Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1884 ATGGGGGAAGAAGCTGTTCCTGATCTCAGTAATAATGTTACATCAGTACTTGAATCGATGAATTTGGATTTCAAGCACTTAGCTGATGGTGTTGCTGTTGCTCTTCTTGTTATTGCCCTTTCGTCTGCATATTTCTACTGCTACAACTTGTTTCTTAAACCCAAGGCTTGTTTGGATCGTAAGAACTTCAGAGAATTCAAGCTTGTGAAGAAGACAAATCTGAGTCACAATTCTGCAAGATTTAGATTTGCTCTTCCTACACCTACTTCAGTTCTTGGCCTTCCTATTGGAAAACATATTAAATGCAGGGGAAGAGATAGCCAAGGAGAGGAAGTCACCAGACCATATACCCCAATCACTTTGGATTCAGATGTTGGCTACTTTGAATTGGTGGTAAAGATGTATCCAAAAGGAAGGATGTCTCACCATTTTAGAGAGATGAAAGAAGGTGATTGCTTGGCCGTCAAGGGTCCTAAGGGACGTTTCAGTTACAAACCAAATCAAGCTCGCGCGTATGGAATGCTCGCTGGAGGTTCTGGCATCACCCCAATGTTTCAGATCACACGAGCCATACTAGAAAATCCAAAAGACAAAACGAAACTGAACCTTATTTATGCCAATGTTACAGTGGATGACATTCTACTAAAGGAAGAAATTGATGAGTTGGCAAGCAAGTATCCTGACCGTTTCAAAGTTTACTATGTTCTAAATCAGCCTCCTCAACCATGGAATGGTGGGGTTGGGTTCATATCAAAGGAAATGATTCAAACCCATTGTCCTGCACCTGCATCTGATATCCAGATACTAATGTGTGGTCCACCAGCAATGAATAGAGCCATGGCTGCTCACCTTGATGCACTTGGCTACGCACCAAATATGCAGTTTCAGTTCTGA 894 0.4195 MGEEAVPDLSNNVTSVLESMNLDFKHLADGVAVALLVIALSSAYFYCYNLFLKPKACLDRKNFREFKLVKKTNLSHNSARFRFALPTPTSVLGLPIGKHIKCRGRDSQGEEVTRPYTPITLDSDVGYFELVVKMYPKGRMSHHFREMKEGDCLAVKGPKGRFSYKPNQARAYGMLAGGSGITPMFQITRAILENPKDKTKLNLIYANVTVDDILLKEEIDELASKYPDRFKVYYVLNQPPQPWNGGVGFISKEMIQTHCPAPASDIQILMCGPPAMNRAMAAHLDALGYAPNMQFQF 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1884 297 Gene3D Translation factors 55 154 - -
Prci6g1884 297 FunFam NADH-cytochrome b5 reductase 155 297 - -
Prci6g1884 297 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 173 192 IPR001709 GO:0016491
Prci6g1884 297 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 211 222 IPR001709 GO:0016491
Prci6g1884 297 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 267 275 IPR001709 GO:0016491
Prci6g1884 297 Pfam Oxidoreductase NAD-binding domain 174 280 IPR001433 GO:0016491
Prci6g1884 297 Pfam Oxidoreductase FAD-binding domain 66 164 IPR008333 -
Prci6g1884 297 FunFam NADH-cytochrome b5 reductase 56 155 - -
Prci6g1884 297 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 153 292 IPR039261 -
Prci6g1884 297 CDD cyt_b5_reduct_like 66 297 - -
Prci6g1884 297 PANTHER NADH-CYTOCHROME B5 REDUCTASE 53 297 IPR001834 GO:0016491
Prci6g1884 297 Gene3D - 155 296 IPR039261 -
Prci6g1884 297 PRINTS Cytochrome B5 reductase signature 173 192 - -
Prci6g1884 297 PRINTS Cytochrome B5 reductase signature 150 164 - -
Prci6g1884 297 PRINTS Cytochrome B5 reductase signature 267 275 - -
Prci6g1884 297 PRINTS Cytochrome B5 reductase signature 92 103 - -
Prci6g1884 297 PRINTS Cytochrome B5 reductase signature 114 121 - -
Prci6g1884 297 PRINTS Cytochrome B5 reductase signature 211 222 - -
Prci6g1884 297 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 61 165 IPR017927 GO:0016491
Prci6g1884 297 SUPERFAMILY Riboflavin synthase domain-like 53 167 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1884 Prci-Chr6 17076601 17085568 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1884 53 297 NADPH P450 reductases AT5G17770 75.510 4.28e-145 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1884 K00326 - sind:105155731 429.483