Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1765 ATGATGAGGTCTAGAGTCTTCTTCTCTCTTGCCGTTTTGCTGATCTGTGCCTTGGAGGTCATGTTTGATTTTGAACATTCATGCGCATTCACAAACATGGCCCAACATAAAATCTTTCCCTTATTTCTAATTCCTCTTATTACTTGCATAGTTTTTTGGTCACTATGCCCTATCGCTTCAGCAGCACTTACAGAATCTGAAGCTCTTCTCAAATGGAAACAAAGTCTTCCAAATTACCAACCAATTTTGGATTCATGGGTCACTCCATCGCAAGCTAACTCCAGTGAAGCTCAAGCCCTATGTTCATGGCGTGGAATCAATTGTGACTCTTCAGGTAGCATCGTTGAACTAAACTTGAACAGTACTGGTCTTGAAGGTACCATCGGAAACTTGAACTTTTCGGCATTACCAAATCTTCTCGTTCTCAATCTTCAATATAATAAACTCAGTGGAAGTATACCACAAAGCATTGGAATGCTCTCCAGGCTCCAATACCTATCTCTAGAAGGAAACAACTTTTCTGGGTCTATACCACAATCTCTTGGTCACTGTACAAATCTAAGTGTTCTCTCAATGGCTTTAAACAATCTCTCAGGCATAATTCCGCCTAGTTTTGGTAGATTGACCAATCTAACTGATGTTCGCTTTCACCGTAACAATTTACACGGTGATTTGCCACAAGAGTTTGGAAATGTATCATCTTTGATTGTTGTTCATCTATCTTATAACAATTTCACTGGCCATTTACCGCCTCAAGTGTGCAAAGGTGGGAAGCTTGTCAATTTCACTGCAGCCTATAATGGTCTCTCTGGTTCAATTCCACCAAGTTTGAGAAACTGTTCATCATTATACAGAGTTCAACTTCAAAATAATCGGTTGACAGGTTATGCAGATCAGGATTTTGGTGCTCATCCTAATCTCACTTATGTTGACATCAGCTTCAACAGAGTGCAGGGTAATCTCTCTGCAAATTGGGGTGCCTGCCCAAGCTTAGAAGCTCTGATCATGGCTGGAAATTCAATTGGTGGAAATATTCCTGCTGAGATATTTCAGTTGAAAAAGTTGCAAAAGCTTGACCTATCATCAAACCAAATAACTGGTGAGATTCCACCACAAATCAGAAATGCCTCCATGTTATACCTTCTGAAGTTAAACAGAAACAATATTTCAGGTTTGATGCCTACAAGCTTTGGAAGTCTATCTAATTTAGAGTCATTAGACCTGTCAATGAACAGGCTAAGCGGATCCATTCCTTATCAAATAGGGAATTGCTACAAGCTTGTCAATTTAAATTTGAGTCATAATGACTTCAATGGCACTATCCCATATCAAATTGGGAATCTTGACTCCTTGGAAGATTTCTTGGACTTGAGTTTTAATTCACTTTCTGGAGAAATCCCTGTGGACCTTATTAAGCTTGACAACTTGATAAGTCTGAATCTGTCTCATAACAATCTATCAGGTTCTATCCCTGATTCCCTCAGTACAATGTTGAGCTTGTCAAGCATCAACCTCTCTTACAACCATTTGGAGGGTCCTGCCCCAAATAGTGGCATATTTAATTCTTCTTATCCATTAGATTTGAGTAATAACAAAGATTTATGTGGGAGAATCCAAGGTTTGAGACCTTGCAATGTTTCAATATCACACATGGGAAGCACCAAAGAGAAAGTTGTGATATCTATTCTTGCTTCTTTAGCAGGTGCACTACTTGTTACATTGGTGTTAGTTGGGATTTTTTTTATTTGTTCAAAGGAAAACTCAGGAGTTTTAGAACAGAATTCAGGAACCAAGAAAGAAAGTCCATTTTCAGTCTGTCAATTTGATGGGAAAGATCTGTATAAAGACATTGTTGAAGCAACAGAGAACTTTGATGGCAAGTATTGTGTTGGGGAAGGATCTTCTGGAAAAGTTTACAAAATGGTCATGCAAGGAGGTGAACAATTTGCTGTAAAGAAGTTTAGATGTGAAGAAGATGAAATGGACATGGAAAGTTTAAAATCCTTCAAGAGTGAAATCAAAGCCTTGACAGAAATCCGCCATCGAAACATTGTGAAGCTCTATGGATTTTGCTCACAAGGATCACACACTTTTGCTGTTTATGAGTACATGGAAGGAGGGACTTTAGCTGATTTTCTGAAAAATGACACAAAGGCATTAGAGTTAGATTGGCCTAAAAGGGTGGATGTTGTCAAAGGTGTAGCACAAGCTTTATCTTATATGCATCATGATTGTGATCCACCAATTATTCATAGAGACATATCAAGCAATAATATATTATTGTCCGCAAATCTTGAAGCCCATGTCTCAGACTTTGGCACAGCAAGATTCCTGAAGGCTAGCTCATCATCAATTTGGACAACATTTGCTGGCACACGTGGGTATGCTGCTCCAGGAAAACAAAGTGCTGTCATTGTGATTCACTCAAGGTTGTGTCAAATGAGATCAGTTCATTCTAAATGA 2463 0.3881 MMRSRVFFSLAVLLICALEVMFDFEHSCAFTNMAQHKIFPLFLIPLITCIVFWSLCPIASAALTESEALLKWKQSLPNYQPILDSWVTPSQANSSEAQALCSWRGINCDSSGSIVELNLNSTGLEGTIGNLNFSALPNLLVLNLQYNKLSGSIPQSIGMLSRLQYLSLEGNNFSGSIPQSLGHCTNLSVLSMALNNLSGIIPPSFGRLTNLTDVRFHRNNLHGDLPQEFGNVSSLIVVHLSYNNFTGHLPPQVCKGGKLVNFTAAYNGLSGSIPPSLRNCSSLYRVQLQNNRLTGYADQDFGAHPNLTYVDISFNRVQGNLSANWGACPSLEALIMAGNSIGGNIPAEIFQLKKLQKLDLSSNQITGEIPPQIRNASMLYLLKLNRNNISGLMPTSFGSLSNLESLDLSMNRLSGSIPYQIGNCYKLVNLNLSHNDFNGTIPYQIGNLDSLEDFLDLSFNSLSGEIPVDLIKLDNLISLNLSHNNLSGSIPDSLSTMLSLSSINLSYNHLEGPAPNSGIFNSSYPLDLSNNKDLCGRIQGLRPCNVSISHMGSTKEKVVISILASLAGALLVTLVLVGIFFICSKENSGVLEQNSGTKKESPFSVCQFDGKDLYKDIVEATENFDGKYCVGEGSSGKVYKMVMQGGEQFAVKKFRCEEDEMDMESLKSFKSEIKALTEIRHRNIVKLYGFCSQGSHTFAVYEYMEGGTLADFLKNDTKALELDWPKRVDVVKGVAQALSYMHHDCDPPIIHRDISSNNILLSANLEAHVSDFGTARFLKASSSSIWTTFAGTRGYAAPGKQSAVIVIHSRLCQMRSVHSK 