Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1985 ATGACAACACAATCATCAACAACATCTTCCATCCATGATCATTGGACTTATGATGTCTTTATCAATTTTAGAGGAGAAGATACTCGTCATGGCTTCACAGGATATCTGTATAATGCTCTAACTAAAGTGGGAGTTCACACCTTCATTGATGATGAGGAAATAAGAAAGGGCGATGAAATTACTCCAACACTTTGCAAAGCAATTGAAGAATCTAGGATGGCCATTTGTGTGTTTTCTAAAAACTATGCGACATCAACATTTTGTCTTGATGAACTTGTCCACATCCATCAATGTTTTAAGAGAGATGGACGGCGAATTTGGCCAATCTTTTATGAAGTGGAGCCATCAGAAGTGCGACATCAAAAAGGGAATTATGCTCAAGCTTTGGATGACCATAAAATTAAAAACAAAGCTGATGAAAACAAGATGCAAATTTGGAAGCTTACACTACATGAAGTAGCTAATATCAGTGGCAAACATCTCATACCTAGGATCAAGAATGTTTACACAAGAAGGTTCTTTACCATGGCAGAAACTTCTTCGGTTATGAACTTGGCAATGTGGGTTCTTGGCATGGAAGATGGTTTCACCATGGATGTTCCACTTGCTTTGATACTTCACTACCACCACCAGATCGTTGAACTCCTCGTCTACATCGTTAATCCCTCAAACCTTTTGGAGCTTCTTCCTCGATCCATCTTGGTCGCTCTATCCTGGCATGGTTCATATGAATATCAATCAATTTATGAGATTGTGAAAGAAATCTATGGCATAATCAATAGTAGTCTCCCGTTACATGTCAACGATTATCTTGTTGGAATAGATGATAGATTGCAACGAATAAACTCTCAATTACAACTTGGATCAAATGAAGAGGTCATTATGTTTGGAATTTATGGAATGGGGGGCATGGGTAAAACAACTATAGCACGTGTCATGTATAACTCATTGGCAGATAATTTTGAAAGTTTGTGCTTTCTTGGTGATATTAAAGCAAACTCAATTAGCTTAGAAAGAATGCAAGAGAAAATGCTTTCACAGATTTTAGGGGTGGACATGAAAATTGAAGATGAAAAAAAAGGAGTTGCAATAATAAAAGAGAGGCTCAAACGAAAGAAAATCCTTTTGATTCTTGATAACGTTGATAAGTATGAGCAATTGCAAAAATTAGCTGGTAATTGTGATTGGTTTGGTGCTGGCAGTAGGATCATTATTACGACGAGGGACAAGCATTTACTTGTAAAGCATGAAGTTGAGAGAAAATATGTGATGGAGGCATTGAATGATAAAGAATCTCTTAAATTATTAAGTTGGAAAGCCTTTAGAAGTATGCAAGTTCCTGCAAGTCACAAGGAAGTTGTGGAAAAGGTGATGCATTATGTGCAAGGTCTTCCCTTAGCACTAGAAGTTATAGGCTCTAACTTGAAAGGTAAGACAATAAGGGAGTGGGAATCTGCATTAAATTTGTATAAAAGAATTCTTGATAAAGACATTTATCAAATATTGAAAGTAAGCTATGATGGCTTGAAACCAGTTGAACAAGAAATTTTTCTTGATATTGCTTGCTTCTTCAATAAAACCTTCAAAGGAAGATCACTGAACTATGTCGAAGAAATAGAGGAACGAGTTTGCAATCTTGATCCAAACTACAGTATTAGTGTGTTGGTAGACAAATGTCTTGTAAAGATTGTGGGTGATTGTATTAGGATGCACGATTTAATACAAGATATGGGAAGACAAATTGTTCATCAAGAATCACCAAATGATCCTGGAAAACGTACTAGATTATGGATCGATCAAGATATAACTCAAGTTTTGGAAGAAGATATAACGGCCTTGAATCTAAGTGTTTTGAATCTCAAAAAGTGCCAAAATATTACACAAATAACCAATTTACCTGCCCTCCCACATTTAAAAGAATTAAATCTTGCTGGATGCAAGAATTTAATTGCCATTGATGATTCAGTTGGAGAATTAGAAAGACTTGAAATCTTAGATGTGCATAAATGTGCCAAACTTAAAACCTTTCCCCGTTATATCAAGTCATCGTATCTTAAACGGCTGTGTCTTTCATATTGCTCAAGCCTGAAGTACTTTCCAAAAATACTAAAGAAAGTGCAACTAACACAATTGGAGTTAAGGGAAACTGGGATAGAAAAACTGCCTTCATCAATTTGCAATCTTATTCATCTTTTGAATATAGAAATTAGTGGGAAAATCGAGCCACCAAGTTTGGACTTTTTGTTTCCAAAACAATGTGAGAATTTTGATGAAGGTCATGGAAAGTTGCTGGAGGAAGTGATTCCATTTCGACGATTAAGGTTTTTGGAGGTACTTTCTTTAAATGGGTGCAAGTATTTGCAAGAAGTAGAAGGAATTCCACCAAACATAAGAGTGTTGGATGCAACAGATTGCATATCGTTGAGTTCAGAGTCGAGAAACTTTTTGTTGAGTGAAGAACTAATTGGGACTTCACTGATCAAACATGGGCTTTATAGAACCATCCAATTCATGGTGCCAAGATCAAGCATCCCAGAATGGTTGGATCTCTGTAAGAAAGGAGGATCTATTTCTTTTTGGTTTCGTAACTCCTTTCCATCTCTTTGTTTTTGTGCTCTTCTCAAACCAAGTTCTGATGATGCAAGTTTGGATCCCGAGGTGCACATTAATGGAAAACCTACAAAAATTGTTCCATTGATCAGTTTTTCCAAAAGTATAAAGGATCATATATTACTCTATCAACTTCAAGGACATGGATTTAAAGAAGGTGTGTGGAATTATGCACAGATTTTAATTGAGAACAACTGTCAAGATTGGAATGATGTAAAAGAGAGTGGAATTTATATGGTCAAACGATATTGCAATATGGAAGATATCCGATTCACTTGCCCCTTAAATTTGAATTCTATGAATATTGACCAAGGTACGTCTGCTATTTATAAATAG 