Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1622 ATGGTTACCAGGATTTGCAATCAAAACCATCTGTTTGGTGATGTTATTGAAATTGCTAGACTCTTCCTTGAAAGAAATCGGACTATTTCTTTTGATTTCATATACAGGGAAGCAAACATTTGTGCTCACTTATTAGCACAATTATCTCATTACTGGATTAGTGTTGATTTTTATACCTATGTCCATCCTCCACCTCTTTATCAGAAGTTGCCAGTCTTCACATTCTACTTGGAACTCATCAGGGATTTGCTTCACTTGTCTATGTATATGTGTTTCTTCCTCGTGATTTTCATAAATTATGGTGTGCCTTTACACTTAATATGGGAGCTGTATGAGACATTTAGGAACTTCAAAGTTCATGTTGCTGACTACATACGCTATCGTAAGATTACTTCAAATATGAATGATCGGTTTTCAGATGCAACCCCTGAAGAGCTTAACGCAAGCGATGCTACATATATTATCTGTCGTGAAGAGATGACTACAGCCAAGAAGCTTATATGTGGACATCTTTTTCATGTGCATTGCCTCCGATCATGGTTAGAGGGGCAACATACTTGCCCTACCTGCAGAGCCTTGGTTGTACCGCCTGAAAATGGCGCAACTACTGCTGGAGGGCAGCATGGATCACAGTCAGATCGACAGGGAACAAGAACGGGAACTAGTACTGGAAACTCATCTCAAGCTGAAGGTGGCAATGGGGTGGCTACTGATAATTTGAGTCGTCATCAAGTTAGACTCCAAACTACCGCTGCCTCAATGTATGAGAAGTCTTACGTATACCCATCACCATCTGCAACTTCTTTAGTATGGTATATCAGTGATTTACCATCCACCTTTCTTTATATACTTAAACAGACTGATCCAGAAACAATGAATTTAACTGAAGACACATTGTGTGCTTGGGTTGTTCTTGTTGAAAAATAG 927 0.4002 MVTRICNQNHLFGDVIEIARLFLERNRTISFDFIYREANICAHLLAQLSHYWISVDFYTYVHPPPLYQKLPVFTFYLELIRDLLHLSMYMCFFLVIFINYGVPLHLIWELYETFRNFKVHVADYIRYRKITSNMNDRFSDATPEELNASDATYIICREEMTTAKKLICGHLFHVHCLRSWLEGQHTCPTCRALVVPPENGATTAGGQHGSQSDRQGTRTGTSTGNSSQAEGGNGVATDNLSRHQVRLQTTAASMYEKSYVYPSPSATSLVWYISDLPSTFLYILKQTDPETMNLTEDTLCAWVVLVEK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1622 308 Pfam Ring finger domain 155 191 IPR001841 -
Prci6g1622 308 SUPERFAMILY RING/U-box 133 197 - -
Prci6g1622 308 ProSiteProfiles Zinc finger RING-type profile. 155 191 IPR001841 -
Prci6g1622 308 CDD RING-H2_synoviolin 150 191 - -
Prci6g1622 308 MobiDBLite consensus disorder prediction 203 241 - -
Prci6g1622 308 MobiDBLite consensus disorder prediction 201 241 - -
Prci6g1622 308 FunFam ERAD-associated E3 ubiquitin-protein ligase HRD1A 125 200 - -
Prci6g1622 308 PANTHER RING ZINC FINGER PROTEIN 28 244 - -
Prci6g1622 308 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 198 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1622 Prci-Chr6 13219181 13224509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1622 67 279 C3H Transcription Factor Family AT1G65040 65.753 3.26e-98 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1622 K10601 - cave:132166990 320.857