Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1894 ATGGAAGTGGATAATTCTTCGAATTTTGAACCCGCTGTTAATTCACCGTCAGTCAGAAGCGCCATGTCCTTTCAGTCTAGGGGCTCCAGTAGGAATTTGACCCGAGAAGTGAATTTGGGGCTTCCGGATGCCAAGCATGAGCGGTATGGTTCGAAGGGAGCAGATTCTGAAGTACTCAGTACGTCCAAGAAGGAAATCAGCGATGTGGATGCGAGGTTAGTTTATATAAATGATCCTGTGAGTACGAATGAGAGTCGGTTTTCAGGAAATTCGATTCGTACTGCGAAATACTCTATCATCACCTTTTTGCCCAAGAATTTGTTTGAACAATTCCGTAGAGTTGCTTACTTTTATTTTCTTATAATTGCCATACTTAATCAGCTCCCTCAGATTGCCGTTTTTGGGATTGGGGTTTCTTTTTTGCCGTTAACCTTTGTCCTGGTAGTTTCGGCTTTGAAGGATGCATATGAGGACTGGAGGCGGCATCAGTCTGACAAGATTGAGAATAACAGGTCAGCATTGGTTTTGGTTGATGATAATTTCCAAAGGAAAATATATAAGGACATTAGAGTTGGTGAAGTGATTAAAATCCATGCAAATAAAACCATTCCCTGTGATATGGTGCTGCTGTCAACCAGTGATCCTACAGGAGTTGCATATGTTCAGACTGCTAATTTAGATGGAGAGTCAAATTTGAAGACTCGGTATGCAAAACCTGAGACCATATCACTGTTGCCTGAAAAGGAGAGGATTAATGGGTTAATTAAGTGTGAGAAACCCAATAGGAACATTTATGGGTTTCAGGGTAGCATGGAAATTGATGGAAAGCGATTGTCACTTGGATCATCTAATATTGTTCTCCGAGGCTGTGAAATCAAGAATACCGATTGGGCAATTGGTGTTGCTGTATATTGTGGCCAAGAAACTAAAGCAATGCTCAATAGCGCAGGGGCTCCATCAAAGAGGAGTCGGCTGGAGACTCGTATGAACAAGGAGATCATCCTGATCTCTTGCTTTCTTGTAACTTTGTGTGCAGTTATCTCTGTTTGTACTGCTTTTTGGTTAAAGCGCTACAAATATGAATTGGATCTCTTGCCCTATTATCGGAAACTAGATGTTTCAAGTGGAAAAGCAAAAAGCTATAAATATTCTGGATGGGGGTTGGAGATACTGATCGCATTCCTCATGTCAGTTATAGTGTTCCAAGTCATGATTCCCATATCATTGTACATTTCCATGGAGCTTGTCCGGATTGGTCAGGCCTACTTCATGACCAGAGACACCAAAATGTATGATGAGGCATCAAATTCCAGATTTCAGTGTCGAGCTTTAAATATAAATGAAGACTTGGGACAAATTAAATATATTTTTTCAGACAAAACTGGCACACTTACTGAGAACAAGATGGAATTTCAATGTGCAAGCATCTGGGGGGTTGATTACAGCTCTCAAAATGCCGATCTGGAGAATGAGCCTGTCCAAGTTGATGGAAAGATATTGAAGCCTAAAATGAAGGTGAAAGTTGATCCAAAGCTTTTGCATTTAACAAGAGGTGGATTCAAAAACAAGGAGGGAAAACATATTTGTGAATTCTTCCTTGTGTTGGCAGCCTGCAATACTATTGTGCCTCTTCTTCTCGACACATCTGATCCTGCAGTCAAGTTGATTGATTACCAAGGGGAATCACCAGATGAACAAGCACTGGCATATGGTGCTGCCGCCTATGGTTTTACACTCATAGAACGAACTTCAGGGTATATAGTTATTGATATTCAAGGAGAAAGACAAAGGTTTAATGTCTTGGGTTTGCATGAATTTGATAGTGACCGGAAGAGGATGTCTGTTATATTGGGGTTCCCTGACAACTCTGTGAAAGTTTTTGTCAAAGGCGCTGATATGTCAATGTTTAGTGTGATAGATAAATCATCGAGCACAGATATAATACGTGCAACTGAAACCCATCTTCACTCTTATTCCTCCCTTGGTTTGAGAACCCTTGTCATTGGGATGCGGGAATTGAATCCTTCAGAATTTGAGGAATGGCATTTTGCCTTTGAGGAAGCTAGCAATGCTCTGGGTGGTAGGGCTGCTTTGCTTCGCAGGGTTTCCAGCAGTGTGGAAAACAATCTCTGCATATTAGGTGCATCTGCTATTGAAGATAAGCTGCAGCAAGGGGTGCCTGAATCCATTGAATCTCTGAGGACAGCAGGTATCAAGATATGGGTGTTGACTGGTGACAAACAGGAAACTGCCATATCAATTGCTTACTCCTCAAAGCTCCTAACAGGTGATATGACTCGAATTGTAATTAATAGCAATGATAGAGAGTCATGTAGCAGGCATTTACATGATGCCCAACGCATGACCATCTCCGGGGTTGCTAACAACATTGGAAGAAGTATTGAACCTGTAACAAATCAAATAGCATTAATCATTGATGGTACCAGCCTTGTATACATTCTTGAAAGTGAAAACACTGAACTCGAAGAACAGCTTTTTCAACTTGCGGGTAAATGTTCTGTGGTTCTTTGCTGTCGAGTAGCTCCACTACAAAAGGCTGGGATTGTGTCCCTTGTGAAGAAGAGGACCTCTGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTGGGTATCAGTGGACAGGAGGGTCGGCAAGCTGTAATGGCATCAGATTTTGCAATGGGACAATTTAGGTTTCTTGTTCCTCTCTTACTGGTTCATGGCCATTGGAATTATCAACGGCTGGGTTACATGGTGCTATACAATTTGTACAGGAATGCTATCATTGTTCTTGTCCTATTTTGGTATGTGCTTTTCACTGCCTTCACTTTGACAACTGCTATAACTGAATGGAGCAGTTTGTTATATTCTGTAGTTTACACTTCATTCCCGACTATAATTGTTGGTATTCTTGACAAAGATCTTAGTAAAAAGACTCTCCTGAAGTACCCTCAGCTTTATGGAGCTGGGCAGAGAAATGAGGCCTATAATGAACATTTATTTTGGTTGACAATGGCTGATACTTTGTGGCAAAGTATCGCTGTGTTCTTTGTTCCTCTCTTTGCCTATTGGGGAAGCACCGTCGATGTATCAAGCATTGGAGATCTTTGGACTCTTTCAGTGGTTATTTTGGTTAATTTACACTTGGCTATGGATGTCATCAGGTGGACTTGGATTACTCATGCAGCCATTTGGGGTTCTGTTATTGCAACCTTCATTTCTGTCATGATCATTGATGCTCTACCCACATTTCCTGGTTACTGGGCCATCTTTCATGTCGCGGGAACACGTTTGTTCTGGTTATGTTTGCTTGGATCCATTGTGGGCGCTTTGCTTCCTCGGTTTGTTGTAAAAATTGTGCATCAGCATTTTTGCCCAAACGATGTTCAAATTTCAAGAGAAGTCGAAAAGAAGTTTGTGAATACAACAAGAGTTGGTGGTGGTGGGCAGATAGAAATGCATGCTATTGCAGATGATCCAACTAGATAA 3522 0.4148 MEVDNSSNFEPAVNSPSVRSAMSFQSRGSSRNLTREVNLGLPDAKHERYGSKGADSEVLSTSKKEISDVDARLVYINDPVSTNERXRFSGNSIRTAKYSIITFLPKNLFEQFRRVAYFYFLIIAILNQLPQIAVFGIGVSFLPLTFVLVVSALKDAYEDWRRHQSDKIENNRSALVLVDDNFQRKIYKDIRVGEVIKIHANKTIPCDMVLLSTSDPTGVAYVQTANLDGESNLKTRYAKPETISLLPEKERINGLIKCEKPNRNIYGFQGSMEIDGKRLSLGSSNIVLRGCEIKNTDWAIGVAVYCGQETKAMLNSAGAPSKRSRLETRMNKEIILISCFLVTLCAVISVCTAFWLKRYKYELDLLPYYRKLDVSSGKAKSYKYSGWGLEILIAFLMSVIVFQVMIPISLYISMELVRIGQAYFMTRDTKMYDEASNSRFQCRALNINEDLGQIKYIFSDKTGTLTENKMEFQCASIWGVDYSSQNADLENEPVQVDGKILKPKMKVKVDPKLLHLTRGGFKNKEGKHICEFFLVLAACNTIVPLLLDTSDPAVKLIDYQGESPDEQALAYGAAAYGFTLIERTSGYIVIDIQGERQRFNVLGLHEFDSDRKRMSVILGFPDNSVKVFVKGADMSMFSVIDKSSSTDIIRATETHLHSYSSLGLRTLVIGMRELNPSEFEEWHFAFEEASNALGGRAALLRRVSSSVENNLCILGASAIEDKLQQGVPESIESLRTAGIKIWVLTGDKQETAISIAYSSKLLTGDMTRIVINSNDRESCSRHLHDAQRMTISGVANNIGRSIEPVTNQIALIIDGTSLVYILESENTELEEQLFQLAGKCSVVLCCRVAPLQKAGIVSLVKKRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRLGYMVLYNLYRNAIIVLVLFWYVLFTAFTLTTAITEWSSLLYSVVYTSFPTIIVGILDKDLSKKTLLKYPQLYGAGQRNEAYNEHLFWLTMADTLWQSIAVFFVPLFAYWGSTVDVSSIGDLWTLSVVILVNLHLAMDVIRWTWITHAAIWGSVIATFISVMIIDALPTFPGYWAIFHVAGTRLFWLCLLGSIVGALLPRFVVKIVHQHFCPNDVQISREVEKKFVNTTRVGGGGQIEMHAIADDPTR 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1894 1174 FunFam Phospholipid-transporting ATPase 558 691 - -
