Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1932 ATGGCCGCTGGATTGGTGGTTCAGGCTGCAAGCCTCTTCAGGTACGCTGCTGAGACGGCATGTGTGATGGCCACGCGCGCCAAATTCACTGCCTGTAAGGTTTGCTGGGCAGGAGGCTGTTTCAGTTCTGATATATTGGCGGCCATCGAGAGGGCCATCTCAGACAACGTCAATGTCCTTTCCTTATCGCTTGGAGGTGGGATGACGGATTATTATAGAGATAGTGTGGCGATCGAATCTTTCGCTGCAATGGAGAAAGGGATTTTATTTGTTTCAATTTCTCTGAAGCTGATAATTTCAAATCCCAGAAAGCCCAGTAAGAAGATAGAGACATTTCCCTATAATAACCCATATGGGCATTACCTACAAGCAACCTTGAGTTCAAGCTTCAAGTTGCTCCTTCTTCCTCCTCCTCCGTCGGAATCCATCCCAAACTCTTCTGAGATTTTGAATATTTTTCTATGGTTTCGTAGAAGGAGAATGGTTGGTGGGATTGGGAATGTCTTGTGTCCGATAAGGCAGAAGAAAAAAAGTAAATTACGGCATGCACCATCTTCAGTTGTTGCTGTAGCTATCAATGGTAGCAAGAAAAGCAAAAGTATATTACAGTGGGCACTTAAGATTGTGCCTGAAGGGAGGATCATATTTAAGCTGATACATGTCCATGCCAGTATAAAAGGAGTTCCAACACCAATGGGAAATTTCATCCCTATTTCACAAGTGCGTCCTGATGTAGCAAATGCCTTCAAAAAGGAAGTGGAGTGGCAGAAAAGTCAAATGCTTCTACCCTATAAAACAATGTGTGATCAGAGAAAGGTGCATGTAGATATGGTGATGATCGAATCTGATGATGTTGCAGCTGCAATAGAAGAAGAAATTGCCAAGGGTGCTGTGACCAAACTTGTTATTGGGGCATCATCTCGTAGCTTATTTTCTAGCAAGCTTAAGGGTATTGCTGCAAAAATATCAGTTTGTACTCCAATTTGTACAGTTTATGCTATTTCCAATGGAGAATTGTCTTCTGTACGGCCGTCAGATGTACAGATTGATGAGAGCTTAGTAGATGACAGTAGTGGAACCAATGATTCCTCCAGTTCATCAAACTACACTTCCACCTCTCCGACAGCATATGCTGTAGCTTATACACCTATGTTATATTATGTGGTTGTGGTAGTCATAGGAATTCATGTTGAGTGTTCATGTATGTGCTATGCTAGCATCCTTGGTTTTGATTGCTTGCTTACATTTTCTTTGGAAATCTTAGTTGTGAATTGCATGATGAAGCATCGCCTTCTGTTTTACCTTGCGACTCTGCTACAGTTGCTTTCATATGGTCCTTTAAATTCCACTTTAACGGAGCAGCAATTTCAAGCTCTTTCCTCTCTTAATCAGACCGTCCTAAGTGCAAATCCTAGTTTTATTGAATCTAACCATTCTAGATGCCAGTCCCTAGATATTGGAACAGAGGATAATATTACAAGTTTGTCTGCTAGAAATTCTAGTATTGGTTATGGTCTCTGTCGGGCGTCTACTTGCAAAAGCTTTAAATCAGAAACAGAATCTTGGCTTCATGTTGAAAATTCTACCATCGACGTGCCACAAGAAACTGAATCTCCTTCACCTGCTTGGCAGGAAAATATTAGTCTTGAGCTGGAAAAGTTAAGGATTGAACTAAGACATGCCCAAGGAATGCATGCAATAGCTCAAAGTGAGAACATTGATGCATCACGGAAGCTGAATGATTTAAATAAGAGACGATCAGGGGAATTAATGAGATTCAACGAGATTATTGCCAAAGAAGAGATGGTAAAAGAATCGTTAAGGAAAGAGAGAGAGAAGTATGAAGCTGCAAAAAGAGAAGCTGATTATTTGAAAGAATGCACTGAAAGAGAAGCTGCAGAACGAAGAGAAATGGAAATGAAAGCTGTCCGTGCTGCACGAGAGAAAGAGAAACTGGAGTCTGCTCTTACTGGTTCGGCGCCTCAGTACCTTAAGTTTACATGGGACGAGATAGTGTCTGCCACCTCATCCTTCTCTGAAGATCTGATAATCGGTATGGGAGCATATGGTAGAGTGTACAAGTGTAATTTGCATCATACTGTTGTAGCTGTTAAAGTACTCCACTCTAAAGGGAGCCACAACAGCAAGCAATTCCAACAGGAGCTAGAGATCTTGTCCAGAATTCGTCATCCTAATCTGCTGCTCCTTCTTGGTGCATGTCCTGATAATGGATGCCTTGTATATGAATATATGGAGAATGGTAGCTTGGAGGACCGGTTATTCCGGAAAAATGGCTCTGCCCCGATTCCTTGGTATGAGCGGTATCGGATTGCATGGGAAGTAGCCGCAGCCCTTGCCTTTCTTCACAGCTCGAAGCCAACACCCATCATCCACCGTGATTTAAAACCAGCAAACATTTTGCTTGACAGTAACTTAGTGAGCAAGATTGGTGATATTGGTCTTTCTACAGTTCTCAATTCAGATGTCTCCTCTACCATGTACAAGGAGACAGAGCCTGTTGGGACCCTCTGCTACATCGATCCTGAGTATCAAAGGACCGGGTTGATATCTCCAAAATCCGATGTGTATGCTTTTGGAATGGTGATCTTACAATTATTGACAGCAAAACCAGCTATAGCACTCACTCATGCGGTAGAAACAGCAGTTGATGATGGTAAGCTCGCAGACATATTGGACCCTGAGGCAGGGAATTGGCCACTTCAGGAGACAATGGACTTAGCCCGATTGGGCCTTAGCTGTACTGAACTCCGTCGCAGAGACCGACCAAATTTAGATCATGTGATTCCTGCACTAGAACGATTGAAAGAAGTTGCTGACAGAGCCCAAAGTTCCAGTCTTGGTGTTAAATCAAAACCTCCTGCTCATTTTATTTGCCCAATACTTCAGGATGTGATGGATGATCCTTGTGTTGCTGCGGATGGATATACATATGATCGCAAAGCGATCGAAACATGGCTTCAAGAGAACGACAAATCACCAATGACTAATGTGGAAATTCCTCATAAGAATCTAATCCCTAATTACACACTTCTATCAGCAATCATGGAGTGGAAGTCTGGAGGAAAATGA 3090 0.4259 