Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1790 ATGGATGCATCATCCAGTACGTGTGAGATTGTGGAATCAAGAGAAGAGATAATTTCTGAGTTCCGAATGGATGAAAAACCTGAAAGTAGTTGTGCCCACAGATCAGGGAAAAAGTGTTCTATAGAGGATGATATTGATCGTCTTTTCCAAGCTATTGACTTTAAAAATTCAGCTAGAGGTTCTAGCACCCCACGTTCACAAAAGAGTGCTCTTAAAAGGCCAATAAAAGTCAGTTCATCTCAGGCATCAGGGATTGGGATTGCAGAGCCTGTAAGTTTGAAGCAGGCACTCAGAGGGCTTTGCATATCTCAGGCATCAGAGATGGCTGCATTGAAGCGACTATCAAAGCCATCCAGTTCATCTAGAGTATCTGAGGCGGGAACTATTAAGAAGCTGTATACAGAAGTAGTGGATGAGGGGAAAGGGAACTTGGTTGAAATCTCCCTTGTGCCTGAGATATCTGTATCTTCTGGTAAAATGCCTAGGGAAGAGAAGTCAAGTTCAAGTGCTGATCATTCTACTCATTTTGTTGAAGTAACAAATCCAAAAACAATCGCAACCAGGGTAGCATCCCGAGATCAGATTGTTCCTCTTCAAGCAGAAGGTGAAAATGAGAAGTTAGTCACAGTTTGTGGAAAACCTGTACTTCCAAATTCATCCATAGTTGATTTTGAAAGTGAGGAAGTGTCTGAGGTCAAGATTGTTTCTACTTCCTCAAGCAAAGCCTCGCACTGTTCTACAATTCTAGATAAGGGGCAGGAAGTAGAGTTGCATTCTGAAGCTAATCAACCAAGCTCTAGCACGAGCAGTGGAGTGGAGAAATCCACAAGCAGTATTACATGTTTGGCAAAGCCAATGTTCAGGAACATGAGCTTCCTTAAGAAAGTAAAGCAAGAATCATGTTCTACCTCAAGTGGCTCCACACTATGTTCAAGAAAAGTTGACAATGACTTGGATCCTGGTACGGGTAATTTGAACAAGGAGACTGATAAACATAATTTGAAGCAGGAAACGAAAGAAAATGAGAAATTGTCTCCCTGCAGTTCAAATCATAGTGTAGAAGTTAACTCAATTAATGTGTGTGCAGATTCAAGCAAAACTGGTTTCAGTATGAATTGCAGTAAGAGAACCAAATTTCTAGTGACAAAAATTGATGAAAAATCAAGATCAAAAGAAAAGGGTGAATTTTCCCAAAGCTCAAAAAGCAGCATTGGTGAGTATAGTAGTAGCACAACGGCAAGCTTAAGTGAAGAGAGCAATTTGAGTGGCTCTAGTCGCAGTGGCCACAGGCCTCACATGTCAAAACACTTGAGATGGGAAGCTGTTCGTGCTGTTCTGCAGCAGCATGGGAGCTTAAATTTGAAACATTTCAAGCTGCTCAGGAGGCTTGGTTGTGGGGATATTGGAACTGTTTATCTCGCAGAACTAATTGGTACAAGCTGCCTTTTTGCTCTGAAAGTGATGGATAATGAGTTTTTGGCCAACCGGAAGAAAATTTTCAGGGCCCAAACTGAGAGAGAGATCCTGCAGATGCTGGATCATCCTTTTCTTCCTACACTTTATGCCTATATTACAACTGATAAGCTCTCTTGCTTGGTTATGGAGTATTGCCCAGGTGGAGATCTACATGTGCTGCGCCAGAGGCAACCATATAGGAGTTTCTCAGAACAAGCAACCAGGTTTTATGTTGCTGAAGTTCTTCTTGCCCTGGAGTATCTGCACATGCTAGGAGTCATATATCGAGACTTGAAGCCTGAAAATATCCTTGTCCGAGAAGATGGTCACATTATGCTTACAGATTTTGACTTGTCACTCAGATGTTCTGTGAATCCAACGTTAGTCAAGTCGTCTTCGCCGGATGAGGATTCAACAAAGAAGATGTCCAGTCCCTGTGCAGAGGCTAGCTGCATACACCCTTTCTGTCTACAACCTGACTGGCAAGTCTCGTGTTTCACTCCTATTCTCTTATCTGCTGGAGCAAAATCTCGGAAGATGAAGTCCGACATGGCTGCTCAGGTTGGTCCCTTGCCACAACTCGTTGTCGAGCCAACCAGTGCCCGCTCTAACTCATTTGTTGGCACGTACGAATACCTCGCGCCGGAGATCATCAAAGGTGATGGCCATGGAAGTGCTGTGGATTGGTGGACTTTCGGTATATTTTTGTTTGAGCTTTTGTATGGTAAGACTCCCTTCAAGGGAGCAGGGAATGAGGAAACATTATCCAATGTTGTGTCACAGAGTCTTAAGTTCCCAGATGCTCCTATTGTCAGTTTTCATGCAAGAGATCTGATACGAGGGCTGTTGATAAAAGATCCAGAAAACCGGTTAGGTTCGGTTAAAGGCGCCGCCGAGATAAAGCAACACCCTTTCTTTGAAGGCTTAAACTGGGCTCTGATAAGATGTGCAGCCCCACCTGAGCTGCCCAGGTTTCGTGAATTTGGAAGCTGTGTCCCATCATCAATGGCTTCACAGAAAGAGAATGCGAATGATTTAGAGGATACAGAAGATTGTGAGGAGTTTGAGCTGTTTTAG 2532 0.4329 