Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1858 ATGCTTGAAGAGTTATATCTTTCTTACAATGACTTGCAAGGAAGTATTCCAAAAGAGATTGGTGAACTTCATAATTTGAAAACAATATCCTTGGGTGTTAATGAGTTTTTTGGTCAAATACCATCAACTATCTTCAACATTTCAGGGTTGCAACAGATGGATTTGAGTCAGAATAATTTGTCAGGGAGCATCCCCTCATATATATGTCATGGGATTCCAAAAATCCAATATCTGTCTCTTGAATTCAATGAATTGTCTGGTGCCTTACCATCTCAATGGATACAATGCAAGGATCTCAACATGTTTTCAGTAGCCTCCAATAGATTTAGTGGACACATTCCAAGGGAGATTGTAAACCTCACTATGCTTCAAGAATTATATTTGCCTGGAAACGTTTTCACAGGTACAATTCCTGTGGAAATAGGCAATCTTCATAAGCTTGAGAAATTAGAGTTGGCAATGAATGAATTGAGTGGATCTATTCCCTCAATAATTTTTAACATGTCAACTTTGAAACTCTTGTCTCTACAAAGCAATTTTCTGTCAGGTAGTCTTCCATCAAATTTTGGAAGTGGCCTTCCATATTTGGAACAACTGTATTTATGGGGAAACAGACTTTCTGGAAGAATCCCAAAGACTATATCCAATGCTTCTAAGCTAACAATGATGGAATTGGCATACAACAACTTTGAAGGGGCTTTACCTAGCACGATTGGGCATTTAATATACTTGAAAACCCTTCAATTATCTGCTAATGATTTAACCATTGTAGAAACTTCCAGTTCTGAAAACAACTTCCTTACCTCATTGACAAATTGTAGAAATTTGGAAGTCTTGGATCTCTCAATAAATCCATTGTATACAAAACTTTCCAAAGCCATTGGAAACTTCTCTCATTCCCTACAGAAGATGGATATGCACTCTTGCAAAATTAATGGCAACATACCCTCAGAGATTGGGAATCTTACTAATTTGATTAGACTATCTTTGGGTGAAAATAGTCTGACTGGACCACTTCCAAGGACTATCAGCAATTTAAAAGCTCTTCAGTTTTTGAATTTTGAAGGCAATCAGCTACAAGGCTTAATCGTTGATGAGATTTGTGAGATTAAGAGACTTGTTTATCTTTATCTAAGTTTAAACAAGTTTTCTGGAGCAATGCCAACTTGCATAGGAAATATGACTTCTTTGCAAAAGCTTTTTGTGGGCTCCAATAAATTGATTTCAGTTATACCTTCTTCCTTTTGGAACTTAAATGATATATTGGAAGTAAATTTATCTTCCAATATTTTAGTTGGAAATCTTTCATTCAAAATTGGAAACTTAAAAGCTCTTACGTTATTGGATTTGTCAAGAAATAATCTTTCAAGCATCATTCCTATAACATTGGGTGGCTTGCAGAATCTACAAATTCTCTCCTTAGCACATAACACATTGCAAGGGAATATTCCTGAAACATTTGGAAATTTGCTAAGCTTGGTAAAGTTGGACCTCTCCCAAAATAATTTGTCTGGTGAAATCCCTAAATCTCTAGAGTCACTTGTTTATCTTAAGAACATCAATCTCTCTTATAATAAATTGCATGGAGAGATTCCAAATGGTGGGGCTTTTAAAAATTTAACTTTTGAGTCTTTCATGATGAATGACGCTCTTTGTGGCCAACCACGGTTGAGAGTGCCTCCATGTAGAAATGGAATAAGAAAAGGATCAATGACTAAATTGATCTTATTAAAAATTATATTACCCATTGTTGTGTCAACAATTTTAGTTGTTTTAGGTATCATACTATGGTGGAAACGACCAAATTCAAAAAATGATCAAGTTGAAAGGAATTGTTCAACTTTAGGAGTACCAAGAAGGATTTCTTATTTTGAGATTGTAGATGCAACTAATGGATTTGATGAGAGTAACTTGATTGGCCGCGGTAGCTATGGTTCTGTGTTCAAAGGAAAGCTTTTCAATGGGATTGTAGTTGCAATTAAAATCTTCAATTTTGATTCAGAAATAATGTCAAGGAGCTTTGAAGTAGAATGTGATACAATGCGTAATGTGCGCCATCGCAATTTGGTGAAGATCATTAGTAGTTGCTCTAATATTGATTTCAAGTGTTTGATAATGGAGTTCATGCCCAAAGGGAGCCTTGAAAAATGGTTATATTCTCATAACTATTGTTTAGACTTTCTTGAAAGATTGAATATAATGATAAACGTAGCATCTGCCTTAGAGTATCTTCATCATGGCTTGTCAACACCAATAGTTCATTGTGATTTAAAGCCAAGTAACATCTTGTTGGATGATAATATGGTTGGTCATGTGAGTGACTTTGGAATTTCCAAACTTTTAGATGAAGGGCAATCAAAGACACATACAGAAACAATTCCTACAATTGGCTATGTCGCACCTGAATATGGATCTTCTGGAGTTGTTTCAACTAAAGTAGATGTATATAGCTATGGAATTATATTGAAAGAAGTCTTCACAAGGAAAAAACCAACCGACAATATGTTTGTTTCAGGATTGAGCTTAAAGGGTTGGGTAAGTGTGTCAATGCCACATGCAATAATTCAAGTCATAGACTCCAATTTATTACAAGAAGATGAACAACATGTTGATCATATCTTACAAGCCACATCCTCTATTTTTGAATTAGCCTTGAGTTGTTGTACTGATATTCCAGAAACACGTAGCAATATGATAGATGTTGTAGTGTCATTAAACAAGATCAAGGCCAAATTTATGCAAGGTCAGAAATGTCATATTTGA 2763 0.3467 MLEELYLSYNDLQGSIPKEIGELHNLKTISLGVNEFFGQIPSTIFNISGLQQMDLSQNNLSGSIPSYICHGIPKIQYLSLEFNELSGALPSQWIQCKDLNMFSVASNRFSGHIPREIVNLTMLQELYLPGNVFTGTIPVEIGNLHKLEKLELAMNELSGSIPSIIFNMSTLKLLSLQSNFLSGSLPSNFGSGLPYLEQLYLWGNRLSGRIPKTISNASKLTMMELAYNNFEGALPSTIGHLIYLKTLQLSANDLTIVETSSSENNFLTSLTNCRNLEVLDLSINPLYTKLSKAIGNFSHSLQKMDMHSCKINGNIPSEIGNLTNLIRLSLGENSLTGPLPRTISNLKALQFLNFEGNQLQGLIVDEICEIKRLVYLYLSLNKFSGAMPTCIGNMTSLQKLFVGSNKLISVIPSSFWNLNDILEVNLSSNILVGNLSFKIGNLKALTLLDLSRNNLSSIIPITLGGLQNLQILSLAHNTLQGNIPETFGNLLSLVKLDLSQNNLSGEIPKSLESLVYLKNINLSYNKLHGEIPNGGAFKNLTFESFMMNDALCGQPRLRVPPCRNGIRKGSMTKLILLKIILPIVVSTILVVLGIILWWKRPNSKNDQVERNCSTLGVPRRISYFEIVDATNGFDESNLIGRGSYGSVFKGKLFNGIVVAIKIFNFDSEIMSRSFEVECDTMRNVRHRNLVKIISSCSNIDFKCLIMEFMPKGSLEKWLYSHNYCLDFLERLNIMINVASALEYLHHGLSTPIVHCDLKPSNILLDDNMVGHVSDFGISKLLDEGQSKTHTETIPTIGYVAPEYGSSGVVSTKVDVYSYGIILKEVFTRKKPTDNMFVSGLSLKGWVSVSMPHAIIQVIDSNLLQEDEQHVDHILQATSSIFELALSCCTDIPETRSNMIDVVVSLNKIKAKFMQGQKCHI 