Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1721 ATGTCCTCCGCTAATCCCTATGTAATCATTGACGACGGCGACGATGACGAAGTGTTTGATTGGGATGCCGCTGCACGAGAAATCGATGTGGCTTGTAAAGTCGCAAAGCCCTCCACTCCGCTCGTTGGTGATACTTCCAATTCGCGCCAAATGACTTTACATAAATTTCTGGATAAGAAGGAAGCCCCAAGGCCTCGACTCGAGGAACCCAAGGTCTGCAAGAATGAGCAAGAATGCTTCGTAGGAGATGAAGGGGTGAGCTGCATTGAGGTTGATGCTGAGGCAGTCAAAACTTGGATATACCCAGTCAATGTTCCTCTTCGTGACTACCAATTTGCTATAACAAAGTCTGCTTTATTTTCAAACACATTGGTGGCATTGCCAACAGGACTTGGGAAAACTCTGATTGCTGCAGTTGTCATGTACAACTACTTCCGATGGTTTCCCAGAGGAAAAATTGTTTTTACTGCTCCTTCTCGGCCACTGGTCATGCAACAGATTGAAGCATGCCATAATATCGTAGGAATACCTCAAGAATGGACAATTGATATGACAGGTCAAGTAAGCCCAGCTAAAAGAGCATGCTTTTGGAAAACCAAACGAGTTTTCTTCGTCACTCCACAAGTATTGGAAAAAGATATTCATTCTGGTAAATGTTTGGTGAAATACTTGGTATGTTTGGTAATTGATGAAGCCCACAGAGCAATGGGAAATTACTCTTATTGTGAAGTAGTTCGTGAGTTAATGGCTGTGCCAGTGCAACTGCGAATATTGGCTTTAACAGCAACACCAGGAGCAAAGCAGCAAACAGTCCAGCAAGTCATTGATAATCTGCAAATCTCCAAGCTCGAATATCGCAATGAAAATGATCCCGATGTAATCTCATATGTTCACAAAAGGAAGATAGAGCTGATTCAGGTTGCAATGGGTCAAGATGCTGTTGAAATAAACAAGCAGCTTTTGGATGTAATACGCCCACTTGTAGGTCGGCTCTCAGCAATTGGAGTTCTCAAGAATAGAGATTACCGCACATTGAGCCCTTGTGAATTACTTGAAATGCGGGAAAAATTTCGTCAAGCACCTCCACAAGATCTTTCCAATATCGATGTTGAGGGCCATTTTGGAGTTCTTATTAGTCTTTACTACATCCATAAGCTACTTTCAAGTCATGGAATCAGGCCAGCGCACGAGATGCTTGAACGAAAATTGAAGCAAGGATTTTTCGCAAAATATATGAGTAAAAATGAAGTTCTTCTGACGGCAAGGATGTTGATGCAGCAAAACTTATCTCATGGAGCACCAAGTCCCAAGTTGTCCAAAATGCTTGAAATACTGCGGGAACATTTCAAAGCCAATGATCCTCAGAGCTCTAGAGTTATTATTTTCTCCAATTATAGAGAAAGTGTGAGGGATATAATGGATGCAATAGCAAATATTGGAGAACCAATCAGAGCTACCCAGTTTATTGGTCAAAGTTCAGGGAAAACAATGAAGGGTCAGTCCCAAAAAGTTCAACAGGCAGTGCTGCAGAAATTCCGTTCTGGAGCCTACAATGTCATTGTTGCTACATCAATTGGTGAAGAAGGTCTTGATATCATGGAAGTTGATCTCGTTGTAGCTTTTGATGCTAATGTGTCACCACTAAGAATGATTCAGCGCATGGGGAGAACTGGAAGAAAGCACGATGGACAAGTTGTAGTTTTAGCTTGTGAAGGGACTGAACTGAAGGGATACTTGCGGAAACAAGCTAAGAGCAAGGCTATTAGTAAACACATGCGAAACGGGGGCATAAATAGCTTCACTTTTCATCCTAGTCCCAGAATGATTCCCCACGTCTTTAAACCAGAGGTTCAGTTTGTTGAGCTGTCAATTGAGAAATTTGTTTCCCGTGAGAAAAAAGTAAAAGATGACTCTATTCAGATACATGCATCCATTGGCAAACTTACGGTTGCTGAGAATAATATACTTGCGAAGTATTTTCCCGCCACTGGTGAAAATACGTGGAAGCCATCTCTTATTGCCTTTCCTTACTTCCAGACGTATCCTTCTAAAACACATAAAGTGAATCATTCTTGTAGAGCAATAATGCTCATTGATTTGATGCAACGTCTGCAAGGACAAGCATCAATCCTAGGAAATAGCAAAACTTCCATTCTTCAGGATGGCCTGTGTATAGAAGATAGTAATGCACTCGACTTAAACAAGATTGATGAAGTTAGATCAGGGATTCAAACGGATGAAGACTTTGTTGATCTAACTGCACCAGATAATATTGTGGGAGAACAGAGATCGCCTAGTACAAGTTGCATAAAGAAGGATGATTTGCCGTCATCTAGCTTTATTGACTTAGATGAAAATAAAGAGGAAACATGTGAGTTTGAAGAGACAGTTCCTGACACTCCAATTGCTAAGACAGTTTTGTCAAATGAAGGACATAGTGATGGTAAATGCCTGATATTGCTCAGATCAAGACATCTTTGTTGCAAGACGATGCATTCAAATGACATCACCGAGTCACAGTGTAGTCCCCGTTTAACCAGTTTAATTACAAGTGGTGTTGTTCCAGAGTCTCCCATCAACGAGAGAGGTGATTTTCTTCCAGGGTTATTAAGAAGCCAGCTTGTCATTCGGGACAGTAAACCGCCTATTCAACTCCAGACGGAACAAATTACCTCATGTTCGAGGACAAATGAGAAGGTCCTTATTGATAATGCCACAGATGTAAATAATGTATCTATTGATCCTGCCGATATTGAAACTCAAACCATTTTATTCGAACGGAAGAGTTGTGCATTTAGAAGAGGTCATGTCTTTAGTTCTCCTACAGTGGAGGAAGGCCAAAATCCTTTTGCGGACATTACAAACCACAGCTTTAGTGAAGAATCACCTTTATGTTGTGGAGAAGTTACTGAAAGTGTGAAGCCGGCACGTAAATTTAAAAGGTTGCGTAAAGATGGTGATGGTAGATGTCATAGGAAAGAGAAAAGCCTGAAGGATCGTGTTTCAACAGAAAATCTTGGCAAAATTTCATTAACCCCTGGTTCTAAACAAAATAAACATGGCCGAGGTGGAAGGAAATCAATGCACAAAGTCAGAGTCTTCATTGACGATGAGGCTGAGGTATCTTCAGAAGCTGATGTTTCTAATGATGAAGATGGTGAGGATGACGGTTCATTGGATAGTTTCATAGACGACAGGATGAACCCTACAGCATCCACTCAGTCTAAAGCCAGCGGAATAGACATGATGGCCATATACAGGCGTTCTTTGCTCAGTCAACTACCAGTTGAAGGAGGGACCAACATTTCAGCTACATTTAGTCCAGAGTACGTGTCATCCATGACTAAAATCAGCGAAAATGGAGATTCTTCAGGCAGCATACCAAGACATCTTCAGACACCTCAAATTGAGCCAACAAATCAGTCAGCTTCGAAGAGTATGCAATCAGTTGAAGTCAACCAAATCACCTCTGAAGCTGTACCTTCAAGTTGTTTTTCTATCGAAACCACAACAGAGATGAGAAGTCGCAAAAGCAAATTGACATTTCATCATTTCGGATTTCCAAGTACGAACCTTGAGCAGGAATTTGCTCTTCAATCAAATGAAGAATCTACGAAAGTTAATGCATCAAAGGATATTCTCTGTGATGATCACATTTTTGATAATATGGATCTTGATGAGTTGGAGGCTCAAGCAGCTTCTCTTCTAAAACAAAAATCAGATTTGTCAACTCAGAAGCAAGTTACACAAACAATGCCTCAATCTCACTTGCACAACCCTCACCTTTCCAACCCATCATTCGATCTTGGGATATGA 3816 0.4114 MSSANPYVIIDDGDDDEVFDWDAAAREIDVACKVAKPSTPLVGDTSNSRQMTLHKFLDKKEAPRPRLEEPKVCKNEQECFVGDEGVSCIEVDAEAVKTWIYPVNVPLRDYQFAITKSALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPRGKIVFTAPSRPLVMQQIEACHNIVGIPQEWTIDMTGQVSPAKRACFWKTKRVFFVTPQVLEKDIHSGKCLVKYLVCLVIDEAHRAMGNYSYCEVVRELMAVPVQLRILALTATPGAKQQTVQQVIDNLQISKLEYRNENDPDVISYVHKRKIELIQVAMGQDAVEINKQLLDVIRPLVGRLSAIGVLKNRDYRTLSPCELLEMREKFRQAPPQDLSNIDVEGHFGVLISLYYIHKLLSSHGIRPAHEMLERKLKQGFFAKYMSKNEVLLTARMLMQQNLSHGAPSPKLSKMLEILREHFKANDPQSSRVIIFSNYRESVRDIMDAIANIGEPIRATQFIGQSSGKTMKGQSQKVQQAVLQKFRSGAYNVIVATSIGEEGLDIMEVDLVVAFDANVSPLRMIQRMGRTGRKHDGQVVVLACEGTELKGYLRKQAKSKAISKHMRNGGINSFTFHPSPRMIPHVFKPEVQFVELSIEKFVSREKKVKDDSIQIHASIGKLTVAENNILAKYFPATGENTWKPSLIAFPYFQTYPSKTHKVNHSCRAIMLIDLMQRLQGQASILGNSKTSILQDGLCIEDSNALDLNKIDEVRSGIQTDEDFVDLTAPDNIVGEQRSPSTSCIKKDDLPSSSFIDLDENKEETCEFEETVPDTPIAKTVLSNEGHSDGKCLILLRSRHLCCKTMHSNDITESQCSPRLTSLITSGVVPESPINERGDFLPGLLRSQLVIRDSKPPIQLQTEQITSCSRTNEKVLIDNATDVNNVSIDPADIETQTILFERKSCAFRRGHVFSSPTVEEGQNPFADITNHSFSEESPLCCGEVTESVKPARKFKRLRKDGDGRCHRKEKSLKDRVSTENLGKISLTPGSKQNKHGRGGRKSMHKVRVFIDDEAEVSSEADVSNDEDGEDDGSLDSFIDDRMNPTASTQSKASGIDMMAIYRRSLLSQLPVEGGTNISATFSPEYVSSMTKISENGDSSGSIPRHLQTPQIEPTNQSASKSMQSVEVNQITSEAVPSSCFSIETTTEMRSRKSKLTFHHFGFPSTNLEQEFALQSNEESTKVNASKDILCDDHIFDNMDLDELEAQAASLLKQKSDLSTQKQVTQTMPQSHLHNPHLSNPSFDLGI 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1721 1271 SMART ultradead3 103 303 IPR014001 -
Prci6g1721 1271 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 114 282 IPR014001 -
Prci6g1721 1271 SMART helicmild6 471 561 IPR001650 -
Prci6g1721 1271 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 5 1250 - -
Prci6g1721 1271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 574 IPR027417 -
Prci6g1721 1271 MobiDBLite consensus disorder prediction 984 1002 - -
Prci6g1721 1271 MobiDBLite consensus disorder prediction 1040 1059 - -
Prci6g1721 1271 CDD DEXDc_FANCM 105 286 IPR044749 GO:0005524
Prci6g1721 1271 MobiDBLite consensus disorder prediction 1244 1271 - -
Prci6g1721 1271 Gene3D - 430 595 IPR027417 -
Prci6g1721 1271 Gene3D - 103 297 IPR027417 -
Prci6g1721 1271 Coils Coil 1225 1245 - -
Prci6g1721 1271 FunFam Fanconi anemia, complementation group M 102 297 - -
Prci6g1721 1271 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 437 605 IPR001650 -
Prci6g1721 1271 CDD SF2_C_FANCM_Hef 435 569 - -
Prci6g1721 1271 Gene3D hef helicase domain 311 429 - -
Prci6g1721 1271 MobiDBLite consensus disorder prediction 1244 1262 - -
Prci6g1721 1271 Pfam Helicase conserved C-terminal domain 442 560 IPR001650 -
Prci6g1721 1271 Pfam Type III restriction enzyme, res subunit 120 264 IPR006935 GO:0003677|GO:0005524|GO:0016787
Prci6g1721 1271 FunFam ATP-dependent RNA helicase, putative 425 595 - -
Prci6g1721 1271 MobiDBLite consensus disorder prediction 984 1075 - -
Prci6g1721 1271 CDD FANCM_ID 314 418 IPR039686 GO:0006281|GO:0043138
Prci6g1721 1271 MobiDBLite consensus disorder prediction 1003 1017 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1721 460 559 Eukaryotic Initiation Factors Gene Family AT3G13920 28.000 8.55e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1721 K10896 - qsa:O6P43_030010 1350.5