Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1709 ATGAACGACATGGATTCCTTCATATTTGAGAGCCACACCATTCCTTGCATCTCTTTTGTCTCCCTCCCCCCCTCTCCTTCCATGGCTTCCGTAGCAGCCACACAGGTTCTATTGCAGAACGCTCTCTTGCGAAATCACCCATCAACAGGATCCTTTGGACTCCATAGCTCCACTTCTAAAGCTCTGGTTCTTCGACTTCGAGCCTCACAGACGTCAGAGGGGCCTCGCGATCGCCAGAGAGCACCCCCTGGAGTTGATACAAGAATTCATTGGGACAACGAAGATGAGGGTTGGATTGGAGGCACCACAAGTAACACGAGACAGTCCAAAGCAGAGGGTGCTGGGCCAAATTTTGCTGATTTGCTTTCTGATTCTTCTGGTTCTCATTACGAATTTTTAGGAGTCTCAGCAGAAGCTGATTTAGAAGACATTAAAGCAGCTTACAGGAGATTATCAAAGGAATATCACCCAGATACAACTTCACTGCCTCTAAAAACTGCCTCAGATAAATTCATGAAGTTGAGAGAAGTCTACAATGTCCTGAGCAATGAAGAGAGTCGAAAATTCTATGATTGGACGCTTCTCCAGGAGGCGGCAAGCCGGCAATCAGAGAAGATGAAGATGAGATTGGAGGATCCTTTTGAGAAAGAAGCGAAGAACTGGGAATCTGTTCCTGACATGGTTGATCGGCTTGGAGGAAGGAACATGAAGCTCAGTGATCAAGCAACGACTGCTCTCACTATTGATGTTTTCATCATTATTTTTGCGATTTGCTGCATCATTTATGTAATATACTTCAAAGAACCATATTACTAG 816 0.451 MNDMDSFIFESHTIPCISFVSLPPSPSMASVAATQVLLQNALLRNHPSTGSFGLHSSTSKALVLRLRASQTSEGPRDRQRAPPGVDTRIHWDNEDEGWIGGTTSNTRQSKAEDXAGPNFADLLSDSSGSHYEFLGVSAEADLEDIKAAYRRLSKEYHPDTTSLPLKTASDKFMKLREVYNVLSNEESRKFYDWTLLQEAASRQSEKMKMRLEDPFEKEAKNWESVPDMVDRLGGRNMKLSDQATTALTIDVFIIIFAICCIIYVIYFKEPYY 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1709 272 SMART dnaj_3 128 187 IPR001623 -
Prci6g1709 272 Pfam DnaJ domain 130 192 IPR001623 -
Prci6g1709 272 SUPERFAMILY Chaperone J-domain 129 198 IPR036869 -
Prci6g1709 272 Gene3D DnaJ domain 120 216 IPR036869 -
Prci6g1709 272 MobiDBLite consensus disorder prediction 71 95 - -
Prci6g1709 272 MobiDBLite consensus disorder prediction 98 112 - -
Prci6g1709 272 ProSiteProfiles dnaJ domain profile. 129 195 IPR001623 -
Prci6g1709 272 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 28 271 IPR044618 -
Prci6g1709 272 PRINTS DnaJ domain signature 131 149 IPR001623 -
Prci6g1709 272 PRINTS DnaJ domain signature 167 187 IPR001623 -
Prci6g1709 272 PRINTS DnaJ domain signature 149 164 IPR001623 -
Prci6g1709 272 CDD DnaJ 130 184 IPR001623 -
Prci6g1709 272 MobiDBLite consensus disorder prediction 65 121 - -
Prci6g1709 272 ProSitePatterns Nt-dnaJ domain signature. 172 191 IPR018253 -
Prci6g1709 272 FunFam DnaJ homolog subfamily C member 4 118 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1709 Prci-Chr6 14173991 14178467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1709 130 192 C2H2 Transcription Factor Family AT1G74250 38.806 1.42e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1709 K23051 - qsa:O6P43_001846 321.242