Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1663 ATGGTGTTGTTCATATCAAATCATTCAAATGAGTGTGATCCCAATTTAGACACGTTTAGCACTGAACAGCCTCAAAGGGGTCAACCATTTGGAGGCGAAGAAAATAAAGATTGTTGGAGATTTGAGTACAAGGGAGTCCGGCGACGGAAATGGGGCAAGTGGGTGTCGGAGATTCGAGTCCCGGGGTCGCAGGAGCGTCTGTGGCTGGGCACGTTTGCCTCGCCGGAGGCGGCAGCGGTGGCTCGTGACGTGGCTTACTACTGTCTGAGGAGACCGGCGTCGTTGGAGAAGCTCAACCTCCCGGAGATGCTGCCTCCCTGTTATATCTGGCAGCAGAGGGAGATGTCGCCGAGGTCGGTGCAGGCGGCGGCGTCGAATGCCGGCATGGCCGTCGATGCGCAGAGGATTGTTGAAGCAGAAGGGAAGATTGAGAGGACAGATAATGAGCAGAGAGAAAACAGAGAGATGAATGACGAGTTCTGGTGGACTAGAACGACGACGACAACGCCGGCGCAGGTACCGGCGGTATATGGGAGGGCATCAGTGATGGGTACACACAAGGAGAAGCATCGAGCATTTCAATCGATGATTATTTTATCGATCTTCAATAGTCTTAGAAGTTCAGGGATTTAA 633 0.5276 MVLFISNHSNECDPNLDTFSTEQPQRGQPFGGEENKDCWRFEYKGVRRRKWGKWVSEIRVPGSQERLWLGTFASPEAAAVARDVAYYCLRRPASLEKLNLPEMLPPCYIWQQREMSPRSVQAAASNAGMAVDAQRIVEAEGKIERTDNEQRENREMNDEFWWTRTTTTTPAQVPAVYGRASVMGTHKEKHRAFQSMIILSIFNSLRSSGI 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1663 210 Pfam AP2 domain 43 90 IPR001471 GO:0003700|GO:0006355
Prci6g1663 210 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Prci6g1663 210 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Prci6g1663 210 ProSiteProfiles AP2/ERF domain profile. 42 101 IPR001471 GO:0003700|GO:0006355
Prci6g1663 210 Gene3D AP2/ERF domain 42 102 IPR036955 GO:0003700|GO:0006355
Prci6g1663 210 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 23 149 - -
Prci6g1663 210 SMART rav1_2 42 107 IPR001471 GO:0003700|GO:0006355
Prci6g1663 210 SUPERFAMILY DNA-binding domain 43 93 IPR016177 GO:0003677
Prci6g1663 210 CDD AP2 43 102 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1663 Prci-Chr6 13761925 13763698 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1663 42 133 AP2-EREBP Transcription Factor Family AT1G22810 64.130 5.19e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci6g1663 AP2 4e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1663 - - pcin:129313911 418.698