Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1852 ATGACAAATCTTTGTTTTCATTTTTGTGTCTCCATGTCCTTATTACTACTTTGTCTCATGGTTTGTCCCATTATATGTAACACCACTTTTACCACTGATGACTCTGCAGTTCTTGCCCTCAAATTTTCAGTGACCGATCCTCACAATCACTTGGCTAATTGGTCCAACTCTTCTTCAATTTGCGATTGGACTGGTGTTATATGTGATTCCAATGATGGGAGAGTCAAGATCTTGAAACTTGGCGGGATGGGTCTCAAGGGCGCCTTACCCTCGCAAATTGGTAATTTGTCTTTTCTGGAGGAACTTGACCTTCACAGCAATAGTTTTTACGGTGAGTTGCCAAAAGAGTTACGGAAGTTAGACAAGTTAAGAATTCTCAACTTGAGCTACAATCAATTTAGTGGAGATATTCCATTATGGATAGGAAGCTTATTCACACTTCAACACTTGATTCTCGAAAAAAATAATCTTGGGGGTGTTATTCCTTTAAGCATATCCAATTTGTCAAAGCTGGAGACTTTAAATTGGAGATCTAATTTCATAGAAGGATCCATTCCACTTGAGATTGGAAGGCTTCAATACTTGAAGATTTTACGCATTTCATCAAACAACCTTTCAGGGATGATACCTCCAAGTGTTTTTAACTTATCCTCACTTGAGCAGATCATTTTGTCCAACAATTCCTTATCAGGATCCATTCCACTTGAGATTGCAAGACTTCAACGTTTGAAGATTTTAAGCATTTCATCAAACAACCTTTCAGGAATGATACCTCCAACTATTTCTAACCTATACTCACTTGAACAAATCGTTTTGTCCTTCAATTCCTTATCAGGAGTTATTCCTAAAGGAATCAGTAATCTGACAAATGTAAAGTACATATCTTTAAGTGGAAATCTGCTGTCTGGACAATTACCAAAAGGCATTGAAAACTTGACTATGCTTGAAGAGTTATATCTTTCTTACAATGACTTGCAAGGAAGTATTCCAAAAGAGATTGGTGAACTTCATAATTTGAAAACAATATCCTTGGGTGTTAATGAGTTTTTTGGTCAAATACCATCAACTATCTTCAACATTTCAGGGTTGCAACAGATGGATTTGAGTCAGAATAATTTGTCAGGGAGCATCCCCTCATATATATGTCATGGGATTCCAAAAATCCAATATCTGTCTCTTGAATTCAATGAATTGTCTGGTGCCTTACCATCTCAATGGATACAATGCAAGGATCTCAACATGTTTTCAGTAGCCTCCAATAGATTTAGTGGACACATTCCAAGGGAGATTGTAAACCTCACTATGCTTCAAGAATTATATTTGCCTGGAAACGTTTTCACAGGTACAATTCCTGTGGAAATAGGCAATCTTCATAAGCTTGAGAAATTAGAGTTGGCAATGAATGAATTGAGTGGATCTATTCCCTCAATAATTTTTAACATGTCAACTTTGAAACTCTTGTCTCTACAAAGCAATTTTCTGTCAGGTAGTCTTCCATCAAATTTTGGAAGTGGCCTTCCATATTTGGAACAACTGTATTTATGGGGAAACAGACTTTCTGGAAGAATCCCAAAGACTATATCCAATGCTTCTAAGCTAACAATGATGGAATTGGCATACAACAACTTTGAAGGGGCTTTACCTAGCACGATTGGGCATTTAATATACTTGAAAACCCTTCAATTATCTGCTAATGATTTAACCATTGTAGAAACTTCCAGTTCTGAAAACAACTTCCTTACCTCATTGACAAATTGTAGAAATTTGGAAGTCTTGGATCTCTCAATAAATCCATTGTATACAAAACTTTCCAAAGCCATTGGAAACTTCTCTCATTCCCTACAGAAGATGGATATGCACTCTTGCAAAATTAATGGCAACATACCCTCAGAGATTGGGAATCTTACTAATTTGATTAGACTATCTTTGGGTGAAAATAGTCTGACTGGACCACTTCCAAGGACTATCAGCAATTTAAAAGCTCTTCAGTTTTTGAATTTTGAAGGCAATCAGCTACAAGGCTTAATCGTTGATGAGATTTGTGAGATTAAGAGACTTGTTTATCTTTATCTAAGTTTAAACAAGTTTTCTGGAGCAATGCCAACTTGCATAGGAAATATGACTTCTTTGCAAAAGCTTTTTGTGGGCTCCAATAAATTGATTTCAGTTATACCTTCTTCCTTTTGGAACTTAAATGATATATTGGAAGTAAATTTATCTTCCAATATTTTAGTTGGAAATCTTTCATTCAAAATTGGAAACTTAAAAGCTCTTACGTTATTGGATTTGTCAAGAAATAATCTTTCAAGCATCATTCCTATAACATTGGGTGGCTTGCAGAATCTACAAATTCTCTCCTTAGCACATAACACATTGCAAGGGAATATTCCTGAAACATTTGGAAATTTGCTAAGCTTGGTAAAGTTGGACCTCTCCCAAAATAATTTGTCTGGTGAAATCCCTAAATCTCTAGAGTCACTTGTTTATCTTAAGAACATCAATCTCTCTTATAATAAATTGCATGGAGAGATTCCAAATGGTGGGGCTTTTAAAAATTTAACTTTTGAGTCTTTCATGATGAATGACGCTCTTTGTGGCCAACCACGGTTGAGAGTGCCTCCATGTAGAAATGGAATAAGAAAAGGATCAATGACTAAATTGATCTTATTAAAAATTATATTACCCATTGTTGTGTCAACAATTTTAGTTGTTTTAGGTATCATACTATGGTGGAAACGACCAAATTCAAAAAATGATCAAGTTGAAAGGAATTGTTCAACTTTAGGAGTACCAAGAAGGATTTCTTATTTTGAGATTGTAGATGCAACTAATGGATTTGATGAGAGTAACTTGATTGGCCGCGGTAGCTATGGTTCTGTGTTCAAAGGAAAGCTTTTCAATGGGATTGTAGTTGCAATTAAAATCTTCAATTTTGATTCAGAAATAATGTCAAGGAGCTTTGAAGTAGAATGTGATACAATGCGTAATGTGCGCCATCGCAATTTGGTGAAGATCATTAGTAGTTGCTCTAATATTGATTTCAAGTGTTTGATAATGGAGTTCATGCCCAAAGGGAGCCTTGAAAAATGGTTATATTCTCATAACTATTGTTTAGACTTTCTTGAAAGATTGAATATAATGATAAACGTAGCATCTGCCTTAGAGTATCTTCATCATGGCTTGTCAACACCAATAGTTCATTGTGATTTAAAGCCAAGTAACATCTTGTTGGATGATAATATGGTTGGTCATGTGAGTGACTTTGGAATTTCCAAACTTTTAGATGAAGGGCAATCAAAGACACATACAGAAACAATTCCTACAATTGGCTATGTCGCACCTGGATTGAGCTTAAAGGGTTGGGTAAGTGTGTCAATGCCACATGCAATAATTCAAGTCATAGACTCCAATTTATTACAAGAAGATGAACAACATGTTGATCATATCTTACAAGCCACATCCTCTATTTTTGAATTAGCCTTGAGTTGTTGTACTGATATTCCAGAAACACGTAGCAATATGATAGATGTTGTAGTGTCATTAAACAAGATCAAGGCCAAATTTATGCAAGGTCAGAAATGTCATATTTGA 3591 0.3545 MTNLCFHFCVSMSLLLLCLMVCPIICNTTFTTDDSAVLALKFSVTDPHNHLANWSNSSSICDWTGVICDSNDGRVKILKLGGMGLKGALPSQIGNLSFLEELDLHSNSFYGELPKELRKLDKLRILNLSYNQFSGDIPLWIGSLFTLQHLILEKNNLGGVIPLSISNLSKLETLNWRSNFIEGSIPLEIGRLQYLKILRISSNNLSGMIPPSVFNLSSLEQIILSNNSLSGSIPLEIARLQRLKILSISSNNLSGMIPPTISNLYSLEQIVLSFNSLSGVIPKGISNLTNVKYISLSGNLLSGQLPKGIENLTMLEELYLSYNDLQGSIPKEIGELHNLKTISLGVNEFFGQIPSTIFNISGLQQMDLSQNNLSGSIPSYICHGIPKIQYLSLEFNELSGALPSQWIQCKDLNMFSVASNRFSGHIPREIVNLTMLQELYLPGNVFTGTIPVEIGNLHKLEKLELAMNELSGSIPSIIFNMSTLKLLSLQSNFLSGSLPSNFGSGLPYLEQLYLWGNRLSGRIPKTISNASKLTMMELAYNNFEGALPSTIGHLIYLKTLQLSANDLTIVETSSSENNFLTSLTNCRNLEVLDLSINPLYTKLSKAIGNFSHSLQKMDMHSCKINGNIPSEIGNLTNLIRLSLGENSLTGPLPRTISNLKALQFLNFEGNQLQGLIVDEICEIKRLVYLYLSLNKFSGAMPTCIGNMTSLQKLFVGSNKLISVIPSSFWNLNDILEVNLSSNILVGNLSFKIGNLKALTLLDLSRNNLSSIIPITLGGLQNLQILSLAHNTLQGNIPETFGNLLSLVKLDLSQNNLSGEIPKSLESLVYLKNINLSYNKLHGEIPNGGAFKNLTFESFMMNDALCGQPRLRVPPCRNGIRKGSMTKLILLKIILPIVVSTILVVLGIILWWKRPNSKNDQVERNCSTLGVPRRISYFEIVDATNGFDESNLIGRGSYGSVFKGKLFNGIVVAIKIFNFDSEIMSRSFEVECDTMRNVRHRNLVKIISSCSNIDFKCLIMEFMPKGSLEKWLYSHNYCLDFLERLNIMINVASALEYLHHGLSTPIVHCDLKPSNILLDDNMVGHVSDFGISKLLDEGQSKTHTETIPTIGYVAPGLSLKGWVSVSMPHAIIQVIDSNLLQEDEQHVDHILQATSSIFELALSCCTDIPETRSNMIDVVVSLNKIKAKFMQGQKCHI 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1852 1196 SMART LRR_typ_2 554 577 IPR003591 -
Prci6g1852 1196 SMART LRR_typ_2 707 730 IPR003591 -
Prci6g1852 1196 SMART LRR_typ_2 120 144 IPR003591 -
Prci6g1852 1196 SMART LRR_typ_2 360 384 IPR003591 -
Prci6g1852 1196 SMART LRR_typ_2 779 802 IPR003591 -
Prci6g1852 1196 SMART LRR_typ_2 457 481 IPR003591 -
Prci6g1852 1196 SMART LRR_typ_2 312 336 IPR003591 -
Prci6g1852 1196 SMART LRR_typ_2 288 311 IPR003591 -
Prci6g1852 1196 SMART LRR_typ_2 755 778 IPR003591 -
Prci6g1852 1196 SMART LRR_typ_2 96 119 IPR003591 -
Prci6g1852 1196 SMART LRR_typ_2 635 659 IPR003591 -
Prci6g1852 1196 SMART LRR_typ_2 506 530 IPR003591 -
Prci6g1852 1196 SMART LRR_typ_2 803 827 IPR003591 -
Prci6g1852 1196 SMART LRR_typ_2 240 264 IPR003591 -
Prci6g1852 1196 SMART LRR_typ_2 192 216 IPR003591 -
Prci6g1852 1196 SUPERFAMILY RNI-like 78 439 - -
Prci6g1852 1196 SUPERFAMILY L domain-like 612 868 - -
