Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1758 ATGATTGTTACTCCAGTTATCAAGTATGATGTATTTCTTAGCTTTAGAGGGGAGGACACTCGCGACAATTTCACGAGTTATCTTTATGAAGCGCTTTGCAATGCAAATATTCATACTTTTATGGATGTAAAACTTGACAAAGGAGAACAGATCTCACCAATTCTCTTGAGAACCATAGAGGAGTCAAAGATATCTTTGATTATCTTCTCCAAAGATTATGCTTCTTCATCGTGGTGCATGGAAGAGCTTGTTCACATATTAGAATGCAAGAAAAAATTTGGAAGGATTGTGATACCTATTTTCTACAAGGTAGATCCATCAAATATACGCAAACAAAATGGAAGCTTTGGAGAGGGATTTGCTAAATTGAAACAAAAATTTAGACAAAGCCAAGACAAAGTGCAAAAGTGGACAAATGTTTTGATACAATCTTCAAGTCTCTCAGGATGGGATTCAAGAAATATCAGGCCTGAGCCCAAACTTATTAAAGAGATTATCAAAGATATTTTGAGCAAGTTGAATCATAACTCATCATATCACTTTGAAGGTCTAGCAGGCATTGATCATAATATTGAAAATATTAAAAAACTTTTATCTGAGGCTTGCATTGTGGGAATATGCGGCATGGGTGGTGCTGGGAAATCCACACTTGCTAAAGTTGTATTTCACAAGTTAAAATCACAATTTGGAGCTTTCTCCTTAGTTGAAAATGTAAGAGAACGACTTGCAAGAATTGGATTGGACAAGTTACAAGAAGAATGCCTCAAAGAATTATTAAATGACGACGACATTAATGCCTTTGACATAAAATCCACTTTTGTGAAAAGTAGGCTTCAACGCAAAAAAATTCTCCTTGTACTTGATGACGTGGACAATTCAATAATAGCTGAAGATTTAACTAAAGTGTATAATTGGTTTGGAGAAGGAAGTAGAATTATCATCACTTCAAGAGACATGCAAGTGCTTAAGAATGCTTCTGCACATTCAATATACCATGTTCCGAGTCTGGATTTCCATGATGCCATTCATCTCTTCAGTTTGAAAGCGTTCAAGCAAAATGAGCCATCTAAAGATTATAAAGAGCTATCAAAATTAGTTATTCATTATTGTCAAGGAAATCCACTAGCCTTGGTTGTGTTGGGTTGCTTTCTTTATGGTAGAGGAAAAGAAGAATGGGAAAGTGCTTTGGAAAAGCTAAATGAAGCGCCACCAAAGGATATAGTTGATGTTCTGAAATTGAGTTTTGATGGACTTGATGACAAACAAAAGAATGTGTTTCTTGACCTAACATTTTTTATCAAAGACACTGATGGGATCAATTTGGAGCTAACAAGACAATTACATGGTTCTTCTGTACACGTTGATATAAGTGTTCTCAAAGAAAGATCCCTCATTTCAGAAGATGAATATGGTTATTTTGTGATGCACGATCTTGTGGGAAAAATGGGCCTTGAAATTGCTAGACAACAGTTATTCTTTGGTCTTGAAAACCCCGTTCGTCTATGGTGGCATGAAGACATTCAAAAATTTTTCATCTATAATAAGGGAATTGAGGCCATCCGGTGCATGTCTTTGGATACGAGCAAGATAAAAAGGATTACATTGACAGCTAGTAACTTTAGAAAGATGTATAACTTAATATTGCTTAAAGTTTACAAGTCTGATCCGAGAAAGCTTTCAAAGTTGAATGTTTGTGAAGATCTAGATTATCTTCCAGAAGAACTTAGGTTTTTTTGTTGGGAAGAATATCCTCTGCCGTATGTGCCATTAAACCTTTGTGCGGATAATCTTGTTCAACTTAAAATGCCTAATAGTTATATCCGACAACTTTGGAATGGAGATCAGCATTTTCCAAATCTGAAGTTGATCAATTTACGAGGCTCGAAATCTCTTACTGCACTCCCAGATCTCTCTTGTGCCCCAAAGGTTGAATACATATATCTCGTTGGCTGTGTAAAGTTGGCTCAAATTCATTCCTCAACTGTCATGGGCGAGCTTTGTCGTTTAAATCTAGAAGATAGTGGGCGAAAGCAGATAAACATTGGTGGCACTATTGAAGATCATCAGAGAAGCAGTCCAGCTTTAGTGATAGATTACAATTATTTGGATACAATCGATTTGTCATTCAATAAAGTGAGGATGAAGCTCTTCCTTTCTGATGATGGCAACATTATCTCTGGTGTTGGACTGAAACATGTGGTAATGCTATTGGAAAATAATAGCAAGAGTGCAGATCAGTTAAAATTGAGGACACAAAGTTTGACATCTTTACTTCCATTTGTTAGTACTGTTAAATGGTTTAGGGTTTTCAAGCAACATGAAAACTATGACGATCGTTTTTATAATTGTCACAATGATCCTTCAGGCAATGATATTTCTATAAATGTTGGGGTGAGGATCAGTGATGAAGCAGAAAGCATTGTGGTGGGTTCATTACCATTGAGAAGATCAGAAGAGGGCACGGCATTGGAACTTGACGAAGAAGAAGATGGTGAAGATGAGTTAATGGAAGAAGAAGAATGTGAGACTAATATGCGATTAACAAGACTTCCCAATCACATCACTTGCTGGTCACTGTTGACACAAGTGAGATTAAACGAGAGTAATGTTATTGGAAATGCAGGTTGCAGCATTCCTCAGGTTTCAATTTTGAAATCACTTGCACTCTCTCATCATTGCAAAAGAATTCAACCTCTCTTGGATCTAACACTCTCTTTTGACATTACAGCACCTGATTATCATCGTCCTTATTCTTTTTGGCTCCCTTATTCAATGCCCTCCACTGAAGCTCGGTATCTTAAATCGTTCCGCTGTTATTTTGAGTATACGGTTGATCATATTGTTTTTGAGTATACTGAGTGGTAG 