Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1819 ATGGGTCTCTGCTCTGGCTCTCTTGCTCGCGGTCAGCTTGAGACTAGCTCCATAAATTCTCCCACTTTCGAATCAACCGCTACAAATATCACTGGAAGTGAGAACAAGTCCATTAATGCTTCTCCTAATCGGCATGTGGAGACTAATTATCACTTGAAGGTGTTTAGTTTAAGGGATTTAAAAGCAGCCACAAAGAACTTCAAACCAGACTTATTGCTTGGAGAGGGTACATTTGGTAAAGTTTACAAAGGTTGGTTGGATGAGAAAACATTTTCACCAACTGATAATGTTGGCAACAGAATCAAGGTTGCTGTCAAGACACTCAGATCCGAGAATCTGCAAGAGTACTTTCAAGAGTGGCAGTCAAAAGTGAAGTTTTTGGAGACCCTTTCTCATCCAAACATAGTCAAGCTATTAGGTTATTGTCTGGAAGATAGGGTGATTCTTCTTGTCTACGAGTTCGTGCCTAAGGGAAACTTGGAAAATCATCTTTTTAGAAGGATTCCTAGTAATGAACTATTATATTGGAATACACGGGTCAAGATAGCTATTGATGTTGCAGAGGGCTTGGCTTACTTGCACGCCTCAGAAAATCAAATCATTTTAAAAAACTTTGATACCTCAAATATTCTACTTGATGAGAGTTACAGTGCAAAAATTTGTGACTTTGGCTTGGCCAAATTTGGGCATATAGGAGAGGAATCGCATTTGAATAATGCCGCGATCCATGTGTCAAGTCATGCTGCGCCAGAATATATTCATTCTGGGCGCTTGAATGTGAAGAGCAATGTGTACGGATATGGTGTAGTGCTTCTTGAAATGCTGTCAGGTTTGAGAGCACATGATCTGAAGCGGCCAGATAGGCAGAGAAATTTGGTTAAGTGGGCTAAGCCATGTCTCTCTCATAAAAGAAAATTAAAAACGATAATTGATTTCAGGATTGAAGGTCAATACTCACTCGATGCGGCATTCCAAATAGCTCAGCTCATTCTCCAATGCTTGGAAGATTATCCCACACTTCGTCCTTCTATGAACCATGTGGTGGAGGCGTTGCATGGTGTTGAAGCTATCTCATAA 1077 0.4095 MGLCSGSLARGQLETSSINSPTFESTATNITGSENKSINASPNRHVETNYHLKVFSLRDLKAATKNFKPDLLLGEGTFGKVYKGWLDEKTFSPTDNVGNRIKVAVKTLRSENLQEYFQEWQSKVKFLETLSHPNIVKLLGYCLEDRVILLVYEFVPKGNLENHLFRRIPSNELLYWNTRVKIAIDVAEGLAYLHASENQIILKNFDTSNILLDESYSAKICDFGLAKFGHIGEESHLNNAAIHVSSHAAPEYIHSGRLNVKSNVYGYGVVLLEMLSGLRAHDLKRPDRQRNLVKWAKPCLSHKRKLKTIIDFRIEGQYSLDAAFQIAQLILQCLEDYPTLRPSMNHVVEALHGVEAIS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1819 358 SUPERFAMILY Protein kinase-like (PK-like) 44 351 IPR011009 -
Prci6g1819 358 ProSiteProfiles Protein kinase domain profile. 67 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1819 358 Pfam Protein tyrosine and serine/threonine kinase 73 351 IPR001245 GO:0004672|GO:0006468
Prci6g1819 358 MobiDBLite consensus disorder prediction 18 42 - -
Prci6g1819 358 Gene3D Transferase(Phosphotransferase) domain 1 155 357 - -
Prci6g1819 358 Gene3D Phosphorylase Kinase; domain 1 37 154 - -
Prci6g1819 358 PANTHER OS01G0588500 PROTEIN-RELATED 44 353 - -
Prci6g1819 358 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 155 357 - -
Prci6g1819 358 ProSitePatterns Protein kinases ATP-binding region signature. 73 106 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1819 Prci-Chr6 15759184 15763373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1819 39 351 Glycoside Hydrolase AT3G07070 40.127 1.90e-73 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci6g1819 PK_Tyr_Ser-Thr 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1819 - - pcin:129313940 720.309