Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1753 ATGGATGCTGCCATTGCTTTAACACTCATAGGAGCTTTATTGATCTTATTGGCTTTACCAATTTCCAAAGCCATCAGATTTGTCGCCTCTTCTCTTTGTGGTATCCGTCCCGTTGCTATTAATGAGTGCAGTTGTAAGGATGCTGCTGATTCAATTTCAATGGTTTCTTCTCAGATGATTGTTACTCCAGTTATCAAGTATGATGTATTTCTTAGCTTTAGAGGGGAGGACACTCGCGACAATTTCACGAGTTATCTTTATGAAGCGCTTTGCAATGCAAATATTCATACTTTTATGGATGTAAAACTTGACAAAGGAGAACAGATCTCACCAATTCTCTTGAGAACCATAGAGGAGTCAAAGATATCTTTGATTATCTTCTCCAAAGATTATGCTTCTTCATCGTGGTGCATGGAAGAGCTTGTTCACATATTAGAATGCAAGAAAAAATTTGGAAGGATTGTGATACCTATTTTCTACAAGGTAGATCCATCAAATATACGCAAACAAAATGGAAGCTTTGGAGAGGGATTTGCTAAATTGAAACAAAAATTTAGACAAAGCCAAGACAAAGTGCAAAAGTGGACAAATGTTTTGATACAATCTTCAAGTCTCTCAGGATGGGATTCAAGAAATATCAGGCTTCAACGCAAAAAAATTCTCCTTGTACTTGATGACGTGGACAATTCAATAATAGCTGAAGATTTAACTAAAGTGTATAATTGGTTTGGAGAAGGAAGTAGAATTATCATCACTTCAAGAGACATGCAAGTGCTTAAGAATGCTTCTGCACATTCAATATACCATGTTCCGAGTCTGGATTTCCATGATGCCATTCATCTCTTCAGTTTGAAAGCGTTCAAGCAAAATGAGCCATCTAAAGATTATAAAGAGCTATCAAAATTAGTTATTCATTATTGTCAAGGAAATCCACTAGCCTTGGTTGTGTTGGGTTGCTTTCTTTATGGTAGAGGAAAAGAAGAATGGGAAAGTGCTTTGGAAAAGCTAAATGAAGCGCCACCAAAGGATATAGTTGATGTTCTGAAATTGAGTTTTGATGGACTTGATGACAAACAAAAGAATGTGTTTCTTGACCTAACATTTTTTATCAAAGACACTGATGGGATCAATTTGGAGCTAACAAGACAATTACATGGTTCTTCTGTACACGTTGATATAAGTGTTCTCAAAGAAAGATCCCTCATTTCAGAAGATGAATATGGTTATTTTGTGATGCACGATCTTGTGGGAAAAATGGGCCTTGAAATTGCTAGACAACAGTTATTCTTTGGTCTTGAAAACCCCGTTCGTCTATGGTGGCATGAAGACATTCAAAAATTTTTCATCTATAATAAGGGAATTGAGGCCATCCGGTGCATGTCTTTGGATACGAGCAAGATAAAAAGGATTACATTGACAGCTAGTAACTTTAGAAAGATGTATAACTTAATATTGCTTAAAGTTTACAAGTCTGATCCGAGAAAGCTTTCAAAGTTGAATGTTTGTGAAGATCTAGATTATCTTCCAGAAGAACTTAGGTTTTTTTGTTGGGAAGAATATCCTCTGCCGTATGTGCCATTAAACCTTTGTGCGGATAATCTTGTTCAACTTAAAATGCCTAATAGTTATATCCGACAACTTTGGAATGGAGATCAGCATTTTCCAAATCTGAAGTTGATCAATTTACGAGGCTCGAAATCTCTTACTGCACTCCCAGATCTCTCTTGTGCCCCAAAGGTTGAATACATATATCTCGTTGGCTGTGTAAAGTTGGCTCAAATTCATTCCTCAACTGTCATGGGCGAGCTTTGTCGTTTAAATCTAGAAGATAGTGGGCGAAAGCAGATAAACATTGGTGGCACTATTGAAGATCATCAGAGAAGCAGTCCAGCTTTAGTGATAGATTACAATTATTTGGATACAATCGATTTGTCATTCAATAAAGTGAGGATGAAGCTCTTCCTTTCTGATGATGGCAACATTATCTCTGGTGTTGGACTGAAACATGTGGTAATGCTATTGGAAAATAATAGCAAGAGTGCAGATCAGTTAAAATTGAGGACACAAAGTTTGACATCTTTACTTCCATTTGTTAGTACTGTTAAATGGTTTAGGGTTTTCAAGCAACATGAAAACTATGACGATCGTTTTTATAATTGTCACAATGATCCTTCAGGCAATGATATTTCTATAAATGTTGGGGTGAGGATCAGTGATGAAGCAGAAAGCATTGTGGTGGGTTCATTACCATTGAGAAGATCAGAAGAGGGCACGGCATTGGAACTTGACGAAGAAGAAGATGGTGAAGATGAGTTAATGGAAGAAGAAGAATGTGAGACTAATATGCGATTAACAAGACTTCCCAATCACATCACTTGCTGGTCACTGTTGACACAAGTGAGATTAAACGAGAGTAATGTTATTGGAAATGCAGGTTGCAGCATTCCTCAGGTTTCAATTTTGAAATCACTTGCACTCTCTCATCATTGCAAAAGAATTCAACCTCTCTTGGATCTAACACTCTCTTTTGACATTACAGCACCTGATTATCATCGTCCTTATTCTTTTTGGCTCCCTTATTCAATGCCCTCCACTGAAGCTCGGTATCTTAAATCGTTCCGCTGTTATTTTGAGTATACGGTTGATCATATTGTTTTTGAGTATACTGAGTGGTAG 