Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1766 ATGATGAGGTCTAGAGTCTTCTTCTCTCTTGCCGTTTTGCTGATCTGTGCCTTGGAGGTCATGTTTGATTTTGAACATTCATGCGCATTCACAAACATGGCCCAACATAAAATCTTTCCCTTATTTCTAATTCCTCTTATTACTTGCATAGTTTTTTGGTCACTATGCCCTATCGCTTCAGCAGCACTTACAGAATCTGAAGCTCTTCTCAAATGGAAACAAAGTCTTCCAAATTACCAACCAATTTTGGATTCATGGGTCACTCCATCGCAAGCTAACTCCAGTGAAGCTCAAGCCCTATGTTCATGGCGTGGAATCAATTGTGACTCTTCAGGTAGCATCGTTGAACTAAACTTGAACAGTACTGGTCTTGAAGGTACCATCGGAAACTTGAACTTTTCGGCATTACCAAATCTTCTCGTTCTCAATCTTCAATATAATAAACTCAGTGGAAGTATACCACAAAGCATTGGAATGCTCTCCAGGCTCCAATACCTATCTCTAGAAGGAAACAACTTTTCTGGGTCTATACCACAATCTCTTGGTCACTGTACAAATCTAAGTGTTCTCTCAATGGCTTTAAACAATCTCTCAGGCATAATTCCGCCTAGTTTTGGTAGATTGACCAATCTAACTGATGTTCGCTTTCACCGTAACAATTTACACGGTGATTTGCCACAAGAGTTTGGAAATGTATCATCTTTGATTGTTGTTCATCTATCTTATAACAATTTCACTGGCCATTTACCGCCTCAAGTGTGCAAAGGTGGGAAGCTTGTCAATTTCACTGCAGCCTATAATGGTCTCTCTGGTTCAATTCCACCAAGTTTGAGAAACTGTTCATCATTATACAGAGTTCAACTTCAAAATAATCGGTTGACAGGTTATGCAGATCAGGATTTTGGTGCTCATCCTAATCTCACTTATGTTGACATCAGCTTCAACAGAGTGCAGGGTAATCTCTCTGCAAATTGGGGTGCCTGCCCAAGCTTAGAAGCTCTGATCATGGCTGGAAATTCAATTGGTGGAAATATTCCTGCTGAGATATTTCAGTTGAAAAAGTTGCAAAAGCTTGACCTATCATCAAACCAAATAACTGGTGAGATTCCACCACAAATCAGAAATGCCTCCATGTTATACCTTCTGAAGTTAAACAGAAACAATATTTCAGGTTTGATGCCTACAAGCTTTGGAAGTCTATCTAATTTAGAGTCATTAGACCTGTCAATGAACAGGCTAAGCGGATCCATTCCTTATCAAATAGGGAATTGCTACAAGCTTGTCAATTTAAATTTGAGTCATAATGACTTCAATGGCACTATCCCATATCAAATTGGGAATCTTGACTCCTTGGAAGATTTCTTGGACTTGAGTTTTAATTCACTTTCTGGAGAAATCCCTGTGGACCTTATTAAGCTTGACAACTTGATAAGTCTGAATCTGTCTCATAACAATCTATCAGGTTCTATCCCTGATTCCCTCAGTACAATGTTGAGCTTGTCAAGCATCAACCTCTCTTACAACCATTTGGAGGGTCCTGCCCCAAATAGTGGCATATTTAATTCTTCTTATCCATTAGATTTGAGTAATAACAAAGATTTATGTGGGAGAATCCAAGGTTTGAGACCTTGCAATGTTTCAATATCACACATGGGAAGCACCAAAGAGAAAGTTGTGATATCTATTCTTGCTTCTTTAGCAGGTGCACTACTTGTTACATTGGTGTTAGTTGGGATTTTTTTTATTTGTTCAAAGGAAAACTCAGGAGTTTTAGAACAGAATTCAGGAACCAAGAAAGAAAGTCCATTTTCAGTCTGTCAATTTGATGGGAAAGATCTGTATAAAGACATTGTTGAAGCAACAGAGAACTTTGATGGCAAGTATTGTGTTGGGGAAGGATCTTCTGGAAAAGTTTACAAAATGGTCATGCAAGGAGGTGAACAATTTGCTGTAAAGAAGTTTAGATGTGAAGAAGATGAAATGGACATGGAAAGTTTAAAATCCTTCAAGAGTGAAATCAAAGCCTTGACAGAAATCCGCCATCGAAACATTGTGAAGCTCTATGGATTTTGCTCACAAGGATCACACACTTTTGCTGTTTATGAGTACATGGAAGGAGGGACTTTAGCTGATTTTCTGAAAAATGACACAAAGGCATTAGAGTTAGATTGGCCTAAAAGGGTGGATGTTGTCAAAGGTGTAGCACAAGCTTTATCTTATATGCATCATGATTGTGATCCACCAATTATTCATAGAGACATATCAAGCAATAATATATTATTGTCCGCAAATCTTGAAGCCCATGTCTCAGACTTTGGCACAGCAAGATTCCTGAAGGCTAGCTCATCATCAATTTGGACAACATTTGCTGGCACACGTGGGTATGCTGCTCCAGAGCTAGCATATACAATGGCAGTATCTGAGAAATGTGATGTGTTTAGCTTTGGTGTATTGGCTTTTGAGATTATCATGGGAAAGCATCCTGGTGATTTAATTTCCCACATACAATCCGTTGATGCTCAAAGCATAAACTTCAATGAGATTCTAGATCCTCGTCTGTCACCTCCTACAAAGCAGAAAAGGCTGAAGGAAGTGACTTTGATTGCAGATCTTGCTCTTTCATGTTTACAGACAAACCCTTCATCTCGACCAACCATGCAAAGCATCGCTCAGATGATTTAA 2682 0.3904 