Prci6g1852 1196 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 582 1182 - -
Prci6g1852 1196 Gene3D Transferase(Phosphotransferase) domain 1 1022 1126 - -
Prci6g1852 1196 Pfam Leucine rich repeat 194 253 IPR001611 GO:0005515
Prci6g1852 1196 Pfam Leucine rich repeat 266 325 IPR001611 GO:0005515
Prci6g1852 1196 Pfam Leucine rich repeat 685 742 IPR001611 GO:0005515
Prci6g1852 1196 Pfam Leucine rich repeat 781 840 IPR001611 GO:0005515
Prci6g1852 1196 ProSitePatterns Protein kinases ATP-binding region signature. 952 974 IPR017441 GO:0005524
Prci6g1852 1196 SUPERFAMILY L domain-like 419 625 - -
Prci6g1852 1196 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 582 878 - -
Prci6g1852 1196 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Prci6g1852 1196 SUPERFAMILY Protein kinase-like (PK-like) 925 1181 IPR011009 -
Prci6g1852 1196 Gene3D Ribonuclease Inhibitor 575 881 IPR032675 -
Prci6g1852 1196 Gene3D Ribonuclease Inhibitor 384 505 IPR032675 -
Prci6g1852 1196 Gene3D Ribonuclease Inhibitor 179 280 IPR032675 -
Prci6g1852 1196 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 189 - -
Prci6g1852 1196 Gene3D Phosphorylase Kinase; domain 1 929 1021 - -
Prci6g1852 1196 Gene3D Ribonuclease Inhibitor 506 574 IPR032675 -
Prci6g1852 1196 SMART serkin_6 946 1189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1852 1196 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 384 572 - -
Prci6g1852 1196 Pfam Protein kinase domain 947 1114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1852 1196 Gene3D Ribonuclease Inhibitor 29 178 IPR032675 -
Prci6g1852 1196 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 227 383 - -
Prci6g1852 1196 Gene3D Ribonuclease Inhibitor 281 383 IPR032675 -
Prci6g1852 1196 FunFam Serine-threonine protein kinase plant-type 927 1021 - -
Prci6g1852 1196 ProSiteProfiles Protein kinase domain profile. 946 1196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1852 1196 SMART LRR_sd22_2 755 776 - -
Prci6g1852 1196 SMART LRR_sd22_2 707 733 - -
Prci6g1852 1196 SMART LRR_sd22_2 635 661 - -
Prci6g1852 1196 SMART LRR_sd22_2 288 314 - -
Prci6g1852 1196 SMART LRR_sd22_2 779 798 - -
Prci6g1852 1196 SMART LRR_sd22_2 506 532 - -
Prci6g1852 1196 SMART LRR_sd22_2 803 829 - -
Prci6g1852 1196 SMART LRR_sd22_2 240 266 - -
Prci6g1852 1196 SMART LRR_sd22_2 457 483 - -
Prci6g1852 1196 SMART LRR_sd22_2 336 362 - -
Prci6g1852 1196 SMART LRR_sd22_2 586 612 - -
Prci6g1852 1196 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1065 1077 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1852 Prci-Chr6 16558902 16568234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1852 679 846 Receptor kinase-like Gene Family AT3G47570 33.143 3.72e-15 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g1852 Pkinase 3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1852 - K13420 gmx:100784397 1134.4