Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1510 ATGTCAAACAGCTCACAAGTCATAACATGCAAAGGTGCAATATGCTGGGGATTAGGGGAAGACGTGAAGGTGGAAAAGATACAAGTAGATCCACCTAAAGCTTCTGAAGCTCGAGTTAAGGTTCTTTGTGCTAGTGTTTGCCACACAGACATCTTGAGAGCTCGAGGTTTTCCTTGTCCTTCTTTTCCTCTAGCACTTGGGCACGAAGGAGTAGGTGTTGTGGAGAGCATAGGGGAGAAAGTGACGAACCTGAAAGTAGGAGATTTAGTGATTCCAACATACATTGGAGAGTGTCAAGAATGTGAGACCTGTATCTCAGAGGAATCAAACATGTGCATGAGATATCCTTTCACAGTGAGTGGGCTAATGCCTGATGACACATCAAGGATTTCCATTAGAGGGCAGAAGGTGTACCATACGAGTAGCTGCTCAACATGGTGTGAGTACATGGTTAGTGATGCAAACTACCTTGTGAAAGTTGATCCAAGTATTGATTTGGCTCATGCTACCTTCATCTCTTGTGGATTTTCTACTGGTTTTGGGGCTGCTTGGAAGACAGCCCAAATTCAAAGTGGATCAACCATGGCCGTTTTTGGCCTGGGAGCTGTTGGATTAGGGGCTATATGTGGTGCCAAGATGATGGGAGCGACTAAGATAATTGGGATTGACATAAATGAGAAGAAGAAAGAAAAAGGAGAAGCTTTTGGGATAACAGACTTCATAAATCCTAATGATCATTCTGATAAGCCTTCTTCTCAATTGGTGAAGGACCTCACTTGTGGACTTGGTGTGGATTATGCCATTGAGTGCATTGGTTTTGCCCCAATGGTTACTCAAGCCCTAGAATCCACCAAAGTGGGGAGAGGACAAGCAATAGCAATTGGTGCAGGAATAGAAGAATGTGTGCAAGTCAACTGGTTGGGTCTTCTTCTTGGAAGAACTTTAAAGGGTTCCATTTTTGGAGGCTTAAAACCAAAATCTCACCTTCCTATTTTAGCTACCAAATGCCAAAATAAGGATTTCCCTATCGATGAACTTGGGACCCATGAAGTCCCATTAACAGAGATAAGCAAAGCCTTTGAGCTCTTGAAACAGCCAGATTGTGTCAAAGTTCTCATCAAAATGTGTGACGTTTAA 1137 0.431 MSNSSQVITCKGAICWGLGEDVKVEKIQVDPPKASEARVKVLCASVCHTDILRARGFPCPSFPLALGHEGVGVVESIGEKVTNLKVGDLVIPTYIGECQECETCISEESNMCMRYPFTVSGLMPDDTSRISIRGQKVYHTSSCSTWCEYMVSDANYLVKVDPSIDLAHATFISCGFSTGFGAAWKTAQIQSGSTMAVFGLGAVGLGAICGAKMMGATKIIGIDINEKKKEKGEAFGITDFINPNDHSDKPSSQLVKDLTCGLGVDYAIECIGFAPMVTQALESTKVGRGQAIAIGAGIEECVQVNWLGLLLGRTLKGSIFGGLKPKSHLPILATKCQNKDFPIDELGTHEVPLTEISKAFELLKQPDCVKVLIKMCDV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1510 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 337 IPR036291 -
Prci6g1510 378 PANTHER ALCOHOL DEHYDROGENASE 6 367 - -
Prci6g1510 378 Gene3D - 14 370 - -
Prci6g1510 378 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 318 - -
Prci6g1510 378 SUPERFAMILY GroES-like 5 189 IPR011032 -
Prci6g1510 378 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
Prci6g1510 378 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Prci6g1510 378 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Prci6g1510 378 CDD liver_alcohol_DH_like 8 374 - -
Prci6g1510 378 Gene3D - 179 318 - -
Prci6g1510 378