2946 0.3595 MTTQSSTTSSIHDHWTYDVFINFRGEDTRHGFTGYLYNALTKVGVHTFIDDEEIRKGDEITPTLCKAIEESRMAICVFSKNYATSTFCLDELVHIHQCFKRDGRRIWPIFYEVEPSEVRHQKGNYAQALDDHKIKNKADENKMQIWKLTLHEVANISGKHLIPRIKNVYTRRFFTMAETSSVMNLAMWVLGMEDGFTMDVPLALILHYHHQIVELLVYIVNPSNLLELLPRSILVALSWHGSYEYQSIYEIVKEIYGIINSSLPLHVNDYLVGIDDRLQRINSQLQLGSNEEVIMFGIYGMGGMGKTTIARVMYNSLADNFESLCFLGDIKANSISLERMQEKMLSQILGVDMKIEDEKKGVAIIKERLKRKKILLILDNVDKYEQLQKLAGNCDWFGAGSRIIITTRDKHLLVKHEVERKYVMEALNDKESLKLLSWKAFRSMQVPASHKEVVEKVMHYVQGLPLALEVIGSNLKGKTIREWESALNLYKRILDKDIYQILKVSYDGLKPVEQEIFLDIACFFNKTFKGRSLNYVEEIEERVCNLDPNYSISVLVDKCLVKIVGDCIRMHDLIQDMGRQIVHQESPNDPGKRTRLWIDQDITQVLEEDITALNLSVLNLKKCQNITQITNLPALPHLKELNLAGCKNLIAIDDSVGELERLEILDVHKCAKLKTFPRYIKSSYLKRLCLSYCSSLKYFPKILKKVQLTQLELRETGIEKLPSSICNLIHLLNIEISGKIEPPSLDFLFPKQCENFDEGHGKLLEEVIPFRRLRFLEVLSLNGCKYLQEVEGIPPNIRVLDATDCISLSSESRNFLLSEELIGTSLIKHGLYRTIQFMVPRSSIPEWLDLCKKGGSISFWFRNSFPSLCFCALLKPSSDDASLDPEVHINGKPTKIVPLISFSKSIKDHILLYQLQGHGFKEGVWNYAQILIENNCQDWNDVKESGIYMVKRYCNMEDIRFTCPLNLNSMNIDQGTSAIYK 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1985 981 ProSiteProfiles TIR domain profile. 15 177 IPR000157 GO:0007165
Prci6g1985 981 Gene3D - 13 181 IPR035897 -
Prci6g1985 981 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 809 IPR044974 GO:0006952
Prci6g1985 981 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
Prci6g1985 981 Gene3D Ribonuclease Inhibitor 591 828 IPR032675 -
Prci6g1985 981 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 168 - -
Prci6g1985 981 Pfam NB-ARC domain 276 506 IPR002182 GO:0043531
Prci6g1985 981 Pfam TIR domain 17 154 IPR000157 GO:0007165
Prci6g1985 981 SUPERFAMILY L domain-like 598 812 - -
Prci6g1985 981 SMART till_3 16 156 IPR000157 GO:0007165
Prci6g1985 981 Gene3D - 255 423 IPR027417 -
Prci6g1985 981 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 254 520 IPR027417 -
Prci6g1985 981 Gene3D - 426 510 IPR042197 -
Prci6g1985 981 PRINTS Disease resistance protein signature 295 310 - -
Prci6g1985 981 PRINTS Disease resistance protein signature 368 382 - -
Prci6g1985 981 PRINTS Disease resistance protein signature 633 649 - -
Prci6g1985 981 PRINTS Disease resistance protein signature 461 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1985 Prci-Chr6 19449753 19455862 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1985 297 801 WRKY Transcription Factor Family AT5G45050 29.885 1.05e-47 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1985 - - pcin:129313972 1956.03