Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1825 ATGGCAAACTTTTGTCTTCAGTATTTCTCCTTCTTCCTCTTTTCACTGCTTTGTCTCATGGCTTGTCTCACTTTATCTCACACCAATTTTACCATGAATGATGAAATGACACTTCTTGCTTTCAAGTTTTCCATCAAAGACCCTTACAATCACTTGGCTAATTGGTCCAACTCTTCTTCCATTTGTAATTGGGTTGGAGTTACATGTGATGCTCATAACAGAGTAAGAATCTTGAATCTTGCTGAGATGGGTCTCAATGGCACCTTACCCTCACAACTTGGGAATCTCTCCTTTTTAGTGGAACTTGACCTTCACAGAAACAACTTTTATGGTCAGTTACCAAAAGAGTTGTTTCAGTTACAGAAGTTGGAAATTCTCAACTTGAGTAATAACACATTAAGTGGAGAAATTTCTTGGATTCCAAGCTTGTTTACCCTTCAACAATTGATTCTTCATCATAATGGTTTTGGAGGTGTTATTCCCACAAGTGTATACAATTTATCAAAGTTAGTGACCCTGGATTGGAGTTTCAACTTTATCCAAGGATCTATTCCACTTGAGATTGGAAAACTTCAACACTTGAGGATTTTAAACATTGCAATGAACAAGCTTTCAGGAAGAGTTATTCCCGAAAAAATTAGCCATCTCACAAAGCTGGAGGTTGTAAAGTTGGCTGCTAATCAACTATCTGGCTACATACCGGAGAATATTGGGAACTTAACTATGCTTCAAGGCATAATTCTTGACCGCAATAACCTACAAGGTCCCATGCCAACAGATTGGAATCGATGTAAGGAGCTCAAAATCTTGTCGTCATCTTTCACCACATTGAGTGGACACATACCAAGTGAGATCGGAAACTTAACAAAGCTTCAAGAATTATATTTAGTAGCCAACTTTTTCACAGGGACAATACCTATGGAAATAGGCAATCTTCATGAACTTAAGATATTACAACTGGCACAGAACAATTTGAGCGGATCTATTCCATCAAAAATTTTTAACATGTCAGCTTTGAATATCTTGTCCATATCAAACAATTCTATATCTGGTAGACTTCCAGAAGATTTTGGATGTGGTCTTTCTAATCTAGACGAGATATATTTATGGGGCAACAAACTTTCTGGAAGAATCCCGAATACTATATCCAATGCTTCTAAGCTAACCAGAATAGAATTGCAGAAAAACAAATTCACGGGAGTTTTACCAAGCACACTTGGTCATTTAAGATACTTAAAAATCCTTGTAGTATATCACAACAATTTGACCACCGCAGATGCTTCCAATTCTAAGACTAAGACTAGCTTTCTTAGCTCATTGTCAAATTGTAGACAATTGGAAGTCTTGGATCTCTCAATAAATCCATTGTATATAAAACTTCCCAAATCCATTGGAAACTTGTCAAGTTCTTTACAAAGGTTGATCTTACATTATTCTGGTATTCATGGAAACATTCCATCAGAAATAGGGAATCTCACTAATTTGGTGGTAATATCTTTGGATGGAAATGTTTTGAATGGAACAATTCCAAAAACAATTGGTAGCTTACAAGCTCTTCAGTATTTGAGTATTGAATTCAATGAGCTAGTTGGTTTGATCATTGCTGAGCTTTGTCAAATCAAGCAACTTGCCTATTTGCAGCTAAGTGGAAATAAGTTTTTTGGAACAATGCCACATTGCTTAGGAGATCTTACCTCTTTACGATACCTTCATTTAGGCTCCAATAAGTTGAGTTCAATGATACCTTCACCTCTTTGGAATTTAAAAGATATATTGGAAGTCAACTTATCTTCTAATAATTTTGTTGGAAATCTTTCATACAAGATTGGGAATTTAAAAGCTCTCGTGTCATTGGATTTGTCAAGAAATCAAATTTCAGGCATCATTCCAACAACCATGGGTAATTTGCAAAATTTGAAAATTCTCTCCTTAGCTATTAATGAACTGCAAGGGCATATTCCTGAATCATTTGGGAATTTGCTAAGCTTAGAAAGTTTGAACCTCTCTCAAAATTATTTGTCTGGCGAGATCCCTAAATCTCTAGAATCACTTACATATCTTGAGTTTGTCAATCTTTCCTACAACAAACTACAAGGAGAAATTCCAAGTGGAGGAGTTTTCACAAATTTAACTGCTCAATCTCTCATGATGAATGAAGGTCTTTGTGGCCAACCACAATTAGAAGTTCCTCCATGCAAAAAAGGAAGAAAAAAGTCAATGGCAAGGTTGATTTTTTTGAAATGCATATTACCTGTGGTTGTGTCAACAATAATTGTTGTATTAGCCATTACCCTTTTACAACATAAACGACAAAACACAAGGGATGCAATTGAAAGGGATTTATCAACTTTTGGAGTACCAAGAAGGATTTCTTATTTTGAAATCTTGGAAGCAACCAATAGATTTGATGATTGCAACTTACTAGGAAAGGGCGGTTATGGTTCTGTGTACAAAGGAAGGCTGTCAAGTGGGATGATGGTCGCAATTAAAATCTTCAATTCTAATTTAGAACAAATGTTAAGGAGCTTTGAAGTAGAATGTGACATCATGCGTAATTTGCGCCATCGTAACTTAGTCAAGATCATTAGCAGTTGTTGTAATATTAATTTCAGGTCTTTGATTATGGAGTTCATGCCCAATGGGAGTCTTGAAAAATGGTTACATTCTCATACAAATTGTTTAGATTTTCTACAAAGATTGAATATTATGATAAATGTAGCGCATGCTTTGGAGTACCTCCATCATGGCTTGTCAACTCCAGTGGTTCATTGTGATTTAAAGCCAAGTAACATCTTATTGAATGATGATATGGTTGCACATGTAAGTGATTTTGGAATTTCCAAACTTTTAGCTGAAGGGCAATCTATGACATATACAAAGACAATACCTACAATTGGCTATATAGCGCCTGAATATGGATATGGAGGAATTGTTTCAACTAAAGTAGATGTGTATAGTTATGGAATTATATTATTAGAAGTCTTCACAAGAAAAAGGCCAACAGATGATATGTTTGCGCCAGGATTGAACTTGAAGAGTTGGGTAAGTGAGTTAATGTCACATGCAATAGTTCAACTCATGGATTCCAATCTAATAGAAGGAGATGAATGGCATATTGAAAACATTATGACATCTGCTTCCTCAATTTTTGAATTGGCCTTGAAGTGTTGCAATGATTCTCCAGAAACACGTAGCAATATGATAGATGTAGCAACATCTTTAAACAAGGTCAAGGTCAAGTATATGCAAAGGCAGAAAATCATACAAAAATAA 3273 0.3553 MANFCLQYFSFFLFSLLCLMACLTLSHTNFTMNDEMTLLAFKFSIKDPYNHLANWSNSSSICNWVGVTCDAHNRVRILNLAEMGLNGTLPSQLGNLSFLVELDLHRNNFYGQLPKELFQLQKLEILNLSNNTLSGEISWIPSLFTLQQLILHHNGFGGVIPTSVYNLSKLVTLDWSFNFIQGSIPLEIGKLQHLRILNIAMNKLSGRVIPEKISHLTKLEVVKLAANQLSGYIPENIGNLTMLQGIILDRNNLQGPMPTDWNRCKELKILSSSFTTLSGHIPSEIGNLTKLQELYLVANFFTGTIPMEIGNLHELKILQLAQNNLSGSIPSKIFNMSALNILSISNNSISGRLPEDFGCGLSNLDEIYLWGNKLSGRIPNTISNASKLTRIELQKNKFTGVLPSTLGHLRYLKILVVYHNNLTTADASNSKTKTSFLSSLSNCRQLEVLDLSINPLYIKLPKSIGNLSSSLQRLILHYSGIHGNIPSEIGNLTNLVVISLDGNVLNGTIPKTIGSLQALQYLSIEFNELVGLIIAELCQIKQLAYLQLSGNKFFGTMPHCLGDLTSLRYLHLGSNKLSSMIPSPLWNLKDILEVNLSSNNFVGNLSYKIGNLKALVSLDLSRNQISGIIPTTMGNLQNLKILSLAINELQGHIPESFGNLLSLESLNLSQNYLSGEIPKSLESLTYLEFVNLSYNKLQGEIPSGGVFTNLTAQSLMMNEGLCGQPQLEVPPCKKGRKKSMARLIFLKCILPVVVSTIIVVLAITLLQHKRQNTRDAIERDLSTFGVPRRISYFEILEATNRFDDCNLLGKGGYGSVYKGRLSSGMMVAIKIFNSNLEQMLRSFEVECDIMRNLRHRNLVKIISSCCNINFRSLIMEFMPNGSLEKWLHSHTNCLDFLQRLNIMINVAHALEYLHHGLSTPVVHCDLKPSNILLNDDMVAHVSDFGISKLLAEGQSMTYTKTIPTIGYIAPEYGYGGIVSTKVDVYSYGIILLEVFTRKRPTDDMFAPGLNLKSWVSELMSHAIVQLMDSNLIEGDEWHIENIMTSASSIFELALKCCNDSPETRSNMIDVATSLNKVKVKYMQRQKIIQK 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1825 1090 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 361 1071 - -
Prci6g1825 1090 SUPERFAMILY RNI-like 138 456 - -
Prci6g1825 1090 PRINTS Leucine-rich repeat signature 615 628 - -
Prci6g1825 1090 PRINTS Leucine-rich repeat signature 660 673 - -
Prci6g1825 1090 SUPERFAMILY L domain-like 469 726 - -
Prci6g1825 1090 Gene3D Phosphorylase Kinase; domain 1 785 877 - -
Prci6g1825 1090 FunFam Leucine-rich repeat receptor-like protein kinase 31 185 - -
Prci6g1825 1090 SUPERFAMILY Protein kinase-like (PK-like) 782 1074 IPR011009 -
Prci6g1825 1090 SMART LRR_typ_2 564 588 IPR003591 -
Prci6g1825 1090 SMART LRR_typ_2 361 385 IPR003591 -
Prci6g1825 1090 SMART LRR_typ_2 191 215 IPR003591 -