Prci6g1894 1174 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 464 726 IPR023299 GO:0000166
Prci6g1894 1174 SUPERFAMILY Calcium ATPase, transmembrane domain M 85 1138 IPR023298 -
Prci6g1894 1174 SUPERFAMILY Calcium ATPase, transduction domain A 171 312 IPR008250 -
Prci6g1894 1174 NCBIfam phospholipid-translocating P-type ATPase 88 1146 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Prci6g1894 1174 Gene3D - 560 687 IPR023299 GO:0000166
Prci6g1894 1174 NCBIfam HAD-IC family P-type ATPase 139 242 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci6g1894 1174 NCBIfam HAD-IC family P-type ATPase 842 958 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci6g1894 1174 Pfam Cation transport ATPase (P-type) 563 636 - -
Prci6g1894 1174 SFLD p-type atpase 442 922 IPR044492 -
Prci6g1894 1174 Pfam Phospholipid-translocating ATPase N-terminal 74 136 IPR032631 -
Prci6g1894 1174 Gene3D - 710 911 IPR023214 -
Prci6g1894 1174 FunFam Phospholipid-transporting ATPase 713 911 - -
Prci6g1894 1174 FunFam Phospholipid-transporting ATPase 146 315 - -
Prci6g1894 1174 Pfam Phospholipid-translocating P-type ATPase C-terminal 899 1139 IPR032630 -
Prci6g1894 1174 ProSitePatterns E1-E2 ATPases phosphorylation site. 460 466 IPR018303 -
Prci6g1894 1174 FunFam Phospholipid-transporting ATPase IC 455 467 - -
Prci6g1894 1174 SFLD Haloacid Dehalogenase 442 922 - -
Prci6g1894 1174 Gene3D - 144 315 - -
Prci6g1894 1174 SUPERFAMILY HAD-like 445 912 IPR036412 -
Prci6g1894 1174 PRINTS P-type cation-transporting ATPase superfamily signature 871 890 - -
Prci6g1894 1174 PRINTS P-type cation-transporting ATPase superfamily signature 458 472 - -
Prci6g1894 1174 PRINTS P-type cation-transporting ATPase superfamily signature 755 765 - -
Prci6g1894 1174 CDD P-type_ATPase_APLT_Dnf-like 90 1031 - -
Prci6g1894 1174 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 65 1149 - -
Prci6g1894 1174 PRINTS Sodium/potassium-transporting ATPase signature 451 472 - -
Prci6g1894 1174 PRINTS Sodium/potassium-transporting ATPase signature 948 968 - -
Prci6g1894 1174 Pfam E1-E2 ATPase 172 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1894 Prci-Chr6 17249048 17254758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1894 35 1174 Primary Pumps ATPases AT5G04930 68.269 0.0 1628