Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1847 ATGGATATTCCTGCAGACTCTGCAACAGTTGAATCTCAGGAGCGAAGAACATTCGCTCTTCCTGTGGATTCTGAACACAAGGCCACAGAGTTCAAATTATTCTCAGTGGCTAAGCCTCACATGCGAGCATTTCATCTTTCATGGATTTCCTTCTTCTCATGCTTCGTCTCAAGCTTCGCTGCGCCTCCTCTGCTTCCCATAATTCGTGATAATCTCAACCTGACAGCCACAGACATTGGAAATGCTGGGATTGCTTCTGTTTCTGGTGCGGTTTTCGCGCGAATCGCCATGGGCACTGCTTGTGACTTGTTTGGCCCTCGTCTTGCTTCTGCTTCTATCATTCTCCTTATAGCACCAGCAGTTTGTCTCTCCTCCATTATCTCATCTCCTACCTCCTTCCTTCTCGTTCGCTTCCTCACCGGCTTCTCTTTGTCCACCTTCGTCTCAACCCAGTTCTGGATGAGCTCCATGTTCTCTTCCCGAGTCGTCGCTTCGGCTAATGGACTTGCAGGTGGATGGGGCAACCTAGGAGGAGGAGCCACACAACTTGTGATGCCTATTGTATTTGGACTCATACGTGATATTGGAGCAGTCAAATTCACAGCATGGCGAATAGCTTTCTTCATTCCTGCCATTTTTCAAATGTTAACAGCTTTTGCAGTGTTCATATTTGGCCAGGATTTGCCAGATGGGAATTTCCATGGCTTGAAGAAATCAGGGGAAAAGCCAAAAGATGACTTGAACAAAGTTTTGTTCTTTGGGGTTTCAAATTACAGAGGCTGGATTTTGGCTTTGACTTATGGATATTGCTTCGGAGTCGAACTTACAATCGACAACATCATAGCTGAATACTTCTATGACAGATTTAATCTGAATCTTCGCACAGCAGGAATAATTGCTGCAAGCTTTGGATTAGCTAATGTATTTTCTCGACCTGGAGGAGGCTATATATCAGATTTAGTGGCAAAGAGGTTTGGAATGAGAGGTCGGCTTTGGGCCTTATGGTTGTGTCAAACTTTGGGAGGTGTGTTCTGTGTAATACTTGGGAAGGTGGCATCTTTAACAGTGTCCATCATCGTCATGGTCATATTCTCTATATTCATTCAAGCTGCCTGTGGGATGACATTTGGGGTGGTTCCTTTCGTCTCTAGAAGATCATTGGGGGTCATATCTGGAATGACAGGAGGTGGAGGAAGTGTGGGTGCTGTGATAACCCAGTTAATATTCTTCAGAGGATCAAAATATTCAAAAGAAACTGGTATAACCTTAATGGGTTTGATGATCATAATCTGTACTCTCCCAATATGTTTGATTTATTTCCCACAATGGGGTGGCATGTTTTGTGATCCATCGTCTGAGAAAGTTGCAGAAGAAGATTACTACTTGTCTGAGTGGAGCTCAGAGGAACAAGAGAAAGGGTCTCACCATGCAAGCTTGAAGTTTGCAGATAATAGTAGAAGTGAACGAGGCAGAAGTTTGCCAGGTCACCATGTGTTTGATTCTCACAATTAA 1512 0.4418 MDIPADSATVESQERRTFALPVDSEHKATEFKLFSVAKPHMRAFHLSWISFFSCFVSSFAAPPLLPIIRDNLNLTATDIGNAGIASVSGAVFARIAMGTACDLFGPRLASASIILLIAPAVCLSSIISSPTSFLLVRFLTGFSLSTFVSTQFWMSSMFSSRVVASANGLAGGWGNLGGGATQLVMPIVFGLIRDIGAVKFTAWRIAFFIPAIFQMLTAFAVFIFGQDLPDGNFHGLKKSGEKPKDDLNKVLFFGVSNYRGWILALTYGYCFGVELTIDNIIAEYFYDRFNLNLRTAGIIAASFGLANVFSRPGGGYISDLVAKRFGMRGRLWALWLCQTLGGVFCVILGKVASLTVSIIVMVIFSIFIQAACGMTFGVVPFVSRRSLGVISGMTGGGGSVGAVITQLIFFRGSKYSKETGITLMGLMIIICTLPICLIYFPQWGGMFCDPSSEKVAEEDYYLSEWSSEEQEKGSHHASLKFADNSRSERGRSLPGHHVFDSHN 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1847 503 CDD MFS_NRT2_like 44 437 IPR044772 GO:0015112
Prci6g1847 503 Pfam Major Facilitator Superfamily 48 404 IPR011701 GO:0022857|GO:0055085
Prci6g1847 503 SUPERFAMILY MFS general substrate transporter 34 439 IPR036259 -
Prci6g1847 503 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 8 491 IPR044772 GO:0015112
Prci6g1847 503 MobiDBLite consensus disorder prediction 467 503 - -
Prci6g1847 503 FunFam High affinity nitrate transporter 2.5 36 232 - -
Prci6g1847 503 Gene3D MFS general substrate transporter like domains 252 444 IPR036259 -
Prci6g1847 503 Gene3D MFS general substrate transporter like domains 35 232 IPR036259 -
Prci6g1847 503 ProSiteProfiles Major facilitator superfamily (MFS) profile. 43 443 IPR020846 GO:0022857
Prci6g1847 503 FunFam Nitrate transporter 2.1 244 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1847 Prci-Chr6 16331177 16336545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1847 16 496 Inorganic Solute Cotransporters AT1G12940 74.636 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1847 K02575 - gmx:100787888 794.653