Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1855 ATGACAAATCTTTGTTTTCATTTTTGTGTCTCCATGTCCTTATTACTACTTTGTCTCATGGTTTGTCCCATTATATGTAACACCACTTTTACCACTGATGACTCTGCAGTTCTTGCCCTCAAATTTTCAGTGACCGATCCTCACAATCACTTGGCTAATTGGTCCAACTCTTCTTCAATTTGCGATTGGACTGGTGTTATATGTGATTCCAATGATGGGAGAGTCAAGATCTTGAAACTTGGCGGGATGGGTCTCAAGGGCGCCTTACCCTCGCAAATTGGTAATTTGTCTTTTCTGGAGGAACTTGACCTTCACAGCAATAGTTTTTACGGGATGATACCTCCAAGTGTTTTTAACTTATCCTCACTTGAGCAGATCATTTTGTCCAACAATTCCTTATCAGGATCCATTCCACTTGAGATTGCAAGACTTCAACGTTTGAAGATTTTAAGCATTTCATCAAACAACCTTTCAGGAATGATACCTCCAACTATTTCTAACCTATACTCACTTGAACAAATCGTTTTGTCCTTCAATTCCTTATCAGGAGTTATTCCTAAAGGAATCAGTAATCTGACAAATGTAAAGTACATATCTTTAAGTGGAAATCTGCTGTCTGGACAATTACCAAAAGGCATTGAAAACTTGACTATGCTTGAAGAGTTATATCTTTCTTACAATGACTTGCAAGGAAGTATTCCAAAAGAGATTGGTGAACTTCATAATTTGAAAACAATATCCTTGGGTGTTAATGAGTTTTTTGGTCAAATACCATCAACTATCTTCAACATTTCAGGGTTGCAACAGATGGATTTGAGTCAGAATAATTTGTCAGGGAGCATCCCCTCATATATATGTCATGGGATTCCAAAAATCCAATATCTGTCTCTTGAATTCAATGAATTGTCTGGTGCCTTACCATCTCAATGGATACAATGCAAGGATCTCAACATGTTTTCAGTAGCCTCCAATAGATTTAGTGGACACATTCCAAGGGAGATTGTAAACCTCACTATGCTTCAAGAATTATATTTGCCTGGAAACGTTTTCACAGGTACAATTCCTGTGGAAATAGGCAATCTTCATAAGCTTGAGAAATTAGAGTTGGCAATGAATGAATTGAGTGGATCTATTCCCTCAATAATTTTTAACATGTCAACTTTGAAACTCTTGTCTCTACAAAGCAATTTTCTGTCAGGTAGTCTTCCATCAAATTTTGGAAGTGGCCTTCCATATTTGGAACAACTGTATTTATGGGGAAACAGACTTTCTGGAAGAATCCCAAAGACTATATCCAATGCTTCTAAGCTAACAATGATGGAATTGGCATACAACAACTTTGAAGGGGCTTTACCTAGCACGATTGGGCATTTAATATACTTGAAAACCCTTCAATTATCTGCTAATGATTTAACCATTGTAGAAACTTCCAGTTCTGAAAACAACTTCCTTACCTCATTGACAAATTGTAGAAATTTGGAAGTCTTGGATCTCTCAATAAATCCATTGTATACAAAACTTTCCAAAGCCATTGGAAACTTCTCTCATTCCCTACAGAAGATGGATATGCACTCTTGCAAAATTAATGGCAACATACCCTCAGAGATTGGGAATCTTACTAATTTGATTAGACTATCTTTGGGTGAAAATAGTCTGACTGGACCACTTCCAAGGACTATCAGCAATTTAAAAGCTCTTCAGTTTTTGAATTTTGAAGGCAATCAGCTACAAGGCTTAATCGTTGATGAGATTTGTGAGATTAAGAGACTTGTTTATCTTTATCTAAGTTTAAACAAGTTTTCTGGAGCAATGCCAACTTGCATAGGAAATATGACTTCTTTGCAAAAGCTTTTTGTGGGCTCCAATAAATTGATTTCAGTTATACCTTCTTCCTTTTGGAACTTAAATGATATATTGGAAGTAAATTTATCTTCCAATATTTTAGTTGGAAATCTTTCATTCAAAATTGGAAACTTAAAAGCTCTTACGTTATTGGATTTGTCAAGAAATAATCTTTCAAGCATCATTCCTATAACATTGGGTGGCTTGCAGAATCTACAAATTCTCTCCTTAGCACATAACACATTGCAAGGGAATATTCCTGAAACATTTGGAAATTTGCTAAGCTTGGTAAAGTTGGACCTCTCCCAAAATAATTTGTCTGGTGAAATCCCTAAATCTCTAGAGTCACTTGTTTATCTTAAGAACATCAATCTCTCTTATAATAAATTGCATGGAGAGATTCCAAATGGTGGGGCTTTTAAAAATTTAACTTTTGAGTCTTTCATGATGAATGACGCTCTTTGTGGCCAACCACGGTTGAGAGTGCCTCCATGTAGAAATGGAATAAGAAAAGGATCAATGACTAAATTGATCTTATTAAAAATTATATTACCCATTGTTGTGTCAACAATTTTAGTTGTTTTAGGTATCATACTATGGTGGAAACGACCAAATTCAAAAAATGATCAAGTTGAAAGGAATTGTTCAACTTTAGGAGTACCAAGAAGGATTTCTTATTTTGAGATTGTAGATGCAACTAATGGATTTGATGAGAGTAACTTGATTGGCCGCGGTAGCTATGGTTCTGTGTTCAAAGGAAAGCTTTTCAATGGGATTGTAGTTGCAATTAAAATCTTCAATTTTGATTCAGAAATAATGTCAAGGAGCTTTGAAGTAGAATGTGATACAATGCGTAATGTGCGCCATCGCAATTTGGTGAAGATCATTAGTAGTTGCTCTAATATTGATTTCAAGTGTTTGATAATGGAGTTCATGCCCAAAGGGAGCCTTGAAAAATGGTTATATTCTCATAACTATTGTTTAGACTTTCTTGAAAGATTGAATATAATGATAAACGTAGCATCTGCCTTAGAGTATCTTCATCATGGCTTGTCAACACCAATAGTTCATTGTGATTTAAAGCCAAGTAACATCTTGTTGGATGATAATATGGTTGGTCATGTGAGTGACTTTGGAATTTCCAAACTTTTAGATGAAGGGCAATCAAAGACACATACAGAAACAATTCCTACAATTGGCTATGTCGCACCTGAATATGGATCTTCTGGAGTTGTTTCAACTAAAGTAGATGTATATAGCTATGGAATTATATTGAAAGAAGTCTTCACAAGGAAAAAACCAACCGACAATATGTTTGTTTCAGGATTGAGCTTAAAGGGTTGGGTAAGTGTGTCAATGCCACATGCAATAATTCAAGTCATAGACTCCAATTTATTACAAGAAGATGAACAACATGTTGATCATATCTTACAAGCCACATCCTCTATTTTTGAATTAGCCTTGAGTTGTTGTACTGATATTCCAGAAACACGTAGCAATATGATAGATGTTGTAGTGTCATTAAACAAGATCAAGGCCAAATTTATGCAAGGTCAGAAATGTCATATTTGA 3414 0.3535 MTNLCFHFCVSMSLLLLCLMVCPIICNTTFTTDDSAVLALKFSVTDPHNHLANWSNSSSICDWTGVICDSNDGRVKILKLGGMGLKGALPSQIGNLSFLEELDLHSNSFYGMIPPSVFNLSSLEQIILSNNSLSGSIPLEIARLQRLKILSISSNNLSGMIPPTISNLYSLEQIVLSFNSLSGVIPKGISNLTNVKYISLSGNLLSGQLPKGIENLTMLEELYLSYNDLQGSIPKEIGELHNLKTISLGVNEFFGQIPSTIFNISGLQQMDLSQNNLSGSIPSYICHGIPKIQYLSLEFNELSGALPSQWIQCKDLNMFSVASNRFSGHIPREIVNLTMLQELYLPGNVFTGTIPVEIGNLHKLEKLELAMNELSGSIPSIIFNMSTLKLLSLQSNFLSGSLPSNFGSGLPYLEQLYLWGNRLSGRIPKTISNASKLTMMELAYNNFEGALPSTIGHLIYLKTLQLSANDLTIVETSSSENNFLTSLTNCRNLEVLDLSINPLYTKLSKAIGNFSHSLQKMDMHSCKINGNIPSEIGNLTNLIRLSLGENSLTGPLPRTISNLKALQFLNFEGNQLQGLIVDEICEIKRLVYLYLSLNKFSGAMPTCIGNMTSLQKLFVGSNKLISVIPSSFWNLNDILEVNLSSNILVGNLSFKIGNLKALTLLDLSRNNLSSIIPITLGGLQNLQILSLAHNTLQGNIPETFGNLLSLVKLDLSQNNLSGEIPKSLESLVYLKNINLSYNKLHGEIPNGGAFKNLTFESFMMNDALCGQPRLRVPPCRNGIRKGSMTKLILLKIILPIVVSTILVVLGIILWWKRPNSKNDQVERNCSTLGVPRRISYFEIVDATNGFDESNLIGRGSYGSVFKGKLFNGIVVAIKIFNFDSEIMSRSFEVECDTMRNVRHRNLVKIISSCSNIDFKCLIMEFMPKGSLEKWLYSHNYCLDFLERLNIMINVASALEYLHHGLSTPIVHCDLKPSNILLDDNMVGHVSDFGISKLLDEGQSKTHTETIPTIGYVAPEYGSSGVVSTKVDVYSYGIILKEVFTRKKPTDNMFVSGLSLKGWVSVSMPHAIIQVIDSNLLQEDEQHVDHILQATSSIFELALSCCTDIPETRSNMIDVVVSLNKIKAKFMQGQKCHI 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1855 1137 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 926 1134 - -
Prci6g1855 1137 Gene3D Ribonuclease Inhibitor 407 476 IPR032675 -
Prci6g1855 1137 Pfam Leucine rich repeat 589 646 IPR001611 GO:0005515
Prci6g1855 1137 Pfam Leucine rich repeat 99 157 IPR001611 GO:0005515
Prci6g1855 1137 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Prci6g1855 1137 Pfam Leucine rich repeat 685 744 IPR001611 GO:0005515
Prci6g1855 1137 SMART serkin_6 850 1130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1855 1137 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Prci6g1855 1137 ProSitePatterns Protein kinases ATP-binding region signature. 856 878 IPR017441 GO:0005524
Prci6g1855 1137 Gene3D Transferase(Phosphotransferase) domain 1 926 1135 - -
Prci6g1855 1137 Gene3D Ribonuclease Inhibitor 477 785 IPR032675 -
