Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1987 ATGACAACACAAGCATCAACATCATCTCCCATCCATGATCATTGGAATTATGATGTCTTTATCAATTTTAGAGGAGGAGATACTCGTTATGGCTTTACTGGAAATCTGTATAAAGCTCTAGATGAAAAGGGAATTCACACCTTCTTTGATGATAGGGAAATAAGAATGGGCGATGAAATTGATCCAAAACTTCATGAAGCAATCGAAGAATCTAGGATGTTCATCTGTGTGTTTTCTAAAGACTATGCGACCTCAAGATTTTGTCTTGATGAACTTGTCCACATCCATCAATGTTCTAAGAGAGATGGACGACGAATTTGGCCAATATTTTATGATGTGGAGCCATCAGAAGTGCGACATCAAAAAGGAAACTATGCACGAGCTTTAGATAAATATAAAAGTAAAAACAGAGCTGATGAGAACAAGATGGAAAATTGGAAGGCTGCACTACGTGACGTGGCAAATATCTCCGGCAAACATTTCACACCTGGTAGGATCATTATTACGACGAGGGACATGCAGTTACTTGCAAAACATGGAATTAAGAGAAAATATGAGATGGAGGCATTGAATGATAAAGAATCTCTTGAATTATTAAGTGGGAAAGCCTTTAGAAGTATGCAAGTTCCTGCAAGTCACAAGGAAGTTGTCAAAAATTTGATGCATTATGCACAAGGTCTTCCCTTAGCACTAGAAGTTATAGGCTCTAACTTGCAAGGTAAGACAGTAAGGGAGTGGGAATCTGCATTAAATCAATATGAAAGAATTCCCAATAAAAAAATTCATCAAATATTGAAAGTAAGCTATGATGGCTTGGAACTATTTGAAAAAGAAATTTTCCTTGATATTGCTTGCTTCTTCAATGAACTCTTCAAAGGAAGATCATTGAACTATGTCAAAGAAATGGAGGAACGTGTTCACAATCTTGATCCACACTATAGTATTAGTGTGTTGGAAGACAAATGCCTCATTAAGACTGAGGTTGATCGTATTAGGATGCACGATTTAATACAAGATATGGGAAGACAAATTGTTCATCAAGAATCGCCAAACAGGCCTGAAAAACGCACCAGATTATGGCTCAATCAAGATATTGTTCAAGTTTTGGAAGAAAATACAGGCACAAATAAAGTTAGGATGATAGCTTCAGAAAATTTGTCCAAATGTAGAGAAGTAATTTGGGACGGAAAAGCCTTTGAGAAAATGAAAAATCTCAAAATTCTTTGTTTTAAGAATTTAAAGTTTTCAGAAGGCCCCAAATATCTACCCAATAGTTTAAAAGTGCTAAAATGGGAAGAATATCCTTCATCATCTCTGCCACCCAACTTTCGTGCAAGGGAACTTTTTGTAATGAATGTGCCACATAGTCGCTTAAAGTCGGTGGAATTCAAGATGGCCTTGAATCTAAGTGTTTTGAATCTCAAAGAATGCCAAAATATTACACAAATATCTGATTTATCTGGCATCTCAAATTTAAAGAAATTAAATCTTCATGGATGCAAGAATTTAATTGCCGTTGATGATTCGGTTGGAGAATTAGAAAGACTTGAAGTCTTGAATGTGGAAAAATGTGCCAAACTTAAAACATTTCCCCATTGTATCAAGTCACCGTGTCTTAAATCGCTCGATCTTTCACAATGCTCAAGCTTGAAGTACTTTCCAGAAATACTACCGAAAGTGCCACTAAGAACACTGGATGTGTGGGGTAGTGGGATAGAAAAACTGCCTGCATGCATAAAAGAATGCATGTCTTTAGAGGAATTTTGGTTAAGTGAGTGCAAGCATCTGCAAGAAGTGGAAGGGATTCCACCAAACTTGGAATGGTTGGTTGCACAAAATTGCGTATCGTTGAGTTTAGAGTCGAGAAGCTTATTGTTGAGTAAGGAAGTAATTGGGGCTGGAATAAGAAAACATGGGGCTTGTTGCTCTAAAAACTTTGTCATGCTGGGATCAATTATCCCAGAATGGATGGATGTCTGTAAGAAAGGAGGATCTATTTCTTTTTGGTTTCGTAATGTCATTCCAACTTTTTGTTGTTGTGCTCTTCTCACACCAAGTGCTGATTATGAATGCGATTTCGACTTTGGGATGCGCATTAATGGAATACTAGTAAATGTGCGAATCAACGGGCGTGTATTTCACAATATTTCCCTAATTAAAGAGGACTCTATATTTCTCTGTATACCGGATCGGGACAAAGATTATGAAAGGAGACAAGTATTGAAAGGTGGTGTGTGGAATAATGCAGAGATTTCAATCCGGCAGCATTCTTCGGATTTGGGTGGTGTAAAGGAGAGTGGAATTTATATGATAAGACAACATTGTAACATGGAAGATATCCGATTCACTGGTCCCTTAAATTTGGATTCCCTGAATATTGACCAAGAATGTATGGAACATTTGGCTGAATATCTGGAAACGGTGTTTGATTTGTCAAAAAGTAGCTGCAGAGATTGGGTTGAATGTATGCGGGAGGAAAGCATCCCAGAATGGTTTCACAAGCGCACTAAAGGACAAGATGTTTCTTTTTGCTTTCGTAACAACTTTCCAACTCTCTATGGTGGTGCTCTTCAAAATTCCGACTATAATCGGCTCCACCCACTTTCAATCTCGATAAATGGATGTCACTTTTGTAAAGCATATTATTCCTCATTGAAACTTGGTAATACAGTTGTGTATGGTCTACAATTGGCCTCCTTTGACGAGAAAGAAATGAAACGAGCATTTCGAGAAGGTGAGTGGAATTATGTAAAGATCCGTGTGTACGATGCAAAAGAGAGCGGAATCTATGTAACAGGACAACAATATAATAAGGAAGACATCCGATTCACTGATCCTGATATGGATGCCATGGCTAATCAAGAGAGCTGGTGTCGTTTAGAGAGCTGGTGTGGTCTTGATGATGATGATGATGATGAGGATGAGGACGAGGATGAGGATGTTGAAGGAGAGCAACCAATGCTAAAAAAGAGGTGGTTGATGGAGGATAACCATGTTATTTCAATAAGTTCTTATATATATATATTGAATTTGAATATTTTTAATCACTTTATATATCCTTTACCTTCCGTGTTAATTAATTAA 