Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1673 ATGAAGATGGAACAAGTAGCCAGCACCAACGCACAAGGATGTCTCATGGATTCTCCGGTTCCGTCGTCGTCTTACCGGGGAGCTCGCAAGCGAAAATGGGGCAAATGGGTGTCGGAAATCCGTGAGCCCGGCAAGAAAACTCGGATATGGTTAGGAAGCTATGAGACACCGGAAATGGCAGCCGCCGCATACGACGTTGCAGCTTCACACTTCCGAGGACGGTCGGCTCGACTTAACTTCCCGGACTTATCTGGAGATCTTCCACGGCCGGTGAGCTCCCGAGCAGAGGACATCCGAGTGGCAGCTCAACAAGCTGCATTAATGTTCAGGAGACCGTCGAGATGTCAATCCACGAGTGACGCCGCCAGAGGCGGCATGGTTCCGGCCACGGCAGGGCTGTCGCCGAGCCTGCAGATTCAAGCCATAAATGAGTCGCCGCCGTTGAATTCGCCGATGATGTGGATGCAAATGGCTGAAGCACTCATGTTAGGGCTTGATGATCAGTCTATAGCATTATATAACGACGACGACGACGGCTTAGAACTGAGAAGATGGGAAGAAATCCTATATGGAATTTCTAATTGA 585 0.5333 MKMEQVASTNAQGCLMDSPVPSSSYRGARKRKWGKWVSEIREPGKKTRIWLGSYETPEMAAAAYDVAASHFRGRSARLNFPDLSGDLPRPVSSRAEDIRVAAQQAALMFRRPSRCQSTSDAARGGMVPATAGLSPSLQIQAINESPPLNSPMMWMQMAEALMLGLDDQSIALYNDDDDGLELRRWEEILYGISN 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1673 194 MobiDBLite consensus disorder prediction 1 26 - -
Prci6g1673 194 FunFam Ethylene-responsive transcription factor 2 23 82 - -
Prci6g1673 194 CDD AP2 23 83 IPR001471 GO:0003700|GO:0006355
Prci6g1673 194 Gene3D AP2/ERF domain 24 82 IPR036955 GO:0003700|GO:0006355
Prci6g1673 194 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Prci6g1673 194 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Prci6g1673 194 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Prci6g1673 194 SUPERFAMILY DNA-binding domain 23 82 IPR016177 GO:0003677
Prci6g1673 194 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Prci6g1673 194 MobiDBLite consensus disorder prediction 1 19 - -
Prci6g1673 194 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 22 123 - -
Prci6g1673 194 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1673 Prci-Chr6 13850106 13850782 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1673 23 156 AP2-EREBP Transcription Factor Family AT1G71450 55.245 1.72e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci6g1673 AP2 5.2e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1673 - - gmx:100788567 213.386