Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1754 ATGGATGCTGCCATTGCTTTAACACTCATAGGAGCTTTATTGATCTTATTGGCTTTACCAATTTCCAAAGCCATCAGATTTGTCGCCTCTTCTCTTTGTGGTATCCGTCCCGTTGCTATTAATGAGTGCAGTTGTAAGGATGCTGCTGATTCAATTTCAATGGTTTCTTCTCAGATGATTGTTACTCCAGTTATCAAGTATGATGTATTTCTTAGCTTTAGAGGGGAGGACACTCGCGACAATTTCACGAGTTATCTTTATGAAGCGCTTTGCAATGCAAATATTCATACTTTTATGGATGTAAAACTTGACAAAGGAGAACAGATCTCACCAATTCTCTTGAGAACCATAGAGGAGTCAAAGATATCTTTGATTATCTTCTCCAAAGATTATGCTTCTTCATCGTGGTGCATGGAAGAGCTTGTTCACATATTAGAATGCAAGAAAAAATTTGGAAGGATTGTGATACCTATTTTCTACAAGGTAGATCCATCAAATATACGCAAACAAAATGGAAGCTTTGGAGAGGGATTTGCTAAATTGAAACAAAAATTTAGACAAAGCCAAGACAAAGTGCAAAAGTGGACAAATGTTTTGATACAATCTTCAAGTCTCTCAGGATGGGATTCAAGAAATATCAGGCCTGAGCCCAAACTTATTAAAGAGATTATCAAAGATATTTTGAGCAAGTTGAATCATAACTCATCATATCACTTTGAAGGTCTAGCAGGCATTGATCATAATATTGAAAATATTAAAAAACTTTTATCTGAGGCTTGCATTGTGGGAATATGCGGCATGGGTGGTGCTGGGAAATCCACACTTGCTAAAGTTGTATTTCACAAGTTAAAATCACAATTTGGAGCTTTCTCCTTAGTTGAAAATGTAAGAGAACGACTTGCAAGAATTGGATTGGACAAGTTACAAGAAGAATGCCTCAAAGAATTATTAAATGACGACGACATTAATGCCTTTGACATAAAATCCACTTTTGTGAAAAGTAGGCTTCAACGCAAAAAAATTCTCCTTGTACTTGATGACGTGGACAATTCAATAATAGCTGAAGATTTAACTAAAGTGTATAATTGGTTTGGAGAAGGAAGTAGAATTATCATCACTTCAAGAGACATGCAAGTGCTTAAGAATGCTTCTGCACATTCAATATACCATGTTCCGAGTCTGGATTTCCATGATGCCATTCATCTCTTCAGTTTGAAAGCGTTCAAGCAAAATGAGCCATCTAAAGATTATAAAGAGCTATCAAAATTAGTTATTCATTATTGTCAAGGAAATCCACTAGCCTTGGTTGTGTTGGGTTGCTTTCTTTATGGTAGAGGAAAAGAAGAATGGGAAAGTGCTTTGGAAAAGCTAAATGAAGCGCCACCAAAGGATATAGTTGATGTTCTGAAATTGAGTTTTGATGGACTTGATGACAAACAAAAGAATGTGTTTCTTGACCTAACATTTTTTATCAAAGACACTGATGGGATCAATTTGGAGCTAACAAGACAATTACATGGTTCTTCTGTACACGTTGATATAAGTGTTCTCAAAGAAAGATCCCTCATTTCAGAAGATGAATATGGTTATTTTGTGATGCACGATCTTGTGGGAAAAATGGGCCTTGAAATTGCTAGACAACAGTTATTCTTTGGTCTTGAAAACCCCGTTCGTCTATGGTGGCATGAAGACATTCAAAAATTTTTCATCTATAATAAGCATTTTCCAAATCTGAAGTTGATCAATTTACGAGGCTCGAAATCTCTTACTGCACTCCCAGATCTCTCTTGTGCCCCAAAGGTTGAATACATATATCTCGTTGGCTGTGTAAAGTTGGCTCAAATTCATTCCTCAACTGTCATGGGCGAGCTTTGTCGTTTAAATCTAGAAGATAGTGGGCGAAAGCAGATAAACATTGGTGGCACTATTGAAGATCATCAGAGAAGCAGTCCAGCTTTAGTGATAGATTACAATTATTTGGATACAATCGATTTGTCATTCAATAAAGTGAGGATGAAGCTCTTCCTTTCTGATGATGGCAACATTATCTCTGGTGTTGGACTGAAACATGTGGTAATGCTATTGGAAAATAATAGCAAGAGTGCAGATCAGTTAAAATTGAGGACACAAAGTTTGACATCTTTACTTCCATTTGTTAGTACTGTTAAATGGTTTAGGGTTTTCAAGCAACATGAAAACTATGACGATCGTTTTTATAATTGTCACAATGATCCTTCAGGCAATGATATTTCTATAAATGTTGGGGTGAGGATCAGTGATGAAGCAGAAAGCATTGTGGTGGGTTCATTACCATTGAGAAGATCAGAAGAGGGCACGGCATTGGAACTTGACGAAGAAGAAGATGGTGAAGATGAGTTAATGGAAGAAGAAGAATGTGAGACTAATATGCGATTAACAAGACTTCCCAATCACATCACTTGCTGGTCACTGTTGACACAAGTGAGATTAAACGAGAGTAATGTTATTGGAAATGCAGGTTGCAGCATTCCTCAGGTTTCAATTTTGAAATCACTTGCACTCTCTCATCATTGCAAAAGAATTCAACCTCTCTTGGATCTAACACTCTCTTTTGACATTACAGCACCTGATTATCATCGTCCTTATTCTTTTTGGCTCCCTTATTCAATGCCCTCCACTGAAGCTCGGTATCTTAAATCGTTCCGCTGTTATTTTGAGTATACGGTTGATCATATTGTTTTTGAGTATACTGAGTGGTAG 