Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1824 ATGGCAAACTTTTGTCTTCAGTATTTCTCCTTCTTCCTCTTTTCACTGCTTTGTCTCATGGCTTGTCTCACTTTATCTCACACCAATTTTACCATGAATGATGAAATGACACTTCTTGCTTTCAAGTTTTCCATCAAAGACCCTTACAATCACTTGGCTAATTGGTCCAACTCTTCTTCCATTTGTAATTGGGTTGGAGTTACATGTGATGCTCATAACAGAGTAAGAATCTTGAATCTTGCTGAGATGGGTCTCAATGGCACCTTACCCTCACAACTTGGGAATCTCTCCTTTTTAGTGGAACTTGACCTTCACAGAAACAACTTTTATGGTCAGTTACCAAAAGAGTTGTTTCAGTTACAGAAGTTGGAAATTCTCAACTTGAGTAATAACACATTAAGTGGAGAAATTTCTTGGATTCCAAGCTTGTTTACCCTTCAACAATTGATTCTTCATCATAATGGTTTTGGAGGTGTTATTCCCACAAGTGTATACAATTTATCAAAGTTAGTGACCCTGGATTGGAGTTTCAACTTTATCCAAGGATCTATTCCACTTGAGATTGGAAAACTTCAACACTTGAGGATTTTAAACATTGCAATGAACAAGCTTTCAGGAAGTATACCTCTAGCTATTTCTAACTTATCCTCACTTGAACAAATAGTTTTATCTCACAACTCTTTATCAGGAGTTATTCCCGAAAAAATTAGCCATCTCACAAAGCTGGAGGTTGTAAAGTTGGCTGCTAATCAACTATCTGGCTACATACCGGAGAATATTGGGAACTTAACTATGCTTCAAGGCATAATTCTTGACCGCAATAACCTACAAGGTCCCATGCCAACAGATTGGAATCGATGTAAGGAGCTCAAAATCTTGTCGTCATCTTTCACCACATTGAGTGGACACATACCAAGTGAGATCGGAAACTTAACAAAGCTTCAAGAATTATATTTAGTAGCCAACTTTTTCACAGGGACAATACCTATGGAAATAGGCAATCTTCATGAACTTAAGATATTACAACTGGCACAGAACAATTTGAGCGGATCTATTCCATCAAAAATTTTTAACATGTCAGCTTTGAATATCTTGTCCATATCAAACAATTCTATATCTGGTAGACTTCCAGAAGATTTTGGATGTGGTCTTTCTAATCTAGACGAGATATATTTATGGGGCAACAAACTTTCTGGAAGAATCCCGAATACTATATCCAATGCTTCTAAGCTAACCAGAATAGAATTGCAGAAAAACAAATTCACGGGAGTTTTACCAAGCACACTTGGTCATTTAAGATACTTAAAAATCCTTGTAGTATATCACAACAATTTGACCACCGCAGATGCTTCCAATTCTAAGACTAAGACTAGCTTTCTTAGCTCATTGTCAAATTGTAGACAATTGGAAGTCTTGGATCTCTCAATAAATCCATTGTATATAAAACTTCCCAAATCCATTGGAAACTTGTCAAGTTCTTTACAAAGGTTGATCTTACATTATTCTGGTATTCATGGAAACATTCCATCAGAAATAGGGAATCTCACTAATTTGGTGGTAATATCTTTGGATGGAAATGTTTTGAATGGAACAATTCCAAAAACAATTGGTAGCTTACAAGCTCTTCAGTATTTGAGTATTGAATTCAATGAGCTAGTTGGTTTGATCATTGCTGAGCTTTGTCAAATCAAGCAACTTGCCTATTTGCAGCTAAGTGGAAATAAGTTTTTTGGAACAATGCCACATTGCTTAGGAGATCTTACCTCTTTACGATACCTTCATTTAGGCTCCAATAAGTTGAGTTCAATGATACCTTCACCTCTTTGGAATTTAAAAGATATATTGGAAGTCAACTTATCTTCTAATAATTTTGTTGGAAATCTTTCATACAAGATTGGGAATTTAAAAGCTCTCGTGTCATTGGATTTGTCAAGAAATCAAATTTCAGGCATCATTCCAACAACCATGGGTAATTTGCAAAATTTGAAAATTCTCTCCTTAGCTATTAATGAACTGCAAGGGCATATTCCTGAATCATTTGGGAATTTGCTAAGCTTAGAAAGTTTGAACCTCTCTCAAAATTATTTGTCTGGCGAGATCCCTAAATCTCTAGAATCACTTACATATCTTGAGTTTGTCAATCTTTCCTACAACAAACTACAAGGAGAAATTCCAAGTGGAGGAGTTTTCACAAATTTAACTGCTCAATCTCTCATGATGAATGAAGGTCTTTGTGGCCAACCACAATTAGAAGTTCCTCCATGCAAAAAAGGAAGAAAAAAGTCAATGGCAAGGTTGATTTTTTTGAAATGCATATTACCTGTGGTTGTGTCAACAATAATTGTTGTATTAGCCATTACCCTTTTACAACATAAACGACAAAACACAAGGGATGCAATTGAAAGGGATTTATCAACTTTTGGAGTACCAAGAAGGATTTCTTATTTTGAAATCTTGGAAGCAACCAATAGATTTGATGATTGCAACTTACTAGGAAAGGGCGGTTATGGTTCTGTGTACAAAGGAAGGCTGTCAAGTGGGATGATGGTCGCAATTAAAATCTTCAATTCTAATTTAGAACAAATGTTAAGGAGCTTTGAAGTAGAATGTGACATCATGCGTAATTTGCGCCATCGTAACTTAGTCAAGATCATTAGCAGTTGTTGTAATATTAATTTCAGGTCTTTGATTATGGAGTTCATGCCCAATGGGAGTCTTGAAAAATGGTTACATTCTCATACAAATTGTTTAGATTTTCTACAAAGATTGAATATTATGATAAATGTAGCGCATGCTTTGGAGTACCTCCATCATGGCTTGTCAACTCCAGTGGTTCATTGTGATTTAAAGCCAAGTAACATCTTATTGAATGATGATATGGTTGCACATGTAAGTGATTTTGGAATTTCCAAACTTTTAGCTGAAGGGCAATCTATGACATATACAAAGACAATACCTACAATTGGCTATATAGCGCCTGAATATGGATATGGAGGAATTGTTTCAACTAAAGTAGATGTGTATAGTTATGGAATTATATTATTAGAAGTCTTCACAAGAAAAAGGCCAACAGATGATATGTTTGCGCCAGGATTGAACTTGAAGAGTTGGGTAAGTGAGTTAATGTCACATGCAATAGTTCAACTCATGGATTCCAATCTAATAGAAGGAGATGAATGGCATATTGAAAACATTATGACATCTGCTTCCTCAATTTTTGAATTGGCCTTGAAGTGTTGCAATGATTCTCCAGAAACACGTAGCAATATGATAGATGTAGCAACATCTTTAAACAAGGTCAAGGTCAAGTATATGCAAAGGCAGAAAATCATACAAAAATAA 3342 0.3546 MANFCLQYFSFFLFSLLCLMACLTLSHTNFTMNDEMTLLAFKFSIKDPYNHLANWSNSSSICNWVGVTCDAHNRVRILNLAEMGLNGTLPSQLGNLSFLVELDLHRNNFYGQLPKELFQLQKLEILNLSNNTLSGEISWIPSLFTLQQLILHHNGFGGVIPTSVYNLSKLVTLDWSFNFIQGSIPLEIGKLQHLRILNIAMNKLSGSIPLAISNLSSLEQIVLSHNSLSGVIPEKISHLTKLEVVKLAANQLSGYIPENIGNLTMLQGIILDRNNLQGPMPTDWNRCKELKILSSSFTTLSGHIPSEIGNLTKLQELYLVANFFTGTIPMEIGNLHELKILQLAQNNLSGSIPSKIFNMSALNILSISNNSISGRLPEDFGCGLSNLDEIYLWGNKLSGRIPNTISNASKLTRIELQKNKFTGVLPSTLGHLRYLKILVVYHNNLTTADASNSKTKTSFLSSLSNCRQLEVLDLSINPLYIKLPKSIGNLSSSLQRLILHYSGIHGNIPSEIGNLTNLVVISLDGNVLNGTIPKTIGSLQALQYLSIEFNELVGLIIAELCQIKQLAYLQLSGNKFFGTMPHCLGDLTSLRYLHLGSNKLSSMIPSPLWNLKDILEVNLSSNNFVGNLSYKIGNLKALVSLDLSRNQISGIIPTTMGNLQNLKILSLAINELQGHIPESFGNLLSLESLNLSQNYLSGEIPKSLESLTYLEFVNLSYNKLQGEIPSGGVFTNLTAQSLMMNEGLCGQPQLEVPPCKKGRKKSMARLIFLKCILPVVVSTIIVVLAITLLQHKRQNTRDAIERDLSTFGVPRRISYFEILEATNRFDDCNLLGKGGYGSVYKGRLSSGMMVAIKIFNSNLEQMLRSFEVECDIMRNLRHRNLVKIISSCCNINFRSLIMEFMPNGSLEKWLHSHTNCLDFLQRLNIMINVAHALEYLHHGLSTPVVHCDLKPSNILLNDDMVAHVSDFGISKLLAEGQSMTYTKTIPTIGYIAPEYGYGGIVSTKVDVYSYGIILLEVFTRKRPTDDMFAPGLNLKSWVSELMSHAIVQLMDSNLIEGDEWHIENIMTSASSIFELALKCCNDSPETRSNMIDVATSLNKVKVKYMQRQKIIQK 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1824 1113 Gene3D Ribonuclease Inhibitor 448 763 IPR032675 -
Prci6g1824 1113 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 462 759 - -
Prci6g1824 1113 ProSiteProfiles Leucine-rich repeat profile. 685 708 IPR001611 GO:0005515
Prci6g1824 1113 SMART LRR_sd22_2 215 241 - -
Prci6g1824 1113 SMART LRR_sd22_2 384 410 - -
Prci6g1824 1113 SMART LRR_sd22_2 466 492 - -
Prci6g1824 1113 SMART LRR_sd22_2 335 361 - -
Prci6g1824 1113 SMART LRR_sd22_2 683 709 - -
Prci6g1824 1113 SMART LRR_sd22_2 587 608 - -
Prci6g1824 1113 SMART LRR_sd22_2 635 661 - -
Prci6g1824 1113 SMART LRR_sd22_2 167 188 - -
Prci6g1824 1113 SUPERFAMILY Protein kinase-like (PK-like) 805 1097 IPR011009 -
Prci6g1824 1113 ProSitePatterns Protein kinases ATP-binding region signature. 831 853 IPR017441 GO:0005524
