Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1521 ATGGGGTTGAGAACGCTGGTTTTGAGAGTGGCTTTAGTGGCGTGCACACTGGGCGCAGCAGCCGCCCAATTGAAAGCGCGTTGCGACAGCAAGTGCGGGAACGTGAGCATCCCGTATCCCTTCGGCACAAGAGAAGGCTGCTTCAGAGATCCTTCTTTCCTCATAACCTGCAACTCTTCCTCCGGATTCCCCATTCCCTATCTGAGAAAAGGCAACATCCGAGTTCTCAACATCTCCCTGCACCCTGCAGAGATGCGCGTCTCTACTCTCGTCCCTTATGACTGCTATTATCCCAACGGAACCAATCATCGGCGAAAGAGTACTCTGACCCTTAAGAAGTTTGCCATATCCAATACCAAGAACAAATTCTACGTGGTCGGCTGTGACACCTACGCGTGCCTAATTGGAAACGACTTTGCAACTGGCTGCGTCTCCGTTTGCAGTAACTTGACGCACATGACGAACGGATCCTGTTCTGGCGTTGGCTGCTGCACGACCACTTTCCCCCAAGCCATTCGGAATTTCAATCTCAGTATTGGTAGCTATGAAAACCACACACACGTGCTGGCCTTCAATCCTTGCAGCTACGCGTTTGTGGCGGAGGATGGATCCTTCAACTTTACCACCCAAGACCTGCTCAATCTGCACAAGAGACCAACGTCTCCTGTGCTTCTCAACTGGGCTGTTGACAACCAGACATGCGCCCATGCCCGACAGAATTCGAGCAGCTACGCTTGCAAAGCCAACAGTGAATGCTATGAATCAGAAGCTGGTATTGGGTACCTCTGCAGATGTAAGGAGGGGTTCAAAGGCAACCCTTACCTCTCTCACCCGGATTCAGGCTGCCGAGATACCAATGAGTGCGCCACTCAAAAACTTTGCAGTATGAGATGCCACAACTTGGACGGCAACTATACTTGTTCTTGTCCCCCGGGATATAAAGGCGACGGTTACATTCATGGATCCGGCTGCAAATTCCCTTTCCTTGAAATATCATTAGGAATTAGTGTAGCCTTGCTGGTTTTTTTCATGCTACTCTCCACGTTATATTGGGTGCACAGGCAAAGAACAATGAAAAAATTGCGAAGGAGATATTTTGAACAAAATGGAGGAACTATGCTGCAACAATTTTCGCAAGGACAAGGATACTCTGAGAGAACTAGGATATTTACTGAAAATGAGCTTAAGAGTGCCACAAACAACTTTGATGAAAGTAGAATTCTTGGTCGAGGAGGACAAGGGACAGTGTACATGGGTATATTACCAGACAAAACACTCATTGCCATTAAGAAGTCTCGAGTAGGAGGAGATCCTAGACAAATTAAAGATTTTATTAATGAAATGGCCGTTCTTTCTCAAATCAACCATACAAACGTAGTCAAAATTTTGGGGTGTTGTCTTGAAACTGAAGCTCCTTTGTTGGTTTATGAGTTTGTGGACAATGGCACACTTCTTGATCACATAGATCCTTTAAAGAATGAGTTCTCTTTTTCATGGGAGACTCGATTGAGGATAGCTGCAGAAACTGCTGAAGCTATTTCATATTTACACTCTTATGCTTCAATTCCAATTATTCATCGGGATATCAAATCTGCTAACATACTTTTAGACCATAACCTCAAGGCAAAGGTATCTGATTTTGGAGCTTCAAGACTTGTTCCTCTTGATGAAACTCAAGTTACCACAGTGGTGCAAGGGACACTTGGATACTTGGATCCAGAGTATCTTCACACAAGCCAGTTGAATGAAAAGAGTGATGTTTATAGCTTTGGAGTTGTACTTGTGGAGTTATTGACAGGAAATAAAGTAGTTGAATTCAATAGACCGGAACAAAGAAACTTGGCCATGTACTTTGTGTCTTTGATGAAAGAAGATCGTTTGTGGGAAATTCTTGATAAAAGAGTATTGGATCAAAAGAACGCAGAGCAATTGAAAGAAGTTGCTTTCTTGGCAAGGAGATGTGTTAGAGTGAAAGGAAAGGAAAGGCCCACTATGAAAGAAGTAGCAATGGAACTACAGGGCATGAGGGCAATGGAAAAGCATCCTTGGGTAAAGGGTGAGGATCCAATGTCGGAAGAAAGTGAATACTTGCTGGGTCATATACCTGATGGTTATGAGGTAGCTAGTACAAGTAATTCAGTTGCCAATGATAGCATACAAAAGCAGATTGCATCCGAGATTGCAAATGGACGATGA 2196 0.4444 