Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1831 ATGGCTCAACCACACTCTCCGTCAAAGACTCTTATCGACCCAGAGAACAAGCAATCACCAGAAGAAGAGAGCTTCTCACATGCGATGCAGCTCGTGACATCTATTGCGACTTCCATGGCGCTGCAAACGGCGGTGCAGCTCGGCGTGTTTGAGGTCATTCATAGAGCCGGTCCCGGCGTCGAGATCTCCGCCGCTGACATAGCGTCGGAGCTTTCTTGCAAGAACCCAGAAGCAGCTTCCGCACTGGATCGACTCCTCCATCTTCTAGCGTCTCACTCAATTCTTTGTTGTTCCGTTATCGGCGATGAGAACCGAGGGTCGGGATGTTTCAGGCGGTTGTACAGCCTCTCTCCGGTGGCCAAATTCTTCGTTCGAAATGCGGATGGTGCAACGTTAGGTTCCTTGATTGAATTGCTTCATGATAAGGTCTTCGTGGATAGCTGGTCCCAATTGAAAGATGCAATATTGGACGGGGGTATCTCATTCAATAGGGTCCATGGATCACATCTTTTTGAATATCTAAGATTGGACTCCAGAGTCAACCATGTCTTTAGCAAAGCGATGAAGAATCACAGCACTATAGTTATGAACAAGATTCTTGAATCCTACCGAGGTTTTGGGGACATCACTAGACTCGTCGATGTTGGTGGAGGTCTTGGGATTACTCTCAAGTTGATCACATCCAAATATCCAAACATTCAAGGAATCAATTTCGACTTGCCTCATGTCATTCAACATGCGCCTTCTTATCCTGGAGTGGAGCACGTAGGAGGAGATATGTTTGAAAGCGTGCCAAGAGGAGATGCCATCTTCATGAAGTGGATACTTCATGATTGGAGTGATGAATGGTGCTTGAAGCTGTTGAAGAATTGCCATGACGCCATTCCTAAAGATGGAAAGGTGATTGTGGTGGAGGCAGTTTTACCATTTGTATCAGAAACTTCTGCTGCAGCGAAAAGCATCACCCAAAGTGATGTGATGATGTTGACTTATTGCTCAGGTGGCAAGGAGAGAACTGAGCATGAGTTCATGAAATTGGCTACATCAGCTGGGTTTAGAGGCATCAGATTTGACTGCTTCGTTCGAAACTTTTGGATTATGGAGTTCTTCAAATAG 1116 0.4659 MAQPHSPSKTLIDPENKQSPEEESFSHAMQLVTSIATSMALQTAVQLGVFEVIHRAGPGVEISAADIASELSCKNPEAASALDRLLHLLASHSILCCSVIGDENRGSGCFRRLYSLSPVAKFFVRNADGATLGSLIELLHDKVFVDSWSQLKDAILDGGISFNRVHGSHLFEYLRLDSRVNHVFSKAMKNHSTIVMNKILESYRGFGDITRLVDVGGGLGITLKLITSKYPNIQGINFDLPHVIQHAPSYPGVEHVGGDMFESVPRGDAIFMKWILHDWSDEWCLKLLKNCHDAIPKDGKVIVVEAVLPFVSETSAAAKSITQSDVMMLTYCSGGKERTEHEFMKLATSAGFRGIRFDCFVRNFWIMEFFK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1831 371 Pfam O-methyltransferase domain 148 353 IPR001077 GO:0008171
Prci6g1831 371 PANTHER O-METHYLTRANSFERASE 28 357 IPR016461 GO:0008168
Prci6g1831 371 Gene3D Vaccinia Virus protein VP39 124 371 IPR029063 -
Prci6g1831 371 SUPERFAMILY "Winged helix" DNA-binding domain 20 126 IPR036390 -
Prci6g1831 371 Gene3D - 7 123 IPR036388 -
Prci6g1831 371 Pfam Dimerisation domain 39 90 IPR012967 GO:0046983
Prci6g1831 371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 371 IPR016461 GO:0008168
Prci6g1831 371 PIRSF O-mtase 9 371 IPR016461 GO:0008168
Prci6g1831 371 FunFam Caffeic acid O-methyltransferase 124 371 - -
Prci6g1831 371 MobiDBLite consensus disorder prediction 1 23 - -
Prci6g1831 371 FunFam Caffeic acid 3-O-methyltransferase 8 123 - -
Prci6g1831 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 369 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1831 Prci-Chr6 16080234 16083736 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1831 18 371 Monolignol Biosynthesis Gene Families AT5G54160 51.821 2.39e-132 381