Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1524 ATGAGTGCCTCATCGAAGGTTATAACCTGCAAAGGTGCAGTATGTTGGGGAATAGGAGAGGGAGTGAAGGTAGAGGAGATACAAGTAGACCCTCCTAGGGCTTCTGAAATTCGTGTTAAGATGCTTTGTGCAAGTGTTTGCCACACAGACCTCTTCGCCACTATGGGATTCGTACATGCTAATTATCCTCAAGTACTCGGCCACGAAGGCATTGGTGTTGTGGAGAGCATTGGGGAGGAAGTGAAGAACGTAAAGGTAGGGGATGTAGTGATTCCATTGTACTTAGGAGAGTGTCAAGAATGTGAGGAATGCATAAAAGGGAAGACCAACCTATGTAGGACATATCCTATAAGGTTGACTGGGTTGATGCCAGACAATACTTCTAGAATGTCTGTGAGAGGTCACAAGGCATATCATCTAATGAGTTGTGCCACATGGTGTGAGTACATGGTGGTTGATGCTAACTATGTTCTCAAAGTCGACCCAACAACCATTGATGCTGCTCATGGCAGCTTCATCTCTTGTGGCTTCTCTACTGGTTTTGGAGCTGCTTGGAAAGAAGCCATGGTTGAACAAGGATCGAGTGTTGCTGTTTTTGGTCTTGGTGCTGTGGGGTTAGGGGCTGTAAGTGGAGCGAAATTGATGGGAGCAACAAAGATAATTGGGATTGACAAAAATGAGAAGAAGAGAGAAAAAGGAGAAGCTTTTGGGATGACAGAGTTTATAAATCCTGACAAGTTATTATCAGATCAAACTGTATCTCAAGCAGTCAAAGAACTAAGTGGTGGAATGGGTGTGGATTATTCCATTGAGTGCACTGGAGCTCCTCTTTTGCTCAATCAAGCCATGGAATCCACTAAAGTGGGAGTGGGCAAGACAGTGGTAGTAGGTACAGGAGCTGAATCTGTGCAGCTAAATTGTCGTACCTTTATGTATGGAAGATCATTGAAGGGTTCTGTATTTGGAGGCATCAAACCCATTTCTGATCTTCCTTTTATAGCGCACAAGTGTCACACAAAGGAAATTCCAATTCATGAACTTTTTACCCATGAGGTCCACTTGGAAGATATAGGCAAAGCATTTGAGCTAATGAGACATCCAGACTGTGTCAAAGTTGTGATCAAGATGTGA 1131 0.4368 MSASSKVITCKGAVCWGIGEGVKVEEIQVDPPRASEIRVKMLCASVCHTDLFATMGFVHANYPQVLGHEGIGVVESIGEEVKNVKVGDVVIPLYLGECQECEECIKGKTNLCRTYPIRLTGLMPDNTSRMSVRGHKAYHLMSCATWCEYMVVDANYVLKVDPTTIDAAHGSFISCGFSTGFGAAWKEAMVEQGSSVAVFGLGAVGLGAVSGAKLMGATKIIGIDKNEKKREKGEAFGMTEFINPDKLLSDQTVSQAVKELSGGMGVDYSIECTGAPLLLNQAMESTKVGVGKTVVVGTGAESVQLNCRTFMYGRSLKGSVFGGIKPISDLPFIAHKCHTKEIPIHELFTHEVHLEDIGKAFELMRHPDCVKVVIKM 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1524 376 FunFam alcohol dehydrogenase 1-like isoform X1 18 179 - -
Prci6g1524 376 SUPERFAMILY GroES-like 4 164 IPR011032 -
Prci6g1524 376 SUPERFAMILY GroES-like 327 374 IPR011032 -
Prci6g1524 376 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 319 - -
Prci6g1524 376 Gene3D - 14 371 - -
Prci6g1524 376 Pfam Zinc-binding dehydrogenase 203 323 IPR013149 -
Prci6g1524 376 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Prci6g1524 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 336 IPR036291 -
Prci6g1524 376 CDD liver_alcohol_DH_like 8 375 - -
Prci6g1524 376 Gene3D - 180 319 - -
Prci6g1524 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Prci6g1524 376 PANTHER ALCOHOL DEHYDROGENASE 6 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1524 Prci-Chr6 12087250 12092807 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1524 35 368 Monolignol Biosynthesis Gene Families AT2G21730 27.566 1.92e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1524 K00121 - gmx:100798341 503.056