Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1601 ATGAAGCTCTCTTTCTCTGTGCAATCAAAATCCAACTCCAAGTCAAACCCCATCAAGCCCTCCAACAAATTCGACGCGGCCGCCGCCGATATTCAAGATGGGAACTCCAAGGCCAGAGAGTATGTTACAGAGTTCGATGCATCGAAAGCCCCTTCTGATCCTAACAAATCTACCAACATGGTTATTCCCCCTATAGAGAACGAATGGAATATAGAGAGGTCCCACAAGAGAATGAAGAATCTAGACTTACCCATCACTGAATCTAATGGAACCGAGTTGGGGTTTGAGCTGGATACGTCGGCAGTTGTGGAACCCGGTGCGGACATGTCTTATGGTTTGAATCTTAGGCTGACGAAGAATGATGGAGACGGGGGAAAACCTGCCGATGGCAGTGGCGGTGACGGTGATCATGACGGAAGGTCGCGACCCGTTTCTCTGGACTCTGTGGTGCTGCAGAAATTTAAGGACGATATGAAGAGGTTACCGGACCATAGAGGCTTCGAGGAGTTCAAAGATGTCCCTGTTGAGGGTTTTGGTGCAGCTTTGCTTGCGGGGTATGGATGGCGTGAAGGAATGGGAATCGGAAAGAATGCGAAGGAGGATGTGAAAGTTGTACAGTATGAGAGGAGGACTGCCAAAGAAGGGTTGGGTTTTGTTGCTGATCATGCTCGTAAGTGGAGTTCGAAAGATGAAGTGAAGATGCCTAAGGAGCATGGTGGACATGAAATGAAGGTGCCTAAGGAGCATGGTAGACATAGTTCCTTCTTGGGAAAGGTTGTTAGAATAGTTGAGGGCAGAAATGCAGGTCTGAAGGGTAAAATTGTACGAGAGGTTGAAGATAAATGGGTTATTTTAAAACTTTCCAAGAGTGAAGAGGAAGTAAAAGTGAGCCTCGGCGATTTTGTAGAGTTGGGTTCTATTGAAGAAGAGAGGTTTTTGAAGAAATTGAAGGAGTTAAAGATTCAAGATGCTGATAAAGATAGAGATCGAGATTCAAGGAATAAACGCGGTAGAGATGAAGGAAGGAGAGGCCGTGATGAGGTTGCAGTTGATGTTAAAAGAGATAGTAGGAAGGAAGGGCAGGGGAAGAAACAAGTTTCGTGGCTTACAAGTCATATTCGTGTCAGGGTTATTAGCAAAGATTTCAAAGGAGGGCGATTATATTTGAAGAAGGGGCAGGTATTGGACGTTGTTGGGCCTGCTACTTGTGATATATCTATGGATGATGGCAAGGAAATCATCCAGGGGATTTCCCAAGACGTTCTTGAGACTGCTATCCCTCGCCGAGGGGGGCCAGTTCTTGTATTATATGGTAAACATAAAGGCGTTTATGGGAGTCTGGTTGAGAAAGATTCGGACAAAGAAATTGCTGTTGTTAGAGATGCCGATACCCATGCACTGATCAATGTGCGGCTTGAACAAATTGCAGAGTTTACAGGGGATCCAAGTATCCTGGGATACTGA 1464 0.457 MKLSFSVQSKSNSKSNPIKPSNKFDAAAADIQDGNSKAREYVTEFDASKAPSDPNKSTNMVIPPIENEWNIERSHKRMKNLDLPITESNGTELGFELDTSAVVEPGADMSYGLNLRLTKNDGDGGKPADGSGGDGDHDGRSRPVSLDSVVLQKFKDDMKRLPDHRGFEEFKDVPVEGFGAALLAGYGWREGMGIGKNAKEDVKVVQYERRTAKEGLGFVADHARKWSSKDEVKMPKEHGGHEMKVPKEHGRHSSFLGKVVRIVEGRNAGLKGKIVREVEDKWVILKLSKSEEEVKVSLGDFVELGSIEEERFLKKLKELKIQDADKDRDRDSRNKRGRDEGRRGRDEVAVDVKRDSRKEGQGKKQVSWLTSHIRVRVISKDFKGGRLYLKKGQVLDVVGPATCDISMDDGKEIIQGISQDVLETAIPRRGGPVLVLYGKHKGVYGSLVEKDSDKEIAVVRDADTHALINVRLEQIAEFTGDPSILGY 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1601 487 ProSiteProfiles G-patch domain profile. 175 221 IPR000467 GO:0003676
Prci6g1601 487 MobiDBLite consensus disorder prediction 1 31 - -
Prci6g1601 487 MobiDBLite consensus disorder prediction 1 20 - -
Prci6g1601 487 Gene3D - 372 426 - -
Prci6g1601 487 SMART kow_9 426 453 IPR005824 -
Prci6g1601 487 SMART kow_9 253 280 IPR005824 -
Prci6g1601 487 MobiDBLite consensus disorder prediction 229 250 - -
Prci6g1601 487 Pfam G-patch domain 162 219 IPR026822 -
Prci6g1601 487 MobiDBLite consensus disorder prediction 323 362 - -
Prci6g1601 487 MobiDBLite consensus disorder prediction 118 147 - -
Prci6g1601 487 MobiDBLite consensus disorder prediction 323 363 - -
Prci6g1601 487 PANTHER G PATCH AND KOW-CONTAINING 1 483 IPR045166 GO:0000398
Prci6g1601 487 SMART G-patch_5 173 219 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1601 Prci-Chr6 12953079 12957028 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1601 368 460 C2H2 Transcription Factor Family AT1G55460 33.333 2.34e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1601 K13101 - qsa:O6P43_026128 532.717