Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1856 ATGACAAATCTTTGTTTTCATTTTTGTGTCTCCATGTCCTTATTACTACTTTGTCTCATGGTTTGTCCCATTATATGTAACACCACTTTTACCACTGATGACTCTGCAGTTCTTGCCCTCAAATTTTCAGTGACCGATCCTCACAATCACTTGGCTAATTGGTCCAACTCTTCTTCAATTTGCGATTGGACTGGTGTTATATGTGATTCCAATGATGGGAGAGTCAAGATCTTGAAACTTGGCGGGATGGGTCTCAAGGGCGCCTTACCCTCGCAAATTGGTAATTTGTCTTTTCTGGAGGAACTTGACCTTCACAGCAATAGTTTTTACGGGATGATACCTCCAAGTGTTTTTAACTTATCCTCACTTGAGCAGATCATTTTGTCCAACAATTCCTTATCAGGAGTTATTCCTAAAGGAATCAGTAATCTGACAAATGTAAAGTACATATCTTTAAGTGGAAATCTGCTGTCTGGACAATTACCAAAAGGCATTGAAAACTTGACTATGCTTGAAGAGTTATATCTTTCTTACAATGACTTGCAAGGAAGTATTCCAAAAGAGATTGGTGAACTTCATAATTTGAAAACAATATCCTTGGGTGTTAATGAGTTTTTTGGTCAAATACCATCAACTATCTTCAACATTTCAGGGTTGCAACAGATGGATTTGAGTCAGAATAATTTGTCAGGGAGCATCCCCTCATATATATGTCATGGGATTCCAAAAATCCAATATCTGTCTCTTGAATTCAATGAATTGTCTGGTGCCTTACCATCTCAATGGATACAATGCAAGGATCTCAACATGTTTTCAGTAGCCTCCAATAGATTTAGTGGACACATTCCAAGGGAGATTGTAAACCTCACTATGCTTCAAGAATTATATTTGCCTGGAAACGTTTTCACAGGTACAATTCCTGTGGAAATAGGCAATCTTCATAAGCTTGAGAAATTAGAGTTGGCAATGAATGAATTGAGTGGATCTATTCCCTCAATAATTTTTAACATGTCAACTTTGAAACTCTTGTCTCTACAAAGCAATTTTCTGTCAGGTAGTCTTCCATCAAATTTTGGAAGTGGCCTTCCATATTTGGAACAACTGTATTTATGGGGAAACAGACTTTCTGGAAGAATCCCAAAGACTATATCCAATGCTTCTAAGCTAACAATGATGGAATTGGCATACAACAACTTTGAAGGGGCTTTACCTAGCACGATTGGGCATTTAATATACTTGAAAACCCTTCAATTATCTGCTAATGATTTAACCATTGTAGAAACTTCCAGTTCTGAAAACAACTTCCTTACCTCATTGACAAATTGTAGAAATTTGGAAGTCTTGGATCTCTCAATAAATCCATTGTATACAAAACTTTCCAAAGCCATTGGAAACTTCTCTCATTCCCTACAGAAGATGGATATGCACTCTTGCAAAATTAATGGCAACATACCCTCAGAGATTGGGAATCTTACTAATTTGATTAGACTATCTTTGGGTGAAAATAGTCTGACTGGACCACTTCCAAGGACTATCAGCAATTTAAAAGCTCTTCAGTTTTTGAATTTTGAAGGCAATCAGCTACAAGGCTTAATCGTTGATGAGATTTGTGAGATTAAGAGACTTGTTTATCTTTATCTAAGTTTAAACAAGTTTTCTGGAGCAATGCCAACTTGCATAGGAAATATGACTTCTTTGCAAAAGCTTTTTGTGGGCTCCAATAAATTGATTTCAGTTATACCTTCTTCCTTTTGGAACTTAAATGATATATTGGAAGTAAATTTATCTTCCAATATTTTAGTTGGAAATCTTTCATTCAAAATTGGAAACTTAAAAGCTCTTACGTTATTGGATTTGTCAAGAAATAATCTTTCAAGCATCATTCCTATAACATTGGGTGGCTTGCAGAATCTACAAATTCTCTCCTTAGCACATAACACATTGCAAGGGAATATTCCTGAAACATTTGGAAATTTGCTAAGCTTGGTAAAGTTGGACCTCTCCCAAAATAATTTGTCTGGTGAAATCCCTAAATCTCTAGAGTCACTTGTTTATCTTAAGAACATCAATCTCTCTTATAATAAATTGCATGGAGAGATTCCAAATGGTGGGGCTTTTAAAAATTTAACTTTTGAGTCTTTCATGATGAATGACGCTCTTTGTGGCCAACCACGGTTGAGAGTGCCTCCATGTAGAAATGGAATAAGAAAAGGATCAATGACTAAATTGATCTTATTAAAAATTATATTACCCATTGTTGTGTCAACAATTTTAGTTGTTTTAGGTATCATACTATGGTGGAAACGACCAAATTCAAAAAATGATCAAGTTGAAAGGAATTGTTCAACTTTAGGAGTACCAAGAAGGATTTCTTATTTTGAGATTGTAGATGCAACTAATGGATTTGATGAGAGTAACTTGATTGGCCGCGGTAGCTATGGTTCTGTGTTCAAAGGAAAGCTTTTCAATGGGATTGTAGTTGCAATTAAAATCTTCAATTTTGATTCAGAAATAATGTCAAGGAGCTTTGAAGTAGAATGTGATACAATGCGTAATGTGCGCCATCGCAATTTGGTGAAGATCATTAGTAGTTGCTCTAATATTGATTTCAAGTGTTTGATAATGGAGTTCATGCCCAAAGGGAGCCTTGAAAAATGGTTATATTCTCATAACTATTGTTTAGACTTTCTTGAAAGATTGAATATAATGATAAACGTAGCATCTGCCTTAGAGTATCTTCATCATGGCTTGTCAACACCAATAGTTCATTGTGATTTAAAGCCAAGTAACATCTTGTTGGATGATAATATGGTTGGTCATGTGAGTGACTTTGGAATTTCCAAACTTTTAGATGAAGGGCAATCAAAGACACATACAGAAACAATTCCTACAATTGGCTATGTCGCACCTGAATATGGATCTTCTGGAGTTGTTTCAACTAAAGTAGATGTATATAGCTATGGAATTATATTGAAAGAAGTCTTCACAAGGAAAAAACCAACCGACAATATGTTTGTTTCAGGATTGAGCTTAAAGGGTTGGGTAAGTGTGTCAATGCCACATGCAATAATTCAAGTCATAGACTCCAATTTATTACAAGAAGATGAACAACATGTTGATCATATCTTACAAGCCACATCCTCTATTTTTGAATTAGCCTTGAGTTGTTGTACTGATATTCCAGAAACACGTAGCAATATGATAGATGTTGTAGTGTCATTAAACAAGATCAAGGCCAAATTTATGCAAGGTCAGAAATGTCATATTTGA 3270 0.3535 MTNLCFHFCVSMSLLLLCLMVCPIICNTTFTTDDSAVLALKFSVTDPHNHLANWSNSSSICDWTGVICDSNDGRVKILKLGGMGLKGALPSQIGNLSFLEELDLHSNSFYGMIPPSVFNLSSLEQIILSNNSLSGVIPKGISNLTNVKYISLSGNLLSGQLPKGIENLTMLEELYLSYNDLQGSIPKEIGELHNLKTISLGVNEFFGQIPSTIFNISGLQQMDLSQNNLSGSIPSYICHGIPKIQYLSLEFNELSGALPSQWIQCKDLNMFSVASNRFSGHIPREIVNLTMLQELYLPGNVFTGTIPVEIGNLHKLEKLELAMNELSGSIPSIIFNMSTLKLLSLQSNFLSGSLPSNFGSGLPYLEQLYLWGNRLSGRIPKTISNASKLTMMELAYNNFEGALPSTIGHLIYLKTLQLSANDLTIVETSSSENNFLTSLTNCRNLEVLDLSINPLYTKLSKAIGNFSHSLQKMDMHSCKINGNIPSEIGNLTNLIRLSLGENSLTGPLPRTISNLKALQFLNFEGNQLQGLIVDEICEIKRLVYLYLSLNKFSGAMPTCIGNMTSLQKLFVGSNKLISVIPSSFWNLNDILEVNLSSNILVGNLSFKIGNLKALTLLDLSRNNLSSIIPITLGGLQNLQILSLAHNTLQGNIPETFGNLLSLVKLDLSQNNLSGEIPKSLESLVYLKNINLSYNKLHGEIPNGGAFKNLTFESFMMNDALCGQPRLRVPPCRNGIRKGSMTKLILLKIILPIVVSTILVVLGIILWWKRPNSKNDQVERNCSTLGVPRRISYFEIVDATNGFDESNLIGRGSYGSVFKGKLFNGIVVAIKIFNFDSEIMSRSFEVECDTMRNVRHRNLVKIISSCSNIDFKCLIMEFMPKGSLEKWLYSHNYCLDFLERLNIMINVASALEYLHHGLSTPIVHCDLKPSNILLDDNMVGHVSDFGISKLLDEGQSKTHTETIPTIGYVAPEYGSSGVVSTKVDVYSYGIILKEVFTRKKPTDNMFVSGLSLKGWVSVSMPHAIIQVIDSNLLQEDEQHVDHILQATSSIFELALSCCTDIPETRSNMIDVVVSLNKIKAKFMQGQKCHI 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1856 1089 Gene3D Transferase(Phosphotransferase) domain 1 878 1087 - -
Prci6g1856 1089 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 878 1086 - -
Prci6g1856 1089 SMART serkin_6 802 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1856 1089 Gene3D Ribonuclease Inhibitor 432 737 IPR032675 -
Prci6g1856 1089 Gene3D Phosphorylase Kinase; domain 1 785 877 - -
Prci6g1856 1089 SUPERFAMILY L domain-like 31 297 - -
Prci6g1856 1089 Gene3D Ribonuclease Inhibitor 184 287 IPR032675 -
Prci6g1856 1089 Gene3D Ribonuclease Inhibitor 360 431 IPR032675 -
Prci6g1856 1089 Gene3D Ribonuclease Inhibitor 32 183 IPR032675 -
Prci6g1856 1089 SMART LRR_sd22_2 563 589 - -
Prci6g1856 1089 SMART LRR_sd22_2 491 517 - -
Prci6g1856 1089 SMART LRR_sd22_2 192 218 - -
