Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1674 ATGGAAGAAGAAACCAACACCAGCACACAAGGATGTGTCATGGATTCTCCAGCTCCGACATCGTCATCGTCTTCGTCGCCTTCTTACCGGGGAGTTCGCAAGCGAAAATGGGGCAAATGGGTGTCGGAAATTCGTGAGCCTGGCAAGAAAACTCGGATATGGTTAGGAAGCTACGAGACGCCGGAAATGGCTGCGGCGGCTTTTGATGTTGCGGCTTCACACTTCCGGGGACCGTCAGCCCGGCTTAACTTTCCGGAGTTCAGCGGGGTTTTCCCTCGGCCGGCAAGCTCCGAGGCGGAGGACGTCCGGTTCGCGGCTCAACAAGCAGCGTTGATGATCAGGAGACCGTCGAGATCAACGAGGGAGGCCGAGGGCGTTGGTGCAGCTCCGGCGACGGTGGGGCTGTCGCCGAGCCAGATTCAGGCGATCAATGAATGGCCATTGGATTCGCCGAAGATGTGGATGCAAATGGCTGAACCTCTCACGTCAGCGTTTGATGAGTCTATGGCATTACATAATAAAGATGAGGATGAATCGGAGTTTACAAGTTGGGAAGAAATACAGGATGATTCTTTATGGGACTTTTAA 588 0.5391 MEEETNTSTQGCVMDSPAPTSSSSSSPSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYETPEMAAAAFDVAASHFRGPSARLNFPEFSGVFPRPASSEAEDVRFAAQQAALMIRRPSRSTREAEGVGAAPATVGLSPSQIQAINEWPLDSPKMWMQMAEPLTSAFDESMALHNKDEDESEFTSWEEIQDDSLWDF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1674 195 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Prci6g1674 195 PRINTS Ethylene responsive element binding protein signature 51 67 IPR001471 GO:0003700|GO:0006355
Prci6g1674 195 CDD AP2 29 86 IPR001471 GO:0003700|GO:0006355
Prci6g1674 195 MobiDBLite consensus disorder prediction 180 195 - -
Prci6g1674 195 SUPERFAMILY DNA-binding domain 28 85 IPR016177 GO:0003677
Prci6g1674 195 Gene3D AP2/ERF domain 28 86 IPR036955 GO:0003700|GO:0006355
Prci6g1674 195 Pfam AP2 domain 27 77 IPR001471 GO:0003700|GO:0006355
Prci6g1674 195 MobiDBLite consensus disorder prediction 173 195 - -
Prci6g1674 195 MobiDBLite consensus disorder prediction 1 36 - -
Prci6g1674 195 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 18 157 - -
Prci6g1674 195 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
Prci6g1674 195 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
Prci6g1674 195 MobiDBLite consensus disorder prediction 1 30 - -
Prci6g1674 195 FunFam Ethylene-responsive transcription factor 2 28 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1674 Prci-Chr6 13854118 13854712 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1674 28 194 AP2-EREBP Transcription Factor Family AT1G71450 52.601 5.94e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci6g1674 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1674 - - qsu:111995063 212.231