Prci6g1855 1137 SMART LRR_sd22_2 707 733 - -
Prci6g1855 1137 SMART LRR_sd22_2 410 436 - -
Prci6g1855 1137 SMART LRR_sd22_2 490 516 - -
Prci6g1855 1137 SMART LRR_sd22_2 240 266 - -
Prci6g1855 1137 SMART LRR_sd22_2 144 170 - -
Prci6g1855 1137 SMART LRR_sd22_2 683 702 - -
Prci6g1855 1137 SMART LRR_sd22_2 659 680 - -
Prci6g1855 1137 SMART LRR_sd22_2 611 637 - -
Prci6g1855 1137 SMART LRR_sd22_2 361 387 - -
Prci6g1855 1137 SMART LRR_sd22_2 539 565 - -
Prci6g1855 1137 SMART LRR_sd22_2 192 218 - -
Prci6g1855 1137 PANTHER OS04G0122200 PROTEIN 350 1130 - -
Prci6g1855 1137 SUPERFAMILY L domain-like 290 526 - -
Prci6g1855 1137 SUPERFAMILY Protein kinase-like (PK-like) 829 1122 IPR011009 -
Prci6g1855 1137 SUPERFAMILY L domain-like 31 326 - -
Prci6g1855 1137 Pfam Protein kinase domain 851 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1855 1137 Gene3D Ribonuclease Inhibitor 30 184 IPR032675 -
Prci6g1855 1137 Gene3D Ribonuclease Inhibitor 185 285 IPR032675 -
Prci6g1855 1137 Gene3D Ribonuclease Inhibitor 286 406 IPR032675 -
Prci6g1855 1137 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 288 474 - -
Prci6g1855 1137 SUPERFAMILY L domain-like 516 772 - -
Prci6g1855 1137 FunFam Serine-threonine protein kinase plant-type 831 925 - -
Prci6g1855 1137 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 66 287 - -
Prci6g1855 1137 ProSiteProfiles Protein kinase domain profile. 850 1130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1855 1137 Gene3D Phosphorylase Kinase; domain 1 833 925 - -
Prci6g1855 1137 SMART LRR_typ_2 410 434 IPR003591 -
Prci6g1855 1137 SMART LRR_typ_2 611 634 IPR003591 -
Prci6g1855 1137 SMART LRR_typ_2 683 706 IPR003591 -
Prci6g1855 1137 SMART LRR_typ_2 361 385 IPR003591 -
Prci6g1855 1137 SMART LRR_typ_2 458 481 IPR003591 -
Prci6g1855 1137 SMART LRR_typ_2 192 215 IPR003591 -
Prci6g1855 1137 SMART LRR_typ_2 96 120 IPR003591 -
Prci6g1855 1137 SMART LRR_typ_2 707 731 IPR003591 -
Prci6g1855 1137 SMART LRR_typ_2 264 288 IPR003591 -
Prci6g1855 1137 SMART LRR_typ_2 144 168 IPR003591 -
Prci6g1855 1137 SMART LRR_typ_2 216 240 IPR003591 -
Prci6g1855 1137 SMART LRR_typ_2 659 682 IPR003591 -
Prci6g1855 1137 SMART LRR_typ_2 539 563 IPR003591 -
Prci6g1855 1137 ProSitePatterns Serine/Threonine protein kinases active-site signature. 969 981 IPR008271 GO:0004672|GO:0006468
Prci6g1855 1137 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 486 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1855 Prci-Chr6 16558902 16568234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1855 583 749 Receptor kinase-like Gene Family AT3G47570 33.333 3.41e-15 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g1855 Pkinase 4.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1855 - K13420 qsa:O6P43_031966 1127.08