Prci6g1856 1089 SMART LRR_sd22_2 144 170 - -
Prci6g1856 1089 SMART LRR_sd22_2 659 685 - -
Prci6g1856 1089 SMART LRR_sd22_2 362 388 - -
Prci6g1856 1089 SMART LRR_sd22_2 442 468 - -
Prci6g1856 1089 SMART LRR_sd22_2 635 654 - -
Prci6g1856 1089 SMART LRR_sd22_2 313 339 - -
Prci6g1856 1089 SMART LRR_sd22_2 611 632 - -
Prci6g1856 1089 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Prci6g1856 1089 SUPERFAMILY RNI-like 243 485 - -
Prci6g1856 1089 SUPERFAMILY L domain-like 468 724 - -
Prci6g1856 1089 Pfam Leucine rich repeat 99 157 IPR001611 GO:0005515
Prci6g1856 1089 Pfam Leucine rich repeat 637 696 IPR001611 GO:0005515
Prci6g1856 1089 Pfam Leucine rich repeat 541 598 IPR001611 GO:0005515
Prci6g1856 1089 SMART LRR_typ_2 216 240 IPR003591 -
Prci6g1856 1089 SMART LRR_typ_2 96 120 IPR003591 -
Prci6g1856 1089 SMART LRR_typ_2 491 515 IPR003591 -
Prci6g1856 1089 SMART LRR_typ_2 168 192 IPR003591 -
Prci6g1856 1089 SMART LRR_typ_2 362 386 IPR003591 -
Prci6g1856 1089 SMART LRR_typ_2 611 634 IPR003591 -
Prci6g1856 1089 SMART LRR_typ_2 659 683 IPR003591 -
Prci6g1856 1089 SMART LRR_typ_2 313 337 IPR003591 -
Prci6g1856 1089 SMART LRR_typ_2 563 586 IPR003591 -
Prci6g1856 1089 SMART LRR_typ_2 635 658 IPR003591 -
Prci6g1856 1089 SMART LRR_typ_2 410 433 IPR003591 -
Prci6g1856 1089 SMART LRR_typ_2 144 167 IPR003591 -
Prci6g1856 1089 SUPERFAMILY Protein kinase-like (PK-like) 781 1074 IPR011009 -
Prci6g1856 1089 Gene3D Ribonuclease Inhibitor 288 359 IPR032675 -
Prci6g1856 1089 FunFam Leucine-rich repeat receptor-like protein kinase TDR 188 434 - -
Prci6g1856 1089 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 187 - -
Prci6g1856 1089 ProSitePatterns Serine/Threonine protein kinases active-site signature. 921 933 IPR008271 GO:0004672|GO:0006468
Prci6g1856 1089 ProSitePatterns Protein kinases ATP-binding region signature. 808 830 IPR017441 GO:0005524
Prci6g1856 1089 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 438 734 - -
Prci6g1856 1089 ProSiteProfiles Protein kinase domain profile. 802 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1856 1089 PANTHER OS04G0122200 PROTEIN 302 1082 - -
Prci6g1856 1089 FunFam Serine-threonine protein kinase plant-type 783 877 - -
Prci6g1856 1089 Pfam Protein kinase domain 803 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1856 Prci-Chr6 16558902 16568234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1856 535 702 Receptor kinase-like Gene Family AT3G47570 33.143 3.29e-15 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g1856 Pkinase 4.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1856 - K13420 qsa:O6P43_031966 1072.38