Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1637 ATGGGGACACGACCTCAGCAACCATGTCGAGAGGAAGAGGAGGATGAGCTGCTAGGTCGTGGAACAACACTTTCTGGCCAATCAATTTCCACGAGTAAAAGTGTAGGGTCACCATCCAGTCGGAGTGAGCAGACAATGGCTACGCCGGCTAGTGATAACACTTTTCTAAGACTTAATCATCTCGACATCCATGGTGATGATGCTGGATCCCAGGGAGCAGTTGCAAGCAAGAAGAAAAAGAGAGGCCAGCGTGCTGTCGGAGGTGACAAGAGTGGAAGGGGGCTTCGCCAATTTAGCATGAAAGTATGTGAAAAGGTGGAAAGTAAGGGAAGAACCACTTACAATGAGGTTGCAGATGAACTTGTGGCTGAATTTGCTGACCCAAGCAGTAGTGTTTCAACTCCTGATCAGCAACAATATGATGAGAAAAACATTCGTCGAAGGGTTTATGATGCTTTGAATGTTCTCATGGCAATGGATATAATTTCCAAGGATAAAAAGGAAATTCAATGGAAGGGTCTCCCTCGTACAAGTCTGAATGATATTGAAGAATTAAAGTCGGAGCGTCTTCAGCTTAGGAATCGGATTGAAAAGAAAGCTGCCTACCTGCAAGAGCTGGAGGAGCAATACATAGGTCTTCAGAATCTCATACAACGAAATGAGCAATTATATGGCTCAGGAAATGCTCCCAGTGGAGGTGTAGCCTTACCTTTTATTCTTGTACAGACTCGTCCCCATGCAACTGTTGAAGTGGAAATATCAGAAGATATGCAGCTTGTACATTTTGATTTCAACAGCACCCCTTTTGAGCTACATGATGACAACTATGTCCTCAAGGCAATGAAATTTTGTGAGAGACCACAGAATGATAATATGACACAAAATCTTGCCGACGGCGGTGAAGGTTCTAGCATGTCAGGCTTGTATCAGGCGCAGGTCACTCCGTCAGTTTCAAACCAACCGGTTAGAACTCCGACCTCGCCACCTCTCCCTGGAATCTTGAAGGCAAGAGTTAAGCACGAGCATTGA 1029 0.4519 MGTRPQQPCREEEEDELLGRGTTLSGQSISTSKSVGSPSSRSEQTMATPASDNTFLRLNHLDIHGDDAGSQGAVASKKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSSSVSTPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKSERLQLRNRIEKKAAYLQELEEQYIGLQNLIQRNEQLYGSGNAPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCERPQNDNMTQNLADGGEGSSMSGLYQAQVTPSVSNQPVRTPTSPPLPGILKARVKHEH 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1637 342 Pfam Transcription factor DP 181 295 IPR014889 -
Prci6g1637 342 SUPERFAMILY "Winged helix" DNA-binding domain 93 174 IPR036390 -
Prci6g1637 342 FunFam Transcription factor-like protein DPB 85 178 - -
Prci6g1637 342 FunFam Transcription factor-like protein DPB 179 303 - -
Prci6g1637 342 MobiDBLite consensus disorder prediction 314 342 - -
Prci6g1637 342 MobiDBLite consensus disorder prediction 1 93 - -
Prci6g1637 342 SMART DP_2 180 340 IPR014889 -
Prci6g1637 342 Gene3D Transcription factor DP 179 302 IPR038168 -
Prci6g1637 342 Pfam E2F/DP family winged-helix DNA-binding domain 93 173 IPR003316 GO:0005667|GO:0006355
Prci6g1637 342 Gene3D - 85 178 IPR036388 -
Prci6g1637 342 Coils Coil 182 223 - -
Prci6g1637 342 SUPERFAMILY E2F-DP heterodimerization region 179 294 IPR037241 -
Prci6g1637 342 PANTHER TRANSCRIPTION FACTOR DP 23 320 IPR015648 GO:0005667|GO:0051726
Prci6g1637 342 MobiDBLite consensus disorder prediction 21 55 - -
Prci6g1637 342 CDD DP_DD 178 281 IPR014889 -
Prci6g1637 342 PIRSF Txn_factor_DP 5 342 IPR015648 GO:0005667|GO:0051726
Prci6g1637 342 SMART E2F_TDP_2 90 173 IPR003316 GO:0005667|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1637 Prci-Chr6 13402290 13410690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1637 91 289 E2F-DP Transcription Factor Family AT5G02470 55.500 7.73e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Prci6g1637 DP 1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1637 K04683 - zju:107414839 593.193