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1765 820 FunFam Leucine-rich repeat receptor protein kinase MSP1 587 703 - -
Prci6g1765 820 ProSiteProfiles Protein kinase domain profile. 624 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1765 820 PANTHER LEUCINE RICH REPEAT KINASE 2 182 798 - -
Prci6g1765 820 Pfam Leucine Rich Repeat 354 373 IPR001611 GO:0005515
Prci6g1765 820 Pfam Leucine Rich Repeat 475 495 IPR001611 GO:0005515
Prci6g1765 820 Pfam Leucine rich repeat 379 437 IPR001611 GO:0005515
Prci6g1765 820 Pfam Leucine rich repeat 116 173 IPR001611 GO:0005515
Prci6g1765 820 PRINTS Leucine-rich repeat signature 355 368 - -
Prci6g1765 820 PRINTS Leucine-rich repeat signature 400 413 - -
Prci6g1765 820 ProSiteProfiles Leucine-rich repeat profile. 475 497 IPR001611 GO:0005515
Prci6g1765 820 Gene3D Transferase(Phosphotransferase) domain 1 704 805 - -
Prci6g1765 820 Pfam Protein kinase domain 630 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1765 820 Gene3D Ribonuclease Inhibitor 235 547 IPR032675 -
Prci6g1765 820 Gene3D Phosphorylase Kinase; domain 1 587 703 - -
Prci6g1765 820 ProSitePatterns Tyrosine protein kinases specific active-site signature. 749 761 IPR008266 GO:0004672|GO:0006468
Prci6g1765 820 ProSitePatterns Protein kinases ATP-binding region signature. 630 653 IPR017441 GO:0005524
Prci6g1765 820 Pfam Leucine rich repeat N-terminal domain 64 109 IPR013210 -
Prci6g1765 820 SUPERFAMILY L domain-like 101 253 - -
Prci6g1765 820 SUPERFAMILY Protein kinase-like (PK-like) 607 798 IPR011009 -
Prci6g1765 820 SUPERFAMILY RNI-like 201 534 - -
Prci6g1765 820 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 233 548 - -
Prci6g1765 820 FunFam Nuclear pore complex protein NUP107 62 226 - -
Prci6g1765 820 Gene3D Ribonuclease Inhibitor 62 228 IPR032675 -
Prci6g1765 820 ProSiteProfiles Leucine-rich repeat profile. 354 376 IPR001611 GO:0005515
Prci6g1765 820 SMART LRR_typ_2 232 256 IPR003591 -
Prci6g1765 820 SMART LRR_typ_2 473 497 IPR003591 -
Prci6g1765 820 SMART LRR_typ_2 352 376 IPR003591 -
Prci6g1765 820 SMART LRR_typ_2 160 184 IPR003591 -
Prci6g1765 820 SMART LRR_typ_2 136 159 IPR003591 -
Prci6g1765 820 SMART LRR_typ_2 208 231 IPR003591 -
Prci6g1765 820 SMART LRR_typ_2 400 424 IPR003591 -
Prci6g1765 820 SMART LRR_typ_2 377 399 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1765 Prci-Chr6 15008396 15011376 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1765 116 799 Receptor kinase-like Gene Family AT4G08850 44.320 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci6g1765 Pkinase 1.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1765 - - gmx:100814345 863.988