3084 0.3742 MTTQASTSSPIHDHWNYDVFINFRGGDTRYGFTGNLYKALDEKGIHTFFDDREIRMGDEIDPKLHEAIEESRMFICVFSKDYATSRFCLDELVHIHQCSKRDGRRIWPIFYDVEPSEVRHQKGNYARALDKYKSKNRADENKMENWKAALRDVANISGKHFTPGRIIITTRDMQLLAKHGIKRKYEMEALNDKESLELLSGKAFRSMQVPASHKEVVKNLMHYAQGLPLALEVIGSNLQGKTVREWESALNQYERIPNKKIHQILKVSYDGLELFEKEIFLDIACFFNELFKGRSLNYVKEMEERVHNLDPHYSISVLEDKCLIKTEVDRIRMHDLIQDMGRQIVHQESPNRPEKRTRLWLNQDIVQVLEENTGTNKVRMIASENLSKCREVIWDGKAFEKMKNLKILCFKNLKFSEGPKYLPNSLKVLKWEEYPSSSLPPNFRARELFVMNVPHSRLKSVEFKMALNLSVLNLKECQNITQISDLSGISNLKKLNLHGCKNLIAVDDSVGELERLEVLNVEKCAKLKTFPHCIKSPCLKSLDLSQCSSLKYFPEILPKVPLRTLDVWGSGIEKLPACIKECMSLEEFWLSECKHLQEVEGIPPNLEWLVAQNCVSLSLESRSLLLSKEVIGAGIRKHGACCSKNFVMLGSIIPEWMDVCKKGGSISFWFRNVIPTFCCCALLTPSADYECDFDFGMRINGILVNVRINGRVFHNISLIKEDSIFLCIPDRDKDYERRQVLKGGVWNNAEISIRQHSSDLGGVKESGIYMIRQHCNMEDIRFTGPLNLDSLNIDQECMEHLAEYLETVFDLSKSSCRDWVECMREESIPEWFHKRTKGQDVSFCFRNNFPTLYGGALQNSDYNRLHPLSISINGCHFCKAYYSSLKLGNTVVYGLQLASFDEKEMKRAFREGEWNYVKIRVYDAKESGIYVTGQQYNKEDIRFTDPDMDAMANQESWCRLESWCGLDDDDDDEDEDEDEDVEGEQPMLKKRWLMEDNHVISISSYIYILNLNIFNHFIYPLPSVLIN 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1987 1027 Coils Coil 129 149 - -
Prci6g1987 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 283 IPR027417 -
Prci6g1987 1027 Gene3D - 189 273 IPR042197 -
Prci6g1987 1027 SMART till_3 16 156 IPR000157 GO:0007165
Prci6g1987 1027 Gene3D Ribonuclease Inhibitor 288 630 IPR032675 -
Prci6g1987 1027 SUPERFAMILY L domain-like 383 618 - -
Prci6g1987 1027 PRINTS Disease resistance protein signature 224 238 - -
Prci6g1987 1027 PRINTS Disease resistance protein signature 534 550 - -
Prci6g1987 1027 Gene3D - 13 182 IPR035897 -
Prci6g1987 1027 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 167 - -
Prci6g1987 1027 ProSiteProfiles TIR domain profile. 15 174 IPR000157 GO:0007165
Prci6g1987 1027 SUPERFAMILY "Winged helix" DNA-binding domain 259 370 IPR036390 -
Prci6g1987 1027 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
Prci6g1987 1027 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 165 616 IPR044974 GO:0006952
Prci6g1987 1027 Pfam NB-ARC domain 164 269 IPR002182 GO:0043531
Prci6g1987 1027 Pfam TIR domain 16 159 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1987 Prci-Chr6 19494495 19518030 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1987 151 617 WRKY Transcription Factor Family AT4G12020 32.258 9.56e-50 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1987 - - pcin:129313709 2082.76