Prci6g1825 1090 SMART LRR_typ_2 492 516 IPR003591 -
Prci6g1825 1090 SMART LRR_typ_2 636 659 IPR003591 -
Prci6g1825 1090 SMART LRR_typ_2 216 240 IPR003591 -
Prci6g1825 1090 SMART LRR_typ_2 612 635 IPR003591 -
Prci6g1825 1090 SMART LRR_typ_2 312 336 IPR003591 -
Prci6g1825 1090 SMART LRR_typ_2 660 684 IPR003591 -
Prci6g1825 1090 SMART LRR_typ_2 96 120 IPR003591 -
Prci6g1825 1090 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 878 1087 - -
Prci6g1825 1090 CDD STKc_IRAK 808 1076 - -
Prci6g1825 1090 ProSiteProfiles Leucine-rich repeat profile. 662 685 IPR001611 GO:0005515
Prci6g1825 1090 SUPERFAMILY Outer arm dynein light chain 1 72 161 - -
Prci6g1825 1090 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 439 736 - -
Prci6g1825 1090 ProSitePatterns Serine/Threonine protein kinases active-site signature. 921 933 IPR008271 GO:0004672|GO:0006468
Prci6g1825 1090 ProSitePatterns Protein kinases ATP-binding region signature. 808 830 IPR017441 GO:0005524
Prci6g1825 1090 SMART LRR_sd22_2 361 387 - -
Prci6g1825 1090 SMART LRR_sd22_2 312 338 - -
Prci6g1825 1090 SMART LRR_sd22_2 443 469 - -
Prci6g1825 1090 SMART LRR_sd22_2 660 686 - -
Prci6g1825 1090 SMART LRR_sd22_2 564 585 - -
Prci6g1825 1090 SMART LRR_sd22_2 612 638 - -
Prci6g1825 1090 SMART LRR_sd22_2 167 188 - -
Prci6g1825 1090 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Prci6g1825 1090 Gene3D Ribonuclease Inhibitor 425 740 IPR032675 -
Prci6g1825 1090 Gene3D Ribonuclease Inhibitor 287 424 IPR032675 -
Prci6g1825 1090 Pfam Protein kinase domain 805 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1825 1090 Gene3D Transferase(Phosphotransferase) domain 1 878 1089 - -
Prci6g1825 1090 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 208 429 - -
Prci6g1825 1090 SMART serkin_6 802 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1825 1090 Gene3D Ribonuclease Inhibitor 184 284 IPR032675 -
Prci6g1825 1090 Gene3D Ribonuclease Inhibitor 31 183 IPR032675 -
Prci6g1825 1090 Pfam Leucine rich repeat 542 601 IPR001611 GO:0005515
Prci6g1825 1090 Pfam Leucine rich repeat 314 374 IPR001611 GO:0005515
Prci6g1825 1090 Pfam Leucine rich repeat 638 697 IPR001611 GO:0005515
Prci6g1825 1090 ProSiteProfiles Protein kinase domain profile. 802 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1825 Prci-Chr6 15938748 15945616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1825 589 703 Receptor kinase-like Gene Family AT3G47570 37.410 2.35e-13 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g1825 Pkinase 5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1825 - K13420 qsa:O6P43_031956 1089.72