Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1590 ATGATGGATGGAGTTCATGGCAGTGCGGCGAGTTCCGCGGCGGCAAATATGAATTCTCCGCCGCCATTCCTCAGCAAGACCTATGACATGGTCGACGATCCTTCCACAAACTCGGTGGTCTCATGGACTGAAAATAACAACAGCTTTGTTGTTTGGGATGTGCCCGAATTCGCTAGGGACATCTTGCCCAAGTATTTTAAGCACAACAATTTCTCCAGCTTCGTCAGGCAATTGAATACTTACGGTTTTAGAAAAGTCGACCCAGACCGCTGGGAATTTGCAAATGAGGGATTTTTAAGGGGTCAGAAACAACTTTTGAAGAGTATCAGTAGGAGGAAGCCTACTCAAGTGAATGGTAATCAACAGCCATCTCCAGCACAGAACAAACCTGTTGGGGCATGTATTGAGGTTGGAAAGTTTGGGCTTGAGGAAGAGGTTGAACAATTGAAAAGGGATAAGAATGTTCTTATGCAAGAACTTGTCAGGCTGAGACAACAGCAGCAAGCAACTGATAACCAGTTGCAAGGTGTTGGGCAACGTGTGCAGGTTATGGAGCAGCGTCAGCAACAAATGATGTCATTTCTTGCAAAGGCCATGCAAAACCCTGGATTCTTGGCACAGTTTGTACAGCAGCAGAGTGACAGTAACAGACATATTACTGGAGGCAATAAAAAGAGGAGGCTCCACAGACAGGAAGAAGATGCACTAGCCTCTGAGCATCTCTATAATGCTGTTGATGGACGTGTTATTAAATATCAACCTTCTATGAATGAGGCTGCAAAAGCATTATTGCGCCAGATATTGCAAATGAATGCTTCTTCAAGGAGGGAAACATCAATAAGTAACCCTGATGCTTTTCTCATTGATGATGCTCCTTCTGCCATTGCATTAGATAGTGGGAGTTCCTCTAGTCGGGCTTCAGGAGTGACACTTTCTGAGGTTCCGCCCACTTCTTGCCAGTCTTATATGGCAGGGCAATCACAATTGCCTGTTAATCGTGTTCCGGAGATGCAATCTTCCAGTGCTATGTTGACTGACCCTGCTAAAGTAGCTGAATTCCCGGGATTAAATTTGCATAATTGCCCAGAGAATTTTTTGGGTATTGGTGAAGTCCAAACAGAGAGCAGTTTAGTGAATCCTGACCTCGCTTTTGGGGGGCCTGACACTGGGAATGCAGGGGATATAGACATGATGTCAGCAGTTTTGGATGGGACAGAGTCTGTAGATGTAGAAGCTGATGCCTTTTCACCTGATCCAGATGGAATTTCAAAGCTCCCAAGCATTAGTGATGTTTTCTGGGAACAGTTTTTCACAGCAAGTCCGCTTACGGGTGATACAGATGAAATTAGTTCTCCCTCTCTTGGAGATGGTTTGACCGAGGAAGGGGAACCTCCATCTAGAAAGGAGAATGGACAGGAAATGTTGGATAAGATAAAACATATTGATCATCTTACTCAACAGATGGAACTTCTAGCTTCCAGCACTTCGTAA 1491 0.448 MMDGVHGSAASSAAANMNSPPPFLSKTYDMVDDPSTNSVVSWTENNNSFVVWDVPEFARDILPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKQLLKSISRRKPTQVNGNQQPSPAQNKPVGACIEVGKFGLEEEVEQLKRDKNVLMQELVRLRQQQQATDNQLQGVGQRVQVMEQRQQQMMSFLAKAMQNPGFLAQFVQQQSDSNRHITGGNKKRRLHRQEEDALASEHLYNAVDGRVIKYQPSMNEAAKALLRQILQMNASSRRETSISNPDAFLIDDAPSAIALDSGSSSSRASGVTLSEVPPTSCQSYMAGQSQLPVNRVPEMQSSSAMLTDPAKVAEFPGLNLHNCPENFLGIGEVQTESSLVNPDLAFGGPDTGNAGDIDMMSAVLDGTESVDVEADAFSPDPDGISKLPSISDVFWEQFFTASPLTGDTDEISSPSLGDGLTEEGEPPSRKENGQEMLDKIKHIDHLTQQMELLASSTS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1590 496 FunFam Heat shock transcription factor 1 16 113 - -
Prci6g1590 496 SUPERFAMILY "Winged helix" DNA-binding domain 18 112 IPR036390 -
Prci6g1590 496 Gene3D - 15 113 IPR036388 -
Prci6g1590 496 SMART hsfneu3 19 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci6g1590 496 ProSitePatterns HSF-type DNA-binding domain signature. 62 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci6g1590 496 Pfam HSF-type DNA-binding 23 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci6g1590 496 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 15 317 IPR027725 -
Prci6g1590 496 PRINTS Heat shock factor (HSF) domain signature 23 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci6g1590 496 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci6g1590 496 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci6g1590 496 Coils Coil 139 166 - -
Prci6g1590 496 MobiDBLite consensus disorder prediction 442 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1590 Prci-Chr6 12796720 12802824 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1590 17 493 HSF AT5G16820 54.361 4.58e-159 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Prci6g1590 HSF_DNA-bind 5e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1590 K09419 - qsa:O6P43_001765 605.134