Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1532 ATGGGATTCCTACATGCTAATTATCCTCAAGTACTAGGCCAGGAAGGCATTGGTGTTGTGGAGTGCATTGGGGAGGAAGGGAAGAACGTAAAGGCAGGGGATGTGGTGATTCCGTTGTACTTAGGAGAGTGCCAAGACTGTGAGGAATGCATAAAAGGGAAGACCAACCTGTGGAGGACATACCCTATAAGGTTGACTGGGTTGATGCCAGACAGTACTTCTAGAATGTCTGTGAGAGGTCACAAGGCATATCATCTTATGAGTTGTGCCACATGGTGTGAGTACATGGTGGTTGATGCTAACTATGTTCTCAAAGTGGACCCAACAACCATTGATGCTGCTCATGGCAGCTTCATCTCTTGTGGCTTCTCAACTGGTTTTGGAGCTGCTTGGAAAGAAGCCACGGTTGAACAAGGATCTAGTGTTGCTGTTTTTGGTCTTGGTGCTGTTGGGTTAGGGACTGTAAGTGGACCGAAATTGATGGGAGCAACAAAGATAATTGGGATTGACAAAAATGAGAACAAGAGAGAAAAAGGAGAAGCTTTTGGGATGACAGAGTTTATAAATCCTGACAAGTTATTGTCAGATCAAACTGTTTCACAAGCAGTCAAAGAACTAAGTGGTGGAATGGGTGTGGATTATTCCATTGAGTGCACTGGAGCTCCTTCTTTGCTCAATCAAGCCGTGGAATCCACTAAAGTGGGAGTGGGCAAGACAGTGGTAGTAGGTACAGGAGCTGAATCTGTGCAGCTAAATTATCGTATCTTTATGTATGGAAGATCATTGAAGGGTTCTGTATTTGGAGGCATCAAACCCGTTTCTGATCTTCCTTTTATAGCTCACAAGTGTCACACAAGGGAAATTCCAATTCATGAACTTTTTACCCATGAGGTCCACTTGGAAGATATAAGCAAAGCATTTGAGATAATGAGATATCCAGACTGTGTCAAAGTTGTGATCAAGATGTGA 969 0.4355 MGFLHANYPQVLGQEGIGVVECIGEEGKNVKAGDVVIPLYLGECQDCEECIKGKTNLWRTYPIRLTGLMPDSTSRMSVRGHKAYHLMSCATWCEYMVVDANYVLKVDPTTIDAAHGSFISCGFSTGFGAAWKEATVEQGSSVAVFGLGAVGLGTVSGPKLMGATKIIGIDKNENKREKGEAFGMTEFINPDKLLSDQTVSQAVKELSGGMGVDYSIECTGAPSLLNQAVESTKVGVGKTVVVGTGAESVQLNYRIFMYGRSLKGSVFGGIKPVSDLPFIAHKCHTREIPIHELFTHEVHLEDISKAFEIMRYPDCVKVVIKM 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1532 322 Pfam Alcohol dehydrogenase GroES-like domain 5 106 IPR013154 -
Prci6g1532 322 Pfam Zinc-binding dehydrogenase 149 269 IPR013149 -
Prci6g1532 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 112 281 IPR036291 -
Prci6g1532 322 PANTHER ALCOHOL DEHYDROGENASE 6 312 - -
Prci6g1532 322 FunFam S-(hydroxymethyl)glutathione dehydrogenase 126 265 - -
Prci6g1532 322 Gene3D - 126 265 - -
Prci6g1532 322 SUPERFAMILY GroES-like 6 143 IPR011032 -
Prci6g1532 322 Gene3D - 6 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1532 Prci-Chr6 12155828 12161293 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1532 6 314 Monolignol Biosynthesis Gene Families AT2G21730 25.240 8.01e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1532 K00121 - gmx:100798341 414.075