Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1826 ATGGCAAACTTTTGTCTTCAGTATTTCTCCTTCTTCCTCTTTTCACTGCTTTGTCTCATGGCTTGTCTCACTTTATCTCACACCAATTTTACCATGAATGATGAAATGACACTTCTTGCTTTCAAGTTTTCCATCAAAGACCCTTACAATCACTTGGCTAATTGGTCCAACTCTTCTTCCATTTGTAATTGGGTTGGAGTTACATGTGATGCTCATAACAGAGTAAGAATCTTGAATCTTGCTGAGATGGGTCTCAATGGCACCTTACCCTCACAACTTGGGAATCTCTCCTTTTTAGTGGAACTTGACCTTCACAGAAACAACTTTTATGGAGTTATTCCCGAAAAAATTAGCCATCTCACAAAGCTGGAGGTTGTAAAGTTGGCTGCTAATCAACTATCTGGCTACATACCGGAGAATATTGGGAACTTAACTATGCTTCAAGGCATAATTCTTGACCGCAATAACCTACAAGGTCCCATGCCAACAGATTGGAATCGATGTAAGGAGCTCAAAATCTTGTCGTCATCTTTCACCACATTGAGTGGACACATACCAAGTGAGATCGGAAACTTAACAAAGCTTCAAGAATTATATTTAGTAGCCAACTTTTTCACAGGGACAATACCTATGGAAATAGGCAATCTTCATGAACTTAAGATATTACAACTGGCACAGAACAATTTGAGCGGATCTATTCCATCAAAAATTTTTAACATGTCAGCTTTGAATATCTTGTCCATATCAAACAATTCTATATCTGGTAGACTTCCAGAAGATTTTGGATGTGGTCTTTCTAATCTAGACGAGATATATTTATGGGGCAACAAACTTTCTGGAAGAATCCCGAATACTATATCCAATGCTTCTAAGCTAACCAGAATAGAATTGCAGAAAAACAAATTCACGGGAGTTTTACCAAGCACACTTGGTCATTTAAGATACTTAAAAATCCTTGTAGTATATCACAACAATTTGACCACCGCAGATGCTTCCAATTCTAAGACTAAGACTAGCTTTCTTAGCTCATTGTCAAATTGTAGACAATTGGAAGTCTTGGATCTCTCAATAAATCCATTGTATATAAAACTTCCCAAATCCATTGGAAACTTGTCAAGTTCTTTACAAAGGTTGATCTTACATTATTCTGGTATTCATGGAAACATTCCATCAGAAATAGGGAATCTCACTAATTTGGTGGTAATATCTTTGGATGGAAATGTTTTGAATGGAACAATTCCAAAAACAATTGGTAGCTTACAAGCTCTTCAGTATTTGAGTATTGAATTCAATGAGCTAGTTGGTTTGATCATTGCTGAGCTTTGTCAAATCAAGCAACTTGCCTATTTGCAGCTAAGTGGAAATAAGTTTTTTGGAACAATGCCACATTGCTTAGGAGATCTTACCTCTTTACGATACCTTCATTTAGGCTCCAATAAGTTGAGTTCAATGATACCTTCACCTCTTTGGAATTTAAAAGATATATTGGAAGTCAACTTATCTTCTAATAATTTTGTTGGAAATCTTTCATACAAGATTGGGAATTTAAAAGCTCTCGTGTCATTGGATTTGTCAAGAAATCAAATTTCAGGCATCATTCCAACAACCATGGGTAATTTGCAAAATTTGAAAATTCTCTCCTTAGCTATTAATGAACTGCAAGGGCATATTCCTGAATCATTTGGGAATTTGCTAAGCTTAGAAAGTTTGAACCTCTCTCAAAATTATTTGTCTGGCGAGATCCCTAAATCTCTAGAATCACTTACATATCTTGAGTTTGTCAATCTTTCCTACAACAAACTACAAGGAGAAATTCCAAGTGGAGGAGTTTTCACAAATTTAACTGCTCAATCTCTCATGATGAATGAAGGTCTTTGTGGCCAACCACAATTAGAAGTTCCTCCATGCAAAAAAGGAAGAAAAAAGTCAATGGCAAGGTTGATTTTTTTGAAATGCATATTACCTGTGGTTGTGTCAACAATAATTGTTGTATTAGCCATTACCCTTTTACAACATAAACGACAAAACACAAGGGATGCAATTGAAAGGGATTTATCAACTTTTGGAGTACCAAGAAGGATTTCTTATTTTGAAATCTTGGAAGCAACCAATAGATTTGATGATTGCAACTTACTAGGAAAGGGCGGTTATGGTTCTGTGTACAAAGGAAGGCTGTCAAGTGGGATGATGGTCGCAATTAAAATCTTCAATTCTAATTTAGAACAAATGTTAAGGAGCTTTGAAGTAGAATGTGACATCATGCGTAATTTGCGCCATCGTAACTTAGTCAAGATCATTAGCAGTTGTTGTAATATTAATTTCAGGTCTTTGATTATGGAGTTCATGCCCAATGGGAGTCTTGAAAAATGGTTACATTCTCATACAAATTGTTTAGATTTTCTACAAAGATTGAATATTATGATAAATGTAGCGCATGCTTTGGAGTACCTCCATCATGGCTTGTCAACTCCAGTGGTTCATTGTGATTTAAAGCCAAGTAACATCTTATTGAATGATGATATGGTTGCACATGTAAGTGATTTTGGAATTTCCAAACTTTTAGCTGAAGGGCAATCTATGACATATACAAAGACAATACCTACAATTGGCTATATAGCGCCTGAATATGGATATGGAGGAATTGTTTCAACTAAAGTAGATGTGTATAGTTATGGAATTATATTATTAGAAGTCTTCACAAGAAAAAGGCCAACAGATGATATGTTTGCGCCAGGATTGAACTTGAAGAGTTGGGTAAGTGAGTTAATGTCACATGCAATAGTTCAACTCATGGATTCCAATCTAATAGAAGGAGATGAATGGCATATTGAAAACATTATGACATCTGCTTCCTCAATTTTTGAATTGGCCTTGAAGTGTTGCAATGATTCTCCAGAAACACGTAGCAATATGATAGATGTAGCAACATCTTTAAACAAGGTCAAGGTCAAGTATATGCAAAGGCAGAAAATCATACAAAAATAA 2985 0.3561 MANFCLQYFSFFLFSLLCLMACLTLSHTNFTMNDEMTLLAFKFSIKDPYNHLANWSNSSSICNWVGVTCDAHNRVRILNLAEMGLNGTLPSQLGNLSFLVELDLHRNNFYGVIPEKISHLTKLEVVKLAANQLSGYIPENIGNLTMLQGIILDRNNLQGPMPTDWNRCKELKILSSSFTTLSGHIPSEIGNLTKLQELYLVANFFTGTIPMEIGNLHELKILQLAQNNLSGSIPSKIFNMSALNILSISNNSISGRLPEDFGCGLSNLDEIYLWGNKLSGRIPNTISNASKLTRIELQKNKFTGVLPSTLGHLRYLKILVVYHNNLTTADASNSKTKTSFLSSLSNCRQLEVLDLSINPLYIKLPKSIGNLSSSLQRLILHYSGIHGNIPSEIGNLTNLVVISLDGNVLNGTIPKTIGSLQALQYLSIEFNELVGLIIAELCQIKQLAYLQLSGNKFFGTMPHCLGDLTSLRYLHLGSNKLSSMIPSPLWNLKDILEVNLSSNNFVGNLSYKIGNLKALVSLDLSRNQISGIIPTTMGNLQNLKILSLAINELQGHIPESFGNLLSLESLNLSQNYLSGEIPKSLESLTYLEFVNLSYNKLQGEIPSGGVFTNLTAQSLMMNEGLCGQPQLEVPPCKKGRKKSMARLIFLKCILPVVVSTIIVVLAITLLQHKRQNTRDAIERDLSTFGVPRRISYFEILEATNRFDDCNLLGKGGYGSVYKGRLSSGMMVAIKIFNSNLEQMLRSFEVECDIMRNLRHRNLVKIISSCCNINFRSLIMEFMPNGSLEKWLHSHTNCLDFLQRLNIMINVAHALEYLHHGLSTPVVHCDLKPSNILLNDDMVAHVSDFGISKLLAEGQSMTYTKTIPTIGYIAPEYGYGGIVSTKVDVYSYGIILLEVFTRKRPTDDMFAPGLNLKSWVSELMSHAIVQLMDSNLIEGDEWHIENIMTSASSIFELALKCCNDSPETRSNMIDVATSLNKVKVKYMQRQKIIQK 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1826 994 Pfam Leucine rich repeat 542 601 IPR001611 GO:0005515
Prci6g1826 994 Pfam Leucine rich repeat 218 278 IPR001611 GO:0005515
Prci6g1826 994 Pfam Leucine rich repeat 446 505 IPR001611 GO:0005515
Prci6g1826 994 Gene3D Ribonuclease Inhibitor 31 184 IPR032675 -
Prci6g1826 994 Gene3D Phosphorylase Kinase; domain 1 689 781 - -
Prci6g1826 994 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 142 335 - -
