles Leucine-rich repeat profile. 149 171 IPR001611 GO:0005515
Prci6g1990 566 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 67 316 IPR044974 GO:0006952
Prci6g1990 566 Gene3D Ribonuclease Inhibitor 69 245 IPR032675 -
Prci6g1990 566 Gene3D Ribonuclease Inhibitor 246 414 IPR032675 -
Prci6g1990 566 PRINTS Disease resistance protein signature 192 208 - -
Prci6g1990 566 PRINTS Disease resistance protein signature 18 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1990 Prci-Chr6 19545100 19549624 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1990 78 349 WRKY Transcription Factor Family AT4G12020 30.769 1.19e-23 104