Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1770 ATGTCATCAACCATTGTTAAAATTTTCTTTCCACTTGCCTTATTTTCTTCACTTTTCTCAATATCTTCTTCTTCTTCATCTATAGACTTTTGGTGCAACCAAACTCCATATCCTGAGCCATGCAAATACCACATGATGAGCCACAGCCACCACAAATTTGAACCAAGACATCGATCCGAGTTTAGGAAAATGCTGGTTCAATCAGCCATGGAACAAGCTCAAGTCATGCGCGAGCGAGCACAAAATTATGGCCCAAATTTTGTAACCACAACACAGAGATTTGTGTTCAATGATTGTTTAAAGCTCAACGACAACACCATCTTCCATCTAAACCAAACCCTTCTAGCCCTGCACACTAGTAATTCTTGCTCATCCTTATTAGATGCACAAACATGGCTCAGTACTGCACTTACAAACATCGAAACCTGCCGGAGCAGCACGTTGCAGCTAAGAGTCAGAGAGTTCACAGCTCAAAACAATGTGAGTGACAATGTTAGGAGGATGATAAGCAATGTGTTAGCAGTTAATAATGGTGATATTGTGATGATGAAGCAACAGAATAATAACACAGAGAAGAAAACATGTGGGTTTCCAAGTTGGTTTTCTAGGTGTAACAGAAGGTTATTGATAAGCTTGAAGCCATCATCTTTGAAGGCTAATATTGTGGTGGCTCAAGATGGTACGGGCCATTTTAAGACAGTTCAAGCCGCCATTGATGAAGCATCAAGGAGAACAGTGAAGACGAGGTTTGTGATACGTGTGAAGAGAGGGATTTATGAAGAGAATATTGAAGTTGATAAGGATAATGAAAATCTCATGATTGTTGGAGATGGAATGAATGTTACCATTATAACTAATAATAGAAGCGTTAAAGATGGTATTACCCCTTCTATGTCTGCAACAGCAGGAATAGATGGTGCGCATTTCATTGCACAAGATATTACTTTTAGAAACACTGCTGGTCCTGAGAAAGGCCAAGCCGTGGCACTCCGATCAGCCTCCGATCTCTCAGTCTTCTACAGGTGCTCCATCGAAGGCTATCAAGACACACTAATGGCTCATGCACAGCGCCAATTCTACAGAGACTGTCGAATTTTCGGCACTGTGGATTTCATTTGGGGCAATGCTGCAGCTGTTTTTCAAAACTGCATCATTCTCGTCAGAAGGCCACTTCAAGGGCAAGCAAACATGATTACGGCTCAAGGACGAGGCGACCCGTTTCAAAACACCGGAATATCAATCATCAATTCTCAGATTCGAGCCGCACCGGATCTCAGACCGGTTGTAGACTCGTATCAAACCTATTTGGGTAGGCCATGGCAGCAATATGCTAGAGTGGTGGTGATGAAAAGTTACATTGAAGGTTTGGTGAATCCATTGGGTTGGTCTCCGTGGGGAGATAGTGATTTTGGTCAAGACACGTGTTATTTTGGGGAATATATGAACAATGGGGCTGGTTCATCAACACAAAGTAGGGTTCAATGGCCTGGGTTTCATGTGATGACAAGCCAAAATGAGGCACAACAATTTACTGTTGCTGGACTTCTTGCTGGTAACATATGGTTGCCTCAAGCTGGTGTGCCTTTTGATATTGGTATTTAA 1602 0.4232 MSSTIVKIFFPLALFSSLFSISSSSSSIDFWCNQTPYPEPCKYHMMSHSHHKFEPRHRSEFRKMLVQSAMEQAQVMRERAQNYGPNFVTTTQRFVFNDCLKLNDNTIFHLNQTLLALHTSNSCSSLLDAQTWLSTALTNIETCRSSTLQLRVREFTAQNNVSDNVRRMISNVLAVNNGDIVMMKQQNNNTEKKTCGFPSWFSRCNRRLLISLKPSSLKANIVVAQDGTGHFKTVQAAIDEASRRTVKTRFVIRVKRGIYEENIEVDKDNENLMIVGDGMNVTIITNNRSVKDGITPSMSATAGIDGAHFIAQDITFRNTAGPEKGQAVALRSASDLSVFYRCSIEGYQDTLMAHAQRQFYRDCRIFGTVDFIWGNAAAVFQNCIILVRRPLQGQANMITAQGRGDPFQNTGISIINSQIRAAPDLRPVVDSYQTYLGRPWQQYARVVVMKSYIEGLVNPLGWSPWGDSDFGQDTCYFGEYMNNGAGSSTQSRVQWPGFHVMTSQNEAQQFTVAGLLAGNIWLPQAGVPFDIGI 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1770 533 SMART PMEI_2 23 175 IPR006501 GO:0004857
Prci6g1770 533 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 178 IPR035513 -
Prci6g1770 533 CDD PMEI-like_3 31 177 - -
Prci6g1770 533 Pfam Pectinesterase 220 519 IPR000070 GO:0030599|GO:0042545
Prci6g1770 533 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 177 IPR035513 -
Prci6g1770 533 Pfam Plant invertase/pectin methylesterase inhibitor 27 174 IPR006501 GO:0004857
Prci6g1770 533 Gene3D - 214 533 IPR012334 -
Prci6g1770 533 PANTHER PECTINESTERASE 18 523 - -
Prci6g1770 533 SUPERFAMILY Pectin lyase-like 217 532 IPR011050 -
Prci6g1770 533 FunFam Pectinesterase 214 533 - -
Prci6g1770 533 NCBIfam pectinesterase inhibitor domain 6 177 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1770 Prci-Chr6 15138860 15141949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1770 31 533 Carbohydrate Esterase AT5G51490 55.206 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1770 K01051 - gmx:100807908 651.744