Prci6g1826 994 FunFam Leucine-rich repeat receptor-like kinase 34 140 - -
Prci6g1826 994 SUPERFAMILY Protein kinase-like (PK-like) 686 978 IPR011009 -
Prci6g1826 994 PRINTS Leucine-rich repeat signature 564 577 - -
Prci6g1826 994 PRINTS Leucine-rich repeat signature 519 532 - -
Prci6g1826 994 ProSiteProfiles Leucine-rich repeat profile. 566 589 IPR001611 GO:0005515
Prci6g1826 994 Gene3D Transferase(Phosphotransferase) domain 1 782 993 - -
Prci6g1826 994 CDD STKc_IRAK 712 980 - -
Prci6g1826 994 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 782 991 - -
Prci6g1826 994 SUPERFAMILY L domain-like 373 630 - -
Prci6g1826 994 Gene3D Ribonuclease Inhibitor 185 329 IPR032675 -
Prci6g1826 994 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Prci6g1826 994 PANTHER OS04G0122200 PROTEIN 205 986 - -
Prci6g1826 994 SMART LRR_typ_2 120 144 IPR003591 -
Prci6g1826 994 SMART LRR_typ_2 96 119 IPR003591 -
Prci6g1826 994 SMART LRR_typ_2 216 240 IPR003591 -
Prci6g1826 994 SMART LRR_typ_2 564 588 IPR003591 -
Prci6g1826 994 SMART LRR_typ_2 516 539 IPR003591 -
Prci6g1826 994 SMART LRR_typ_2 468 492 IPR003591 -
Prci6g1826 994 SMART LRR_typ_2 265 289 IPR003591 -
Prci6g1826 994 SMART LRR_typ_2 396 420 IPR003591 -
Prci6g1826 994 SMART LRR_typ_2 540 563 IPR003591 -
Prci6g1826 994 ProSiteProfiles Protein kinase domain profile. 706 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1826 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Prci6g1826 994 SMART serkin_6 706 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1826 994 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 343 640 - -
Prci6g1826 994 SUPERFAMILY L domain-like 55 327 - -
Prci6g1826 994 Gene3D Ribonuclease Inhibitor 330 644 IPR032675 -
Prci6g1826 994 Pfam Protein kinase domain 709 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1826 994 ProSitePatterns Protein kinases ATP-binding region signature. 712 734 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1826 Prci-Chr6 15938748 15945616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1826 34 994 Receptor kinase-like Gene Family AT3G47570 37.500 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g1826 Pkinase 4.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1826 - K13420 qsa:O6P43_031966 948.347