Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1853 ATGACAAATCTTTGTTTTCATTTTTGTGTCTCCATGTCCTTATTACTACTTTGTCTCATGGTTTGTCCCATTATATGTAACACCACTTTTACCACTGATGACTCTGCAGTTCTTGCCCTCAAATTTTCAGTGACCGATCCTCACAATCACTTGGCTAATTGGTCCAACTCTTCTTCAATTTGCGATTGGACTGGTGTTATATGTGATTCCAATGATGGGAGAGTCAAGATCTTGAAACTTGGCGGGATGGGTCTCAAGGGCGCCTTACCCTCGCAAATTGGTAATTTGTCTTTTCTGGAGGAACTTGACCTTCACAGCAATAGTTTTTACGGTGAGTTGCCAAAAGAGTTACGGAAGTTAGACAAGTTAAGAATTCTCAACTTGAGCTACAATCAATTTAGTGGAGATATTCCATTATGGATAGGAAGCTTATTCACACTTCAACACTTGATTCTCGAAAAAAATAATCTTGGGGGTGTTATTCCTTTAAGCATATCCAATTTGTCAAAGCTGGAGACTTTAAATTGGAGATCTAATTTCATAGAAGGATCCATTCCACTTGAGATTGGAAGGCTTCAATACTTGAAGATTTTACGCATTTCATCAAACAACCTTTCAGGGATGATACCTCCAAGTGTTTTTAACTTATCCTCACTTGAGCAGATCATTTTGTCCAACAATTCCTTATCAGGATCCATTCCACTTGAGATTGCAAGACTTCAACGTTTGAAGATTTTAAGCATTTCATCAAACAACCTTTCAGGAATGATACCTCCAACTATTTCTAACCTATACTCACTTGAACAAATCGTTTTGTCCTTCAATTCCTTATCAGGAGTTATTCCTAAAGGAATCAGTAATCTGACAAATGTAAAGTACATATCTTTAAGTGGAAATCTGCTGTCTGGACAATTACCAAAAGGCATTGAAAACTTGACTATGCTTGAAGAGTTATATCTTTCTTACAATGACTTGCAAGGGTTGCAACAGATGGATTTGAGTCAGAATAATTTGTCAGGGAGCATCCCCTCATATATATGTCATGGGATTCCAAAAATCCAATATCTGTCTCTTGAATTCAATGAATTGTCTGGTGCCTTACCATCTCAATGGATACAATGCAAGGATCTCAACATGTTTTCAGTAGCCTCCAATAGATTTAGTGGACACATTCCAAGGGAGATTGTAAACCTCACTATGCTTCAAGAATTATATTTGCCTGGAAACGTTTTCACAGGTACAATTCCTGTGGAAATAGGCAATCTTCATAAGCTTGAGAAATTAGAGTTGGCAATGAATGAATTGAGTGGATCTATTCCCTCAATAATTTTTAACATGTCAACTTTGAAACTCTTGTCTCTACAAAGCAATTTTCTGTCAGGTAGTCTTCCATCAAATTTTGGAAGTGGCCTTCCATATTTGGAACAACTGTATTTATGGGGAAACAGACTTTCTGGAAGAATCCCAAAGACTATATCCAATGCTTCTAAGCTAACAATGATGGAATTGGCATACAACAACTTTGAAGGGGCTTTACCTAGCACGATTGGGCATTTAATATACTTGAAAACCCTTCAATTATCTGCTAATGATTTAACCATTGTAGAAACTTCCAGTTCTGAAAACAACTTCCTTACCTCATTGACAAATTGTAGAAATTTGGAAGTCTTGGATCTCTCAATAAATCCATTGTATACAAAACTTTCCAAAGCCATTGGAAACTTCTCTCATTCCCTACAGAAGATGGATATGCACTCTTGCAAAATTAATGGCAACATACCCTCAGAGATTGGGAATCTTACTAATTTGATTAGACTATCTTTGGGTGAAAATAGTCTGACTGGACCACTTCCAAGGACTATCAGCAATTTAAAAGCTCTTCAGTTTTTGAATTTTGAAGGCAATCAGCTACAAGGCTTAATCGTTGATGAGATTTGTGAGATTAAGAGACTTGTTTATCTTTATCTAAGTTTAAACAAGTTTTCTGGAGCAATGCCAACTTGCATAGGAAATATGACTTCTTTGCAAAAGCTTTTTGTGGGCTCCAATAAATTGATTTCAGTTATACCTTCTTCCTTTTGGAACTTAAATGATATATTGGAAGTAAATTTATCTTCCAATATTTTAGTTGGAAATCTTTCATTCAAAATTGGAAACTTAAAAGCTCTTACGTTATTGGATTTGTCAAGAAATAATCTTTCAAGCATCATTCCTATAACATTGGGTGGCTTGCAGAATCTACAAATTCTCTCCTTAGCACATAACACATTGCAAGGGAATATTCCTGAAACATTTGGAAATTTGCTAAGCTTGGTAAAGTTGGACCTCTCCCAAAATAATTTGTCTGGTGAAATCCCTAAATCTCTAGAGTCACTTGTTTATCTTAAGAACATCAATCTCTCTTATAATAAATTGCATGGAGAGATTCCAAATGGTGGGGCTTTTAAAAATTTAACTTTTGAGTCTTTCATGATGAATGACGCTCTTTGTGGCCAACCACGGTTGAGAGTGCCTCCATGTAGAAATGGAATAAGAAAAGGATCAATGACTAAATTGATCTTATTAAAAATTATATTACCCATTGTTGTGTCAACAATTTTAGTTGTTTTAGGTATCATACTATGGTGGAAACGACCAAATTCAAAAAATGATCAAGTTGAAAGGAATTGTTCAACTTTAGGAGTACCAAGAAGGATTTCTTATTTTGAGATTGTAGATGCAACTAATGGATTTGATGAGAGTAACTTGATTGGCCGCGGTAGCTATGGTTCTGTGTTCAAAGGAAAGCTTTTCAATGGGATTGTAGTTGCAATTAAAATCTTCAATTTTGATTCAGAAATAATGTCAAGGAGCTTTGAAGTAGAATGTGATACAATGCGTAATGTGCGCCATCGCAATTTGGTGAAGATCATTAGTAGTTGCTCTAATATTGATTTCAAGTGTTTGATAATGGAGTTCATGCCCAAAGGGAGCCTTGAAAAATGGTTATATTCTCATAACTATTGTTTAGACTTTCTTGAAAGATTGAATATAATGATAAACGTAGCATCTGCCTTAGAGTATCTTCATCATGGCTTGTCAACACCAATAGTTCATTGTGATTTAAAGCCAAGTAACATCTTGTTGGATGATAATATGGTTGGTCATGTGAGTGACTTTGGAATTTCCAAACTTTTAGATGAAGGGCAATCAAAGACACATACAGAAACAATTCCTACAATTGGCTATGTCGCACCTGAATATGGATCTTCTGGAGTTGTTTCAACTAAAGTAGATGTATATAGCTATGGAATTATATTGAAAGAAGTCTTCACAAGGAAAAAACCAACCGACAATATGTTTGTTTCAGGATTGAGCTTAAAGGGTTGGGTAAGTGTGTCAATGCCACATGCAATAATTCAAGTCATAGACTCCAATTTATTACAAGAAGATGAACAACATGTTGATCATATCTTACAAGCCACATCCTCTATTTTTGAATTAGCCTTGAGTTGTTGTACTGATATTCCAGAAACACGTAGCAATATGATAGATGTTGTAGTGTCATTAAACAAGATCAAGGCCAAATTTATGCAAGGTCAGAAATGTCATATTTGA 3597 0.3545 MTNLCFHFCVSMSLLLLCLMVCPIICNTTFTTDDSAVLALKFSVTDPHNHLANWSNSSSICDWTGVICDSNDGRVKILKLGGMGLKGALPSQIGNLSFLEELDLHSNSFYGELPKELRKLDKLRILNLSYNQFSGDIPLWIGSLFTLQHLILEKNNLGGVIPLSISNLSKLETLNWRSNFIEGSIPLEIGRLQYLKILRISSNNLSGMIPPSVFNLSSLEQIILSNNSLSGSIPLEIARLQRLKILSISSNNLSGMIPPTISNLYSLEQIVLSFNSLSGVIPKGISNLTNVKYISLSGNLLSGQLPKGIENLTMLEELYLSYNDLQGLQQMDLSQNNLSGSIPSYICHGIPKIQYLSLEFNELSGALPSQWIQCKDLNMFSVASNRFSGHIPREIVNLTMLQELYLPGNVFTGTIPVEIGNLHKLEKLELAMNELSGSIPSIIFNMSTLKLLSLQSNFLSGSLPSNFGSGLPYLEQLYLWGNRLSGRIPKTISNASKLTMMELAYNNFEGALPSTIGHLIYLKTLQLSANDLTIVETSSSENNFLTSLTNCRNLEVLDLSINPLYTKLSKAIGNFSHSLQKMDMHSCKINGNIPSEIGNLTNLIRLSLGENSLTGPLPRTISNLKALQFLNFEGNQLQGLIVDEICEIKRLVYLYLSLNKFSGAMPTCIGNMTSLQKLFVGSNKLISVIPSSFWNLNDILEVNLSSNILVGNLSFKIGNLKALTLLDLSRNNLSSIIPITLGGLQNLQILSLAHNTLQGNIPETFGNLLSLVKLDLSQNNLSGEIPKSLESLVYLKNINLSYNKLHGEIPNGGAFKNLTFESFMMNDALCGQPRLRVPPCRNGIRKGSMTKLILLKIILPIVVSTILVVLGIILWWKRPNSKNDQVERNCSTLGVPRRISYFEIVDATNGFDESNLIGRGSYGSVFKGKLFNGIVVAIKIFNFDSEIMSRSFEVECDTMRNVRHRNLVKIISSCSNIDFKCLIMEFMPKGSLEKWLYSHNYCLDFLERLNIMINVASALEYLHHGLSTPIVHCDLKPSNILLDDNMVGHVSDFGISKLLDEGQSKTHTETIPTIGYVAPEYGSSGVVSTKVDVYSYGIILKEVFTRKKPTDNMFVSGLSLKGWVSVSMPHAIIQVIDSNLLQEDEQHVDHILQATSSIFELALSCCTDIPETRSNMIDVVVSLNKIKAKFMQGQKCHI 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1853 1198 Gene3D Ribonuclease Inhibitor 32 146 IPR032675 -
Prci6g1853 1198 SUPERFAMILY L domain-like 577 833 - -
Prci6g1853 1198 SMART LRR_typ_2 519 542 IPR003591 -
Prci6g1853 1198 SMART LRR_typ_2 600 624 IPR003591 -
Prci6g1853 1198 SMART LRR_typ_2 768 792 IPR003591 -
Prci6g1853 1198 SMART LRR_typ_2 325 349 IPR003591 -
Prci6g1853 1198 SMART LRR_typ_2 120 144 IPR003591 -
Prci6g1853 1198 SMART LRR_typ_2 471 495 IPR003591 -
Prci6g1853 1198 SMART LRR_typ_2 288 312 IPR003591 -
Prci6g1853 1198 SMART LRR_typ_2 720 743 IPR003591 -
Prci6g1853 1198 SMART LRR_typ_2 96 119 IPR003591 -
Prci6g1853 1198 SMART LRR_typ_2 672 695 IPR003591 -
Prci6g1853 1198 SMART LRR_typ_2 422 446 IPR003591 -
Prci6g1853 1198 SMART LRR_typ_2 192 216 IPR003591 -
Prci6g1853 1198 SMART LRR_typ_2 240 264 IPR003591 -
Prci6g1853 1198 SMART LRR_typ_2 744 767 IPR003591 -