MDASSSTCEIVESREEIISEFRMDEKPESSCAHRSGKKCSIEDDIDRLFQAIDFKNSARGSSTPRSQKSALKRPIKVSSSQASGIGIAEPVSLKQALRGLCISQASEMAALKRLSKPSSSSRVSEAGTIKKLYTEVVDEGKGNLVEISLVPEISVSSGKMPREEKSSSSADHSTHFVEVTNPKTIATRVASRDQIVPLQAEGENEKLVTVCGKPVLPNSSIVDFESEEVSEVKIVSTSSSKASHCSTILDKGQEVELHSEANQPSSSTSSGVEKSTSSITCLAKPMFRNMSFLKXKVKQESCSTSSGSTLCSRKVDNDLDPGTGNLNKETDKHNLKQETKENEKLSPCSSNHSVEVNSINVCADSSKTGFSMNCSKRTKFLVTKIDEKSRSKEKGEFSQSSKSSIGEYSSSTTASLSEESNLSGSSRSGHRPHMSKHLRWEAVRAVLQQHGSLNLKHFKLLRRLGCGDIGTVYLAELIGTSCLFALKVMDNEFLANRKKIFRAQTEREILQMLDHPFLPTLYAYITTDKLSCLVMEYCPGGDLHVLRQRQPYRSFSEQATRFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVNPTLVKSSSPDEDSTKKMSSPCAEASCIHPFCLQPDWQVSCFTPILLSAGAKSRKMKSDMAAQVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGDGHGSAVDWWTFGIFLFELLYGKTPFKGAGNEETLSNVVSQSLKFPDAPIVSFHARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPRFREFGSCVPSSMASQKENANDLEDTEDCEEFELF 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1790 844 Gene3D Phosphorylase Kinase; domain 1 456 537 - -
Prci6g1790 844 Gene3D Transferase(Phosphotransferase) domain 1 686 809 - -
Prci6g1790 844 SUPERFAMILY Protein kinase-like (PK-like) 431 812 IPR011009 -
Prci6g1790 844 MobiDBLite consensus disorder prediction 313 351 - -
Prci6g1790 844 MobiDBLite consensus disorder prediction 56 75 - -
Prci6g1790 844 SMART serkin_6 458 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1790 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 579 591 IPR008271 GO:0004672|GO:0006468
Prci6g1790 844 CDD STKc_phototropin_like 456 810 - -
Prci6g1790 844 MobiDBLite consensus disorder prediction 249 273 - -
Prci6g1790 844 PANTHER FLIPPASE KINASE 1-RELATED 274 811 - -
Prci6g1790 844 Gene3D Transferase(Phosphotransferase) domain 1 538 607 - -
Prci6g1790 844 FunFam serine/threonine-protein kinase D6PK-like 687 810 - -
Prci6g1790 844 MobiDBLite consensus disorder prediction 325 345 - -
Prci6g1790 844 ProSiteProfiles Protein kinase domain profile. 458 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1790 844 FunFam serine/threonine-protein kinase D6PK-like 542 609 - -
Prci6g1790 844 MobiDBLite consensus disorder prediction 258 273 - -
Prci6g1790 844 Pfam Protein kinase domain 459 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1790 844 Pfam Protein kinase domain 689 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1790 844 FunFam Serine/threonine-protein kinase D6PK-like 456 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1790 Prci-Chr6 15555778 15561123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1790 381 844 AGC Kinase Gene Family AT3G52890 67.158 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Prci6g1790 Pkinase 5.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1790 - - gmx:100789339 1233.78