2865 0.3654 MIVTPVIKYDVFLSFRGEDTRDNFTSYLYEALCNANIHTFMDVKLDKGEQISPILLRTIEESKISLIIFSKDYASSSWCMEELVHILECKKKFGRIVIPIFYKVDPSNIRKQNGSFGEGFAKLKQKFRQSQDKVQKWTNVLIQSSSLSGWDSRNIRPEPKLIKEIIKDILSKLNHNSSYHFEGLAGIDHNIENIKKLLSEACIVGICGMGGAGKSTLAKVVFHKLKSQFGAFSLVENVRERLARIGLDKLQEECLKELLNDDDINAFDIKSTFVKSRLQRKKILLVLDDVDNSIIAEDLTKVYNWFGEGSRIIITSRDMQVLKNASAHSIYHVPSLDFHDAIHLFSLKAFKQNEPSKDYKELSKLVIHYCQGNPLALVVLGCFLYGRGKEEWESALEKLNEAPPKDIVDVLKLSFDGLDDKQKNVFLDLTFFIKDTDGINLELTRQLHGSSVHVDISVLKERSLISEDEYGYFVMHDLVGKMGLEIARQQLFFGLENPVRLWWHEDIQKFFIYNKGIEAIRCMSLDTSKIKRITLTASNFRKMYNLILLKVYKSDPRKLSKLNVCEDLDYLPEELRFFCWEEYPLPYVPLNLCADNLVQLKMPNSYIRQLWNGDQHFPNLKLINLRGSKSLTALPDLSCAPKVEYIYLVGCVKLAQIHSSTVMGELCRLNLEDSGRKQINIGGTIEDHQRSSPALVIDYNYLDTIDLSFNKVRMKLFLSDDGNIISGVGLKHVVMLLENNSKSADQLKLRTQSLTSLLPFVSTVKWFRVFKQHENYDDRFYNCHNDPSGNDISINVGVRISDEAESIVVGSLPLRRSEEGTALELDEEEDGEDELMEEEECETNMRLTRLPNHITCWSLLTQVRLNESNVIGNAGCSIPQVSILKSLALSHHCKRIQPLLDLTLSFDITAPDYHRPYSFWLPYSMPSTEARYLKSFRCYFEYTVDHIVFEYTEW 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1758 954 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 737 IPR044974 GO:0006952
Prci6g1758 954 Gene3D - 335 419 IPR042197 -
Prci6g1758 954 ProSiteProfiles TIR domain profile. 7 173 IPR000157 GO:0007165
Prci6g1758 954 SUPERFAMILY L domain-like 475 892 - -
Prci6g1758 954 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 429 IPR027417 -
Prci6g1758 954 Gene3D - 6 178 IPR035897 -
Prci6g1758 954 Pfam NB-ARC domain 190 403 IPR002182 GO:0043531
Prci6g1758 954 PRINTS Disease resistance protein signature 370 384 - -
Prci6g1758 954 PRINTS Disease resistance protein signature 615 631 - -
Prci6g1758 954 PRINTS Disease resistance protein signature 277 291 - -
Prci6g1758 954 PRINTS Disease resistance protein signature 203 218 - -
Prci6g1758 954 Gene3D Ribonuclease Inhibitor 510 715 IPR032675 -
Prci6g1758 954 SMART till_3 8 147 IPR000157 GO:0007165
Prci6g1758 954 SUPERFAMILY "Winged helix" DNA-binding domain 406 509 IPR036390 -
Prci6g1758 954 FunFam Disease resistance protein (TIR-NBS-LRR class) 6 175 - -
Prci6g1758 954 Pfam TIR domain 8 180 IPR000157 GO:0007165
Prci6g1758 954 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 150 IPR035897 -
Prci6g1758 954 Gene3D - 179 331 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1758 Prci-Chr6 14940530 14946471 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1758 9 651 WRKY Transcription Factor Family AT4G12020 29.349 7.25e-72 258