MMRSRVFFSLAVLLICALEVMFDFEHSCAFTNMAQHKIFPLFLIPLITCIVFWSLCPIASAALTESEALLKWKQSLPNYQPILDSWVTPSQANSSEAQALCSWRGINCDSSGSIVELNLNSTGLEGTIGNLNFSALPNLLVLNLQYNKLSGSIPQSIGMLSRLQYLSLEGNNFSGSIPQSLGHCTNLSVLSMALNNLSGIIPPSFGRLTNLTDVRFHRNNLHGDLPQEFGNVSSLIVVHLSYNNFTGHLPPQVCKGGKLVNFTAAYNGLSGSIPPSLRNCSSLYRVQLQNNRLTGYADQDFGAHPNLTYVDISFNRVQGNLSANWGACPSLEALIMAGNSIGGNIPAEIFQLKKLQKLDLSSNQITGEIPPQIRNASMLYLLKLNRNNISGLMPTSFGSLSNLESLDLSMNRLSGSIPYQIGNCYKLVNLNLSHNDFNGTIPYQIGNLDSLEDFLDLSFNSLSGEIPVDLIKLDNLISLNLSHNNLSGSIPDSLSTMLSLSSINLSYNHLEGPAPNSGIFNSSYPLDLSNNKDLCGRIQGLRPCNVSISHMGSTKEKVVISILASLAGALLVTLVLVGIFFICSKENSGVLEQNSGTKKESPFSVCQFDGKDLYKDIVEATENFDGKYCVGEGSSGKVYKMVMQGGEQFAVKKFRCEEDEMDMESLKSFKSEIKALTEIRHRNIVKLYGFCSQGSHTFAVYEYMEGGTLADFLKNDTKALELDWPKRVDVVKGVAQALSYMHHDCDPPIIHRDISSNNILLSANLEAHVSDFGTARFLKASSSSIWTTFAGTRGYAAPELAYTMAVSEKCDVFSFGVLAFEIIMGKHPGDLISHIQSVDAQSINFNEILDPRLSPPTKQKRLKEVTLIADLALSCLQTNPSSRPTMQSIAQMI 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1766 893 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 233 548 - -
Prci6g1766 893 FunFam Leucine-rich repeat receptor protein kinase MSP1 587 703 - -
Prci6g1766 893 SUPERFAMILY Protein kinase-like (PK-like) 607 892 IPR011009 -
Prci6g1766 893 Pfam Protein kinase domain 630 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1766 893 Pfam Leucine rich repeat 379 437 IPR001611 GO:0005515
Prci6g1766 893 Pfam Leucine rich repeat 116 173 IPR001611 GO:0005515
Prci6g1766 893 Pfam Leucine Rich Repeat 475 495 IPR001611 GO:0005515
Prci6g1766 893 Pfam Leucine Rich Repeat 354 373 IPR001611 GO:0005515
Prci6g1766 893 ProSiteProfiles Leucine-rich repeat profile. 475 497 IPR001611 GO:0005515
Prci6g1766 893 Pfam Leucine rich repeat N-terminal domain 64 109 IPR013210 -
Prci6g1766 893 Gene3D Phosphorylase Kinase; domain 1 587 703 - -
Prci6g1766 893 SUPERFAMILY RNI-like 195 534 - -
Prci6g1766 893 PRINTS Leucine-rich repeat signature 355 368 - -
Prci6g1766 893 PRINTS Leucine-rich repeat signature 400 413 - -
Prci6g1766 893 ProSitePatterns Tyrosine protein kinases specific active-site signature. 749 761 IPR008266 GO:0004672|GO:0006468
Prci6g1766 893 ProSitePatterns Protein kinases ATP-binding region signature. 630 653 IPR017441 GO:0005524
Prci6g1766 893 FunFam Nuclear pore complex protein NUP107 62 226 - -
Prci6g1766 893 Gene3D Transferase(Phosphotransferase) domain 1 704 893 - -
Prci6g1766 893 PANTHER LEUCINE RICH REPEAT KINASE 2 181 892 - -
Prci6g1766 893 Gene3D Ribonuclease Inhibitor 62 228 IPR032675 -
Prci6g1766 893 FunFam MDIS1-interacting receptor like kinase 2 704 893 - -
Prci6g1766 893 SUPERFAMILY L domain-like 113 225 - -
Prci6g1766 893 ProSiteProfiles Leucine-rich repeat profile. 354 376 IPR001611 GO:0005515
Prci6g1766 893 SMART LRR_typ_2 473 497 IPR003591 -
Prci6g1766 893 SMART LRR_typ_2 352 376 IPR003591 -
Prci6g1766 893 SMART LRR_typ_2 232 256 IPR003591 -
Prci6g1766 893 SMART LRR_typ_2 160 184 IPR003591 -
Prci6g1766 893 SMART LRR_typ_2 400 424 IPR003591 -
Prci6g1766 893 SMART LRR_typ_2 377 399 IPR003591 -
Prci6g1766 893 SMART LRR_typ_2 136 159 IPR003591 -
Prci6g1766 893 SMART LRR_typ_2 208 231 IPR003591 -
Prci6g1766 893 Gene3D Ribonuclease Inhibitor 235 547 IPR032675 -
Prci6g1766 893 ProSiteProfiles Protein kinase domain profile. 624 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1766 Prci-Chr6 15008397 15011767 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1766 116 798 Receptor kinase-like Gene Family AT4G08850 44.242 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci6g1766 Pkinase 1.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1766 - - gmx:100814345 1001.89