Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1771 ATGAGGCCCTTTCCTTCTCCATCTTCTTCTTCCTCTATCCATCTCTTTATCTCCATTTTCATGATTCTTATAATTTCTTCAATAATCTCAATCACATCTTCTGAGAAACCCTACCAAGATGCCAACAACACACAGTTCATCAGAACATCTTGTAATTCAACAAACTACCCAAGACTCTGCTTTGCTTCCTTATCAAAGCACGCCGGCTTCATACAAACCAGCCCCGTGCTTCTCACCGGCACGGCGCTAAACGTGACTCTGGCGTCGGCGAAGGCGACGTCGGCGATGATGTCGACACTATCCAAGAGCCTCCACGGTAGGCTGAAGCCGAGGGAGGCGGCGGCATTGAGGGACTGTGTGGAGCAGCTGAGTGACTCAGTAGATGAACTGAGAAAGTCCATTGGAGAGATGAGTGAGCTAAGAGAATCAAACTTTGAGCTGACAATGAATGATGTTCAGACATGGGTTAGTGCTGCTTTGACTGATGAGAGCACTTGCAGTGATGGGTTTGAAGGAGCTTCCATGAATGGAAATGTGAAGAACACTGTGAGAAGCAGGATTGTGCTTGTGGCTCAGCTTACTAGTAATGCTTTGGCTTTCATAAGTCAGCTTGCTTCTTCCCACGCCTGA 630 0.473 MRPFPSPSSSSSIHLFISIFMILIISSIISITSSEKPYQDANNTQFIRTSCNSTNYPRLCFASLSKHAGFIQTSPVLLTGTALNVTLASAKATSAMMSTLSKSLHGRLKPREAAALRDCVEQLSDSVDELRKSIGEMSELRESNFELTMNDVQTWVSAALTDESTCSDGFEGASMNGNVKNTVRSRIVLVAQLTSNALAFISQLASSHA 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1771 209 FunFam Pectin methylesterase inhibitor 1 42 204 - -
Prci6g1771 209 CDD PMEI-like_3 49 206 - -
Prci6g1771 209 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 204 IPR035513 -
Prci6g1771 209 SMART PMEI_2 42 200 IPR006501 GO:0004857
Prci6g1771 209 NCBIfam pectinesterase inhibitor domain 17 204 IPR006501 GO:0004857
Prci6g1771 209 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 206 IPR035513 -
Prci6g1771 209 Coils Coil 120 140 - -
Prci6g1771 209 Pfam Plant invertase/pectin methylesterase inhibitor 46 199 IPR006501 GO:0004857
Prci6g1771 209 PANTHER PECTINESTERASE INHIBITOR-LIKE 20 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1771 Prci-Chr6 15239367 15240257 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1771 47 204 Carbohydrate Esterase AT3G14310 30.488 2.82e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1771 - - gmx:100305537 234.958