2739 0.3687 MDAAIALTLIGALLILLALPISKAIRFVASSLCGIRPVAINECSCKDAADSISMVSSQMIVTPVIKYDVFLSFRGEDTRDNFTSYLYEALCNANIHTFMDVKLDKGEQISPILLRTIEESKISLIIFSKDYASSSWCMEELVHILECKKKFGRIVIPIFYKVDPSNIRKQNGSFGEGFAKLKQKFRQSQDKVQKWTNVLIQSSSLSGWDSRNIRPEPKLIKEIIKDILSKLNHNSSYHFEGLAGIDHNIENIKKLLSEACIVGICGMGGAGKSTLAKVVFHKLKSQFGAFSLVENVRERLARIGLDKLQEECLKELLNDDDINAFDIKSTFVKSRLQRKKILLVLDDVDNSIIAEDLTKVYNWFGEGSRIIITSRDMQVLKNASAHSIYHVPSLDFHDAIHLFSLKAFKQNEPSKDYKELSKLVIHYCQGNPLALVVLGCFLYGRGKEEWESALEKLNEAPPKDIVDVLKLSFDGLDDKQKNVFLDLTFFIKDTDGINLELTRQLHGSSVHVDISVLKERSLISEDEYGYFVMHDLVGKMGLEIARQQLFFGLENPVRLWWHEDIQKFFIYNKHFPNLKLINLRGSKSLTALPDLSCAPKVEYIYLVGCVKLAQIHSSTVMGELCRLNLEDSGRKQINIGGTIEDHQRSSPALVIDYNYLDTIDLSFNKVRMKLFLSDDGNIISGVGLKHVVMLLENNSKSADQLKLRTQSLTSLLPFVSTVKWFRVFKQHENYDDRFYNCHNDPSGNDISINVGVRISDEAESIVVGSLPLRRSEEGTALELDEEEDGEDELMEEEECETNMRLTRLPNHITCWSLLTQVRLNESNVIGNAGCSIPQVSILKSLALSHHCKRIQPLLDLTLSFDITAPDYHRPYSFWLPYSMPSTEARYLKSFRCYFEYTVDHIVFEYTEW 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1754 912 Gene3D - 393 477 IPR042197 -
Prci6g1754 912 Pfam NB-ARC domain 248 461 IPR002182 GO:0043531
Prci6g1754 912 Gene3D - 64 236 IPR035897 -
Prci6g1754 912 FunFam Disease resistance protein (TIR-NBS-LRR class) 64 233 - -
Prci6g1754 912 SUPERFAMILY L domain-like 533 850 - -
Prci6g1754 912 ProSiteProfiles TIR domain profile. 65 231 IPR000157 GO:0007165
Prci6g1754 912 Pfam TIR domain 66 238 IPR000157 GO:0007165
Prci6g1754 912 SUPERFAMILY "Winged helix" DNA-binding domain 464 567 IPR036390 -
Prci6g1754 912 PRINTS Disease resistance protein signature 261 276 - -
Prci6g1754 912 PRINTS Disease resistance protein signature 428 442 - -
Prci6g1754 912 PRINTS Disease resistance protein signature 573 589 - -
Prci6g1754 912 PRINTS Disease resistance protein signature 335 349 - -
Prci6g1754 912 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 67 676 IPR044974 GO:0006952
Prci6g1754 912 Gene3D - 237 389 IPR027417 -
Prci6g1754 912 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 231 487 IPR027417 -
Prci6g1754 912 SMART till_3 66 205 IPR000157 GO:0007165
Prci6g1754 912 SUPERFAMILY Toll/Interleukin receptor TIR domain 65 208 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1754 Prci-Chr6 14940530 14951173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1754 67 570 WRKY Transcription Factor Family AT4G12020 27.626 3.38e-47 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1754 - - pcin:129286024 786.563