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1858 920 SUPERFAMILY RNI-like 2 269 - -
Prci6g1858 920 Pfam Leucine rich repeat 468 527 IPR001611 GO:0005515
Prci6g1858 920 Pfam Leucine rich repeat 372 429 IPR001611 GO:0005515
Prci6g1858 920 ProSiteProfiles Protein kinase domain profile. 633 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1858 920 SMART LRR_sd22_2 394 420 - -
Prci6g1858 920 SMART LRR_sd22_2 322 348 - -
Prci6g1858 920 SMART LRR_sd22_2 23 49 - -
Prci6g1858 920 SMART LRR_sd22_2 273 299 - -
Prci6g1858 920 SMART LRR_sd22_2 193 219 - -
Prci6g1858 920 SMART LRR_sd22_2 490 516 - -
Prci6g1858 920 SMART LRR_sd22_2 466 485 - -
Prci6g1858 920 SMART LRR_sd22_2 442 463 - -
Prci6g1858 920 SMART LRR_sd22_2 144 170 - -
Prci6g1858 920 Gene3D Transferase(Phosphotransferase) domain 1 709 918 - -
Prci6g1858 920 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 194 907 - -
Prci6g1858 920 FunFam Leucine-rich repeat receptor-like protein kinase TDR 1 265 - -
Prci6g1858 920 PRINTS Leucine-rich repeat signature 490 503 - -
Prci6g1858 920 PRINTS Leucine-rich repeat signature 445 458 - -
Prci6g1858 920 SUPERFAMILY L domain-like 299 555 - -
Prci6g1858 920 Gene3D Phosphorylase Kinase; domain 1 616 708 - -
Prci6g1858 920 Pfam Protein kinase domain 634 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1858 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 752 764 IPR008271 GO:0004672|GO:0006468
Prci6g1858 920 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 269 565 - -
Prci6g1858 920 ProSitePatterns Protein kinases ATP-binding region signature. 639 661 IPR017441 GO:0005524
Prci6g1858 920 SUPERFAMILY Protein kinase-like (PK-like) 612 905 IPR011009 -
Prci6g1858 920 SMART LRR_typ_2 490 514 IPR003591 -
Prci6g1858 920 SMART LRR_typ_2 322 346 IPR003591 -
Prci6g1858 920 SMART LRR_typ_2 442 465 IPR003591 -
Prci6g1858 920 SMART LRR_typ_2 394 417 IPR003591 -
Prci6g1858 920 SMART LRR_typ_2 144 168 IPR003591 -
Prci6g1858 920 SMART LRR_typ_2 193 217 IPR003591 -
Prci6g1858 920 SMART LRR_typ_2 466 489 IPR003591 -
Prci6g1858 920 SMART LRR_typ_2 241 264 IPR003591 -
Prci6g1858 920 SMART LRR_typ_2 47 71 IPR003591 -
Prci6g1858 920 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 709 917 - -
Prci6g1858 920 SMART serkin_6 633 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1858 920 FunFam Serine-threonine protein kinase plant-type 614 708 - -
Prci6g1858 920 Gene3D Ribonuclease Inhibitor 261 568 IPR032675 -
Prci6g1858 920 Gene3D Ribonuclease Inhibitor 1 260 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1858 Prci-Chr6 16559571 16568234 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1858 4 917 Receptor kinase-like Gene Family AT3G47570 37.288 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g1858 Pkinase 3.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1858 - K13420 qsa:O6P43_031966 988.023