Prci6g1824 1113 SMART LRR_typ_2 587 611 IPR003591 -
Prci6g1824 1113 SMART LRR_typ_2 384 408 IPR003591 -
Prci6g1824 1113 SMART LRR_typ_2 215 238 IPR003591 -
Prci6g1824 1113 SMART LRR_typ_2 515 539 IPR003591 -
Prci6g1824 1113 SMART LRR_typ_2 659 682 IPR003591 -
Prci6g1824 1113 SMART LRR_typ_2 635 658 IPR003591 -
Prci6g1824 1113 SMART LRR_typ_2 239 263 IPR003591 -
Prci6g1824 1113 SMART LRR_typ_2 683 707 IPR003591 -
Prci6g1824 1113 SMART LRR_typ_2 335 359 IPR003591 -
Prci6g1824 1113 SMART LRR_typ_2 96 120 IPR003591 -
Prci6g1824 1113 Gene3D Ribonuclease Inhibitor 31 183 IPR032675 -
Prci6g1824 1113 SUPERFAMILY L domain-like 72 156 - -
Prci6g1824 1113 Pfam Protein kinase domain 828 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1824 1113 SUPERFAMILY RNI-like 140 504 - -
Prci6g1824 1113 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 236 453 - -
Prci6g1824 1113 FunFam Leucine-rich repeat receptor-like kinase 34 142 - -
Prci6g1824 1113 Gene3D Ribonuclease Inhibitor 282 380 IPR032675 -
Prci6g1824 1113 Gene3D Ribonuclease Inhibitor 184 281 IPR032675 -
Prci6g1824 1113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 944 956 IPR008271 GO:0004672|GO:0006468
Prci6g1824 1113 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 901 1110 - -
Prci6g1824 1113 Gene3D Phosphorylase Kinase; domain 1 808 900 - -
Prci6g1824 1113 Gene3D Transferase(Phosphotransferase) domain 1 901 1112 - -
Prci6g1824 1113 ProSiteProfiles Protein kinase domain profile. 825 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1824 1113 FunFam Leucine-rich repeat receptor protein kinase EMS1 143 234 - -
Prci6g1824 1113 SMART serkin_6 825 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1824 1113 Pfam Leucine rich repeat 661 720 IPR001611 GO:0005515
Prci6g1824 1113 Pfam Leucine rich repeat 565 624 IPR001611 GO:0005515
Prci6g1824 1113 Pfam Leucine rich repeat 193 252 IPR001611 GO:0005515
Prci6g1824 1113 Pfam Leucine rich repeat 337 397 IPR001611 GO:0005515
Prci6g1824 1113 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Prci6g1824 1113 CDD STKc_IRAK 831 1099 - -
Prci6g1824 1113 Gene3D Ribonuclease Inhibitor 381 447 IPR032675 -
Prci6g1824 1113 SUPERFAMILY L domain-like 492 749 - -
Prci6g1824 1113 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 347 1094 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1824 Prci-Chr6 15938748 15945616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1824 612 726 Receptor kinase-like Gene Family AT3G47570 37.410 2.55e-13 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g1824 Pkinase 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1824 - K13420 qsa:O6P43_031966 1137.87