Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1676 ATGTTTCTGCAGAGAAACTCCATAGCTTTGCTGGTGATTCCCATTATTGCAGTTCTTGCATATTTCATTGTCATTGATGATAGTAATCCAAACAAGCAGTCGTTTATGTGCGATTTATTGTCGTCGTTCTCTTCGAGTCATCGTCGTCCTCATCACCACCACCACCACCACAAGAAACGACGACCTGATGATAGCAGCAGCGGTGATATTATTAGCAATTTATGCGATGATTTCCCGCCGGGGATTCCGCCGGAGAATACCAATACGACGACGTATCTGTGTGTGGATCGACGAGGGTGCTGCAATTTCACCACCGTGCAAGCAGCCGTAAATGCTGTCCCAGACAACAGCAATAAACGAAACATCATTTGGATTAATAGTGGCCTTTATTATGAGAAAGTGATGGTGCCTATAACCAAACCAAACATCACATTTCAAGGGCAAGGCTACACTTCAACGGCGATTGCATGGAACGACACTGCCAAGTCAGCAAACGGCACATTCTATAGCGGCTCCGTCCAAGTCTTCGCCTCCAATTTCATTGCCAAAAACATAAGCTTTATGAATGTGGCACCAATTCCAGGTCCAGGAGTGGAAGGAGCACAAGCAGTGGCAATAAGAGTTGGAGGAGATGAAGCTCAGTTCTGGGGATGTGGCTTTTTTGGAGCTCAAGATACTCTTCACGATGATAAAGGTCGCCATTACTTCAGAGATTGCTATATCCAGGGCTCTATTGATTTCATCTTTGGCAATGCAAGGTCTCTCTATGAGAATTGTCAAATAGTGTCAATGGCGAACCCAGTACCGGCAGGACAAAAGTTCATAAACGGCGCCGTTACAGCGCATGGGAGAACAACAAACGACGAAAACACGGGCTTTGCTTTTGTGAACTGTAGCATAGGAGGCTACGGAAGAATATTGTTGGGTCGGGCTTGGCGTCCTTATTCTCGTGTCGTTTTTGCTTTTACGACGATGTCTGATATCATCGCCCCCGAAGGTTGGAACGACTTCAATGACCCTGCAAGAGATCAGACAATATTCTATGGAGAATACAACTGTACAGGAGCAGGGGCTAATATGAGTTTGAGGGCACCATATGTGCGGAGATTAAATGATACAGTTGCTTCTAATTTCCTTAACACATCCTTTATTGATGGAGACCAATGGTTGTTTTTCACTCCCAATTAA 1188 0.4503 MFLQRNSIALLVIPIIAVLAYFIVIDDSNPNKQSFMCDLLSSFSSSHRRPHHHHHHHKKRRPDDSSSGDIISNLCDDFPPGIPPENTNTTTYLCVDRRGCCNFTTVQAAVNAVPDNSNKRNIIWINSGLYYEKVMVPITKPNITFQGQGYTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNVAPIPGPGVEGAQAVAIRVGGDEAQFWGCGFFGAQDTLHDDKGRHYFRDCYIQGSIDFIFGNARSLYENCQIVSMANPVPAGQKFINGAVTAHGRTTNDENTGFAFVNCSIGGYGRILLGRAWRPYSRVVFAFTTMSDIIAPEGWNDFNDPARDQTIFYGEYNCTGAGANMSLRAPYVRRLNDTVASNFLNTSFIDGDQWLFFTPN 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1676 395 FunFam Pectinesterase 87 394 - -
Prci6g1676 395 Gene3D - 86 393 IPR012334 -
Prci6g1676 395 SUPERFAMILY Pectin lyase-like 91 392 IPR011050 -
Prci6g1676 395 Pfam Pectinesterase 95 387 IPR000070 GO:0030599|GO:0042545
Prci6g1676 395 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 81 390 - -
Prci6g1676 395 ProSitePatterns Pectinesterase signature 2. 241 250 IPR033131 -
Prci6g1676 395 MobiDBLite consensus disorder prediction 48 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1676 Prci-Chr6 13872574 13878877 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1676 73 393 Carbohydrate Esterase AT1G05310 72.586 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1676 - - ahf:112696095 585.489