MAAGLVVQAASLFRYAAETACVMATRAKFTACKVCWAGGCFSSDILAAIERAISDNVNVLSLSLGGGMTDYYRDSVAIESFAAMEKGILFVSISLKLIISNPRKPSKKIETFPYNNPYGHYLQATLSSSFKLLLLPPPPSESIPNSSEILNIFLWFRRRRMVGGIGNVLCPIRQKKKSKLRHAPSSVVAVAINGSKKSKSILQWALKRXVPEGRIIFKLIHVHASIKGVPTPMGNFIPISQVRPDVANAFKKEVEWQKSQMLLPYKTMCDQRKVHVDMVMIESDDVAAAIEEEIAKGAVTKLVIGASSRSLFSSKLKGIAAKISVCTPRXCTVYAISNGELSSVRPSDVQIDESLVDDSSGTNDSSSSSNYTSTSPTAYAVAYTPMLYYVVVVVIGIHVECSCMCYASILGFDCLLTFSLEILVVNCMMKHRLLFYLATLLQLLSYGPLNSTLTEQQFQALSSLNQTVLSANPSFIESNHSRCQSLDIGTEDNITSLSARNSSIGYGLCRASTCKSFKSETESWLHVENSTIDVPQETESPSPAWQENISLELEKLRIELRHAQGMHAIAQSENIDASRKLNDLNKRRSGELMRFNEIIAKEEMVKESLRKEREKYEAAKREADYLKECTEREAAERREMEMKAVRAAREKEKLESALTGSAPQYLKFTWDEIVSATSSFSEDLIIGMGAYGRVYKCNLHHTVVAVKVLHSKGSHNSKQFQQELEILSRIRHPNLLLLLGACPDNGCLVYEYMENGSLEDRLFRKNGSAPIPWYERYRIAWEVAAALAFLHSSKPTPIIHRDLKPANILLDSNLVSKIGDIGLSTVLNSDVSSTMYKETEPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAIALTHAVETAVDDGKLADILDPEAGNWPLQETMDLARLGLSCTELRRRDRPNLDHVIPALERLKEVADRAQSSSLGVKSKPPAHFICPILQDVMDDPCVAADGYTYDRKAIETWLQENDKSPMTNVEIPHKNLIPNYTLLSAIMEWKSGGK 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1932 1031 ProSitePatterns Protein kinases ATP-binding region signature. 686 707 IPR017441 GO:0005524
Prci6g1932 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Prci6g1932 1031 PANTHER OS02G0152300 PROTEIN 187 1025 - -
Prci6g1932 1031 SMART serkin_6 680 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1932 1031 Coils Coil 553 587 - -
Prci6g1932 1031 SUPERFAMILY RING/U-box 956 1027 - -
Prci6g1932 1031 Gene3D Phosphorylase Kinase; domain 1 658 752 - -
Prci6g1932 1031 Gene3D HUPs 186 324 IPR014729 -
Prci6g1932 1031 SUPERFAMILY Protein kinase-like (PK-like) 662 940 IPR011009 -
Prci6g1932 1031 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 188 317 - -
Prci6g1932 1031 Pfam Protein kinase domain 683 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1932 1031 ProSiteProfiles U-box domain profile. 960 1031 IPR003613 GO:0004842|GO:0016567
Prci6g1932 1031 Gene3D Peptidase S8/S53 domain 2 91 IPR036852 GO:0004252|GO:0006508
Prci6g1932 1031 CDD RING-Ubox_WDSUB1-like 962 1016 - -
Prci6g1932 1031 Pfam Subtilase family 23 91 IPR000209 GO:0006508|GO:0008236
Prci6g1932 1031 CDD STK_N 187 339 - -
Prci6g1932 1031 Gene3D Transferase(Phosphotransferase) domain 1 753 959 - -
Prci6g1932 1031 Coils Coil 637 657 - -
Prci6g1932 1031 SUPERFAMILY Subtilisin-like 18 91 IPR036852 GO:0004252|GO:0006508
Prci6g1932 1031 ProSiteProfiles Protein kinase domain profile. 680 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1932 1031 Pfam U-box domain 962 1027 IPR003613 GO:0004842|GO:0016567
Prci6g1932 1031 Coils Coil 599 629 - -
Prci6g1932 1031 SMART Ubox_2 964 1026 IPR003613 GO:0004842|GO:0016567
Prci6g1932 1031 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 960 1030 IPR013083 -
Prci6g1932 1031 CDD STKc_IRAK 686 943 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1932 Prci-Chr6 18193764 18224096 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1932 185 360 U-box Gene Family AT4G25160 48.864 2.03e-46 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci6g1932 Pkinase 4.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1932 - - pcin:129313959 1918.28