Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1664 ATGAGTTGCAGCTCCGGCGACAACAATGGAAGCAGCAGCAATAGCAGGGACGGTGCCGTCAAGTACAAGGGAGTCCGGCGACGGAAATGGGGCAAGTGGGTGTCGGAGATTCGAGTCCCGGGGTCGCAGGAGCGTCTGTGGCTGGGCACGTTTGCCTCGCCGGAGGCGGCAGCGGTGGCTCGTGACGTGGCTTACTACTGTCTGAGGAGACCGGCGTCGTTGGAGAAGCTCAACCTCCCGGAGATGCTGCCTCCCTGTTATGTCTGGCAGCAGAGGGAGATGTCGCCGAGGTCGGTGCAGGCGGCGGCGTCAAATGCCGGCATGGCCGTCGATGCGCAGAGGATTGTTGAAGCAGAAGGGAAGATTGAGAGGACTGATAATGAGCAGAGAGAAAACAGAGAGATGAATGACGAGTTCTGGTGGGACTGGGACGACGACGGCAACGCCCGTGCCGGCTCCGGCGGTATATGGGAAGGCATCAGTGATGGGTACACACAAGGAGAAGCATCGAGCATTTCAATTGATGATTATTTTATCGATCTTCAATAG 549 0.5774 MSCSSGDNNGSSSNSRDGAVKYKGVRRRKWGKWVSEIRVPGSQERLWLGTFASPEAAAVARDVAYYCLRRPASLEKLNLPEMLPPCYVWQQREMSPRSVQAAASNAGMAVDAQRIVEAEGKIERTDNEQRENREMNDEFWWDWDDDGNARAGSGGIWEGISDGYTQGEASSISIDDYFIDLQ 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1664 182 CDD AP2 21 81 IPR001471 GO:0003700|GO:0006355
Prci6g1664 182 MobiDBLite consensus disorder prediction 1 20 - -
Prci6g1664 182 Pfam AP2 domain 21 69 IPR001471 GO:0003700|GO:0006355
Prci6g1664 182 SUPERFAMILY DNA-binding domain 21 72 IPR016177 GO:0003677
Prci6g1664 182 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Prci6g1664 182 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Prci6g1664 182 SMART rav1_2 21 86 IPR001471 GO:0003700|GO:0006355
Prci6g1664 182 Gene3D AP2/ERF domain 20 81 IPR036955 GO:0003700|GO:0006355
Prci6g1664 182 ProSiteProfiles AP2/ERF domain profile. 21 80 IPR001471 GO:0003700|GO:0006355
Prci6g1664 182 MobiDBLite consensus disorder prediction 1 18 - -
Prci6g1664 182 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1664 Prci-Chr6 13770984 13771700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1664 21 112 AP2-EREBP Transcription Factor Family AT1G22810 66.304 2.84e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci6g1664 AP2 1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1664 - - pcin:129313911 253.447