MGLRTLVLRVALVACTLGAAAAQLKARCDSKCGNVSIPYPFGTREGCFRDPSFLITCNSSSGFPIPYLRKGNIRVLNISLHPAEMRVSTLVPYDCYYPNGTNHRRKSTLTLKKFAISNTKNKFYVVGCDTYACLIGNDFATGCVSVCSNLTHMTNGSCSGVGCCTTTFPQAIRNFNLSIGSYENHTHVLAFNPCSYAFVAEDGSFNFTTQDLLNLHKRPTSPVLLNWAVDNQTCAHARQNSSSYACKANSECYESEAGIGYLCRCKEGFKGNPYLSHPDSGCRDTNECATQKLCSMRCHNLDGNYTCSCPPGYKGDGYIHGSGCKFPFLEISLGISVALLVFFMLLSTLYWVHRQRTMKKLRRRYFEQNGGTMLQQFSQGQGYSERTRIFTENELKSATNNFDESRILGRGGQGTVYMGILPDKTLIAIKKSRVGGDPRQIKDFINEMAVLSQINHTNVVKILGCCLETEAPLLVYEFVDNGTLLDHIDPLKNEFSFSWETRLRIAAETAEAISYLHSYASIPIIHRDIKSANILLDHNLKAKVSDFGASRLVPLDETQVTTVVQGTLGYLDPEYLHTSQLNEKSDVYSFGVVLVELLTGNKVVEFNRPEQRNLAMYFVSLMKEDRLWEILDKRVLDQKNAEQLKEVAFLARRCVRVKGKERPTMKEVAMELQGMRAMEKHPWVKGEDPMSEESEYLLGHIPDGYEVASTSNSVANDSIQKQIASEIANGR 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1521 731 SUPERFAMILY Protein kinase-like (PK-like) 384 686 IPR011009 -
Prci6g1521 731 ProSitePatterns Calcium-binding EGF-like domain signature. 284 307 IPR018097 GO:0005509
Prci6g1521 731 FunFam Wall-associated receptor kinase 2 372 478 - -
Prci6g1521 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 524 536 IPR008271 GO:0004672|GO:0006468
Prci6g1521 731 SMART egfca_6 284 325 IPR001881 GO:0005509
Prci6g1521 731 CDD EGF_CA 284 316 - -
Prci6g1521 731 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 679 IPR045274 GO:0007166
Prci6g1521 731 Gene3D Laminin 239 286 - -
Prci6g1521 731 FunFam Fibrillin 2 279 320 - -
Prci6g1521 731 Pfam Wall-associated receptor kinase galacturonan-binding 28 87 IPR025287 GO:0030247
Prci6g1521 731 Gene3D Laminin 287 319 - -
Prci6g1521 731 FunFam Wall-associated receptor kinase 2 479 695 - -
Prci6g1521 731 SUPERFAMILY EGF/Laminin 284 317 - -
Prci6g1521 731 Gene3D Phosphorylase Kinase; domain 1 374 478 - -
Prci6g1521 731 SMART egf_5 233 283 IPR000742 -
Prci6g1521 731 SMART egf_5 287 325 IPR000742 -
Prci6g1521 731 CDD STKc_IRAK 408 675 - -
Prci6g1521 731 ProSiteProfiles Protein kinase domain profile. 402 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1521 731 Pfam Protein kinase domain 403 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1521 731 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 298 309 IPR000152 -
Prci6g1521 731 SMART serkin_6 402 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1521 731 Gene3D Transferase(Phosphotransferase) domain 1 479 692 - -
Prci6g1521 731 ProSiteProfiles EGF-like domain profile. 284 316 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1521 Prci-Chr6 12035473 12038697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1521 22 731 Receptor kinase-like Gene Family AT1G21230 46.477 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci6g1521 Pkinase 3.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1521 - - csin:114299404 796.578