Prci6g1853 1198 SUPERFAMILY L domain-like 344 639 - -
Prci6g1853 1198 Gene3D Ribonuclease Inhibitor 155 257 IPR032675 -
Prci6g1853 1198 FunFam Leucine-rich repeat receptor protein kinase EMS1 233 327 - -
Prci6g1853 1198 Gene3D Phosphorylase Kinase; domain 1 894 986 - -
Prci6g1853 1198 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 328 536 - -
Prci6g1853 1198 Gene3D Ribonuclease Inhibitor 258 326 IPR032675 -
Prci6g1853 1198 ProSiteProfiles Protein kinase domain profile. 911 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1853 1198 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1030 1042 IPR008271 GO:0004672|GO:0006468
Prci6g1853 1198 Gene3D Ribonuclease Inhibitor 537 846 IPR032675 -
Prci6g1853 1198 SMART serkin_6 911 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1853 1198 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 987 1195 - -
Prci6g1853 1198 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 546 1184 - -
Prci6g1853 1198 SMART LRR_sd22_2 422 448 - -
Prci6g1853 1198 SMART LRR_sd22_2 720 741 - -
Prci6g1853 1198 SMART LRR_sd22_2 600 626 - -
Prci6g1853 1198 SMART LRR_sd22_2 288 314 - -
Prci6g1853 1198 SMART LRR_sd22_2 672 698 - -
Prci6g1853 1198 SMART LRR_sd22_2 768 794 - -
Prci6g1853 1198 SMART LRR_sd22_2 325 358 - -
Prci6g1853 1198 SMART LRR_sd22_2 240 266 - -
Prci6g1853 1198 SMART LRR_sd22_2 471 497 - -
Prci6g1853 1198 SMART LRR_sd22_2 551 577 - -
Prci6g1853 1198 SMART LRR_sd22_2 744 763 - -
Prci6g1853 1198 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Prci6g1853 1198 SUPERFAMILY Protein kinase-like (PK-like) 890 1183 IPR011009 -
Prci6g1853 1198 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 547 843 - -
Prci6g1853 1198 Gene3D Transferase(Phosphotransferase) domain 1 987 1196 - -
Prci6g1853 1198 ProSitePatterns Protein kinases ATP-binding region signature. 917 939 IPR017441 GO:0005524
Prci6g1853 1198 Pfam Protein kinase domain 912 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1853 1198 SUPERFAMILY L domain-like 54 327 - -
Prci6g1853 1198 Pfam Leucine rich repeat 650 707 IPR001611 GO:0005515
Prci6g1853 1198 Pfam Leucine rich repeat 194 253 IPR001611 GO:0005515
Prci6g1853 1198 Pfam Leucine rich repeat 266 325 IPR001611 GO:0005515
Prci6g1853 1198 Pfam Leucine rich repeat 746 805 IPR001611 GO:0005515
Prci6g1853 1198 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 189 - -
Prci6g1853 1198 Gene3D Ribonuclease Inhibitor 327 536 IPR032675 -
Prci6g1853 1198 FunFam Serine-threonine protein kinase plant-type 892 986 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1853 Prci-Chr6 16558902 16568234 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1853 605 818 Receptor kinase-like Gene Family AT3G47570 29.707 1.95e-18 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g1853 Pkinase 5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1853 - K13420 gmx:100784397 1187.17