Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1525 ATGCTTTGTGCAAGTGTTTGCCACACAGACCTCTTCGCCACTATGGGATTCGTACATGCTAATTATCCTCAAGTACTCGGCCACGAAGGCATTGGTGTTGTGGAGAGCATTGGGGAGGAAGTGAAGAACGTAAAGGTAGGGGATGTAGTGATTCCATTGTACTTAGGAGAGTGTCAAGAATGTGAGGAATGCATAAAAGGGAAGACCAACCTATGTAGGACATATCCTATAAGGTTGACTGGGTTGATGCCAGACAATACTTCTAGAATGTCTGTGAGAGGTCACAAGGCATATCATCTAATGAGTTGTGCCACATGGTGTGAGTACATGGTGGTTGATGCTAACTATGTTCTCAAAGTCGACCCAACAACCATTGATGCTGCTCATGGCAGCTTCATCTCTTGTGGCTTCTCTACTGGTTTTGGAGCTGCTTGGAAAGAAGCCATGGTTGAACAAGGATCGAGTGTTGCTGTTTTTGGTCTTGGTGCTGTGGGGTTAGGGGCTGTAAGTGGAGCGAAATTGATGGGAGCAACAAAGATAATTGGGATTGACAAAAATGAGAAGAAGAGAGAAAAAGGAGAAGCTTTTGGGATGACAGAGTTTATAAATCCTGACAAGTTATTATCAGATCAAACTGTATCTCAAGCAGTCAAAGAACTAAGTGGTGGAATGGGTGTGGATTATTCCATTGAGTGCACTGGAGCTCCTCTTTTGCTCAATCAAGCCATGGAATCCACTAAAGTGGGAGTGGGCAAGACAGTGGTAGTAGGTACAGGAGCTGAATCTGTGCAGCTAAATTGTCGTACCTTTATGTATGGAAGATCATTGAAGGGTTCTGTATTTGGAGGCATCAAACCCATTTCTGATCTTCCTTTTATAGCGCACAAGTGTCACACAAAGGAAATTCCAATTCATGAACTTTTTACCCATGAGGTCCACTTGGAAGATATAGGCAAAGCATTTGAGCTAATGAGACATCCAGACTGTGTCAAAGTTGTGATCAAGATGTGA 1011 0.4332 MLCASVCHTDLFATMGFVHANYPQVLGHEGIGVVESIGEEVKNVKVGDVVIPLYLGECQECEECIKGKTNLCRTYPIRLTGLMPDNTSRMSVRGHKAYHLMSCATWCEYMVVDANYVLKVDPTTIDAAHGSFISCGFSTGFGAAWKEAMVEQGSSVAVFGLGAVGLGAVSGAKLMGATKIIGIDKNEKKREKGEAFGMTEFINPDKLLSDQTVSQAVKELSGGMGVDYSIECTGAPLLLNQAMESTKVGVGKTVVVGTGAESVQLNCRTFMYGRSLKGSVFGGIKPISDLPFIAHKCHTKEIPIHELFTHEVHLEDIGKAFELMRHPDCVKVVIKM 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1525 336 SUPERFAMILY GroES-like 287 334 IPR011032 -
Prci6g1525 336 Gene3D - 140 279 - -
Prci6g1525 336 Gene3D - 1 331 - -
Prci6g1525 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 126 296 IPR036291 -
Prci6g1525 336 PANTHER ALCOHOL DEHYDROGENASE 1 328 - -
Prci6g1525 336 SUPERFAMILY GroES-like 2 159 IPR011032 -
Prci6g1525 336 Pfam Zinc-binding dehydrogenase 163 283 IPR013149 -
Prci6g1525 336 Pfam Alcohol dehydrogenase GroES-like domain 3 120 IPR013154 -
Prci6g1525 336 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 27 41 IPR002328 GO:0008270|GO:0016491
Prci6g1525 336 FunFam S-(hydroxymethyl)glutathione dehydrogenase 140 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1525 Prci-Chr6 12087250 12092800 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1525 1 328 Monolignol Biosynthesis Gene Families AT2G21730 27.463 5.92e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1525 K00121 - gmx:100798341 446.432