2676 0.3707 MDAAIALTLIGALLILLALPISKAIRFVASSLCGIRPVAINECSCKDAADSISMVSSQMIVTPVIKYDVFLSFRGEDTRDNFTSYLYEALCNANIHTFMDVKLDKGEQISPILLRTIEESKISLIIFSKDYASSSWCMEELVHILECKKKFGRIVIPIFYKVDPSNIRKQNGSFGEGFAKLKQKFRQSQDKVQKWTNVLIQSSSLSGWDSRNIRLQRKKILLVLDDVDNSIIAEDLTKVYNWFGEGSRIIITSRDMQVLKNASAHSIYHVPSLDFHDAIHLFSLKAFKQNEPSKDYKELSKLVIHYCQGNPLALVVLGCFLYGRGKEEWESALEKLNEAPPKDIVDVLKLSFDGLDDKQKNVFLDLTFFIKDTDGINLELTRQLHGSSVHVDISVLKERSLISEDEYGYFVMHDLVGKMGLEIARQQLFFGLENPVRLWWHEDIQKFFIYNKGIEAIRCMSLDTSKIKRITLTASNFRKMYNLILLKVYKSDPRKLSKLNVCEDLDYLPEELRFFCWEEYPLPYVPLNLCADNLVQLKMPNSYIRQLWNGDQHFPNLKLINLRGSKSLTALPDLSCAPKVEYIYLVGCVKLAQIHSSTVMGELCRLNLEDSGRKQINIGGTIEDHQRSSPALVIDYNYLDTIDLSFNKVRMKLFLSDDGNIISGVGLKHVVMLLENNSKSADQLKLRTQSLTSLLPFVSTVKWFRVFKQHENYDDRFYNCHNDPSGNDISINVGVRISDEAESIVVGSLPLRRSEEGTALELDEEEDGEDELMEEEECETNMRLTRLPNHITCWSLLTQVRLNESNVIGNAGCSIPQVSILKSLALSHHCKRIQPLLDLTLSFDITAPDYHRPYSFWLPYSMPSTEARYLKSFRCYFEYTVDHIVFEYTEW 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1753 891 Gene3D Ribonuclease Inhibitor 447 653 IPR032675 -
Prci6g1753 891 Pfam TIR domain 66 201 IPR000157 GO:0007165
Prci6g1753 891 Pfam NB-ARC domain 214 340 IPR002182 GO:0043531
Prci6g1753 891 Gene3D - 272 356 IPR042197 -
Prci6g1753 891 Gene3D - 64 236 IPR035897 -
Prci6g1753 891 SUPERFAMILY "Winged helix" DNA-binding domain 343 446 IPR036390 -
Prci6g1753 891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 366 IPR027417 -
Prci6g1753 891 SUPERFAMILY L domain-like 412 829 - -
Prci6g1753 891 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 214 651 IPR044974 GO:0006952
Prci6g1753 891 PRINTS Disease resistance protein signature 552 568 - -
Prci6g1753 891 PRINTS Disease resistance protein signature 214 228 - -
Prci6g1753 891 PRINTS Disease resistance protein signature 307 321 - -
Prci6g1753 891 ProSiteProfiles TIR domain profile. 65 217 IPR000157 GO:0007165
Prci6g1753 891 SUPERFAMILY Toll/Interleukin receptor TIR domain 65 208 IPR035897 -
Prci6g1753 891 SMART till_3 66 205 IPR000157 GO:0007165
Prci6g1753 891 FunFam Disease resistance protein (TIR-NBS-LRR class) 64 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1753 Prci-Chr6 14940530 14951173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1753 214 623 WRKY Transcription Factor Family AT5G45050 34.186 6.44e-53 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1753 - - pcin:129295832 1158.28