Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1977 ATGGCATCAATCATTGTTAAGCTTTTCTTTTCTCTCACTTTATGTTCTTCAATTTTCTCAATATCGTCGTCGTCGTCGTCATCTTCTTCTTCATCTATAGACTTTTGGTGCAACCAAACTCCTCATCCCGAGCCATGCAAATACCACATGAGCCAAAGTCATCACCACCAGTTCGAACCGCAACACCGGTCCGAGTTCACGAAAATTCTGGTTCAATTAGCACTGAACCAAGCCAAAGCCGTGCATGAGAAAGCACAAGCACATGGCCAAAAATGTGCGACCGAGATGCAGAAATGTGCATTCACTGATTGTTTAAAGCTCTACGACAACACTATCTTCCATCTAAACCGAACCCTTCATGGCCTACACACAGCTTCGTGCTCTCCATCAGATGCTCAAACATGGCTCAGCACTGCCCTCACAAACACAGAAACCTGCTGGAGCGCCATGTCGGCGGCGCAACTGGCAGAGTTCACAGCTCAAAATAACGTGAGTGACAATGTTAGGAAGATGATAAGCAATGTGCTGGCTGTTAATGGGAGATTTCTGAAGCAAGAGAATTATACAGAAGAAGAGATAAACGATGCACATGGTTTTCCGAGTTGGTTCTCGCGGCATGACAGGAGGTTGTTGAGCTTGAAGCCATCTTCGGTGAAGGCAAATCTTGTGGTGGCTAAAGATGGTTCGGGTCATTTTAAGACGGTGCAAGCCGCCATTGATGCAGCGTCAAGAAGAAGGGTGAAGACGAAGTTTGTGATACGAGTGAAGAGAGGGATTTACGAAGAGAATATTGAAGTTGATAAGGATAATGAAAATCTCATGATTGTTGGAGATGGAATGAGAGCAACCATTATAACTGGTAGCAGAAGCGTTAAAGATGGAATTACCCCGGCTGCCTCGGCAACAGCAGGCATAGATGGAGCTCGCTTCATTGCACGAGACGTCACTTTCAGAAACACAGCCGGTCCAGAAAACGGCCAAGCCGTGGCACTCCGATCAGCCTCAGACCTCTCGGTCTTCTACCGGTGCTCCATCGAAGGCTATCAAGACACTCTAATGGCTCATGCACAACGTCAATTCTACAGAGATTGTCGAATTTTCGGCACTGTGGATTTCATTTGGGGTAATGCCGCAGTTGTTCTACAAAACTGCAGAATTCTCGTAAGAAGGCCACTTCAAGGCCAAGCAAACATGATCACAGCTCAAGGACGAGGCGATCCGTTTCAGAACACCGGAATATCGATCATCGGTTGTCAGATTCGAGCCGCGCCGGATCTCAGGCCGGTTGTGCGATCATTTCAAACCTATTTGGGTAGGCCATGGCAGCAATATGCTAGAGTGGTGGTGATGAAGAGTTACATTGAAGGAGTGGTGAATCCATTAGGTTGGTCTCCATGGGGAGATAATGATTTGGGTCAAGACACGTGTTATTTTGGGGAATATATGAATTTTGGAGCTGGTTCATCAACACAAAGTAGGGTTCAATGGCCTGGGTTTCATGTTATAAGTAATCCAAATGAGGCAAACCAGTTCAGTGTTGCTAGTTTTCTTGCTGGGCGGACATGGCTGCCTGTCACTGGGGTGCCTTTTTCTATTGGTGTTTAA 1605 0.4642 MASIIVKLFFSLTLCSSIFSISSSSSSSSSSSIDFWCNQTPHPEPCKYHMSQSHHHQFEPQHRSEFTKILVQLALNQAKAVHEKAQAHGQKCATEMQKCAFTDCLKLYDNTIFHLNRTLHGLHTASCSPSDAQTWLSTALTNTETCWSAMSAAQLAEFTAQNNVSDNVRKMISNVLAVNGRFLKQENYTEEEINDAHGFPSWFSRHDRRLLSLKPSSVKANLVVAKDGSGHFKTVQAAIDAASRRRVKTKFVIRVKRGIYEENIEVDKDNENLMIVGDGMRATIITGSRSVKDGITPAASATAGIDGARFIARDVTFRNTAGPENGQAVALRSASDLSVFYRCSIEGYQDTLMAHAQRQFYRDCRIFGTVDFIWGNAAVVLQNCRILVRRPLQGQANMITAQGRGDPFQNTGISIIGCQIRAAPDLRPVVRSFQTYLGRPWQQYARVVVMKSYIEGVVNPLGWSPWGDNDLGQDTCYFGEYMNFGAGSSTQSRVQWPGFHVISNPNEANQFSVASFLAGRTWLPVTGVPFSIGV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1977 534 CDD PMEI-like_3 36 184 - -
Prci6g1977 534 Gene3D - 215 534 IPR012334 -
Prci6g1977 534 PANTHER PECTINESTERASE 15 524 - -
Prci6g1977 534 NCBIfam pectinesterase inhibitor domain 9 179 IPR006501 GO:0004857
Prci6g1977 534 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 182 IPR035513 -
Prci6g1977 534 FunFam Pectinesterase 215 534 - -
Prci6g1977 534 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 182 IPR035513 -
Prci6g1977 534 SMART PMEI_2 28 178 IPR006501 GO:0004857
Prci6g1977 534 Pfam Pectinesterase 221 519 IPR000070 GO:0030599|GO:0042545
Prci6g1977 534 Pfam Plant invertase/pectin methylesterase inhibitor 32 177 IPR006501 GO:0004857
Prci6g1977 534 SUPERFAMILY Pectin lyase-like 218 533 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1977 Prci-Chr6 19347199 19349736 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1977 23 531 Carbohydrate Esterase AT5G51500 55.534 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1977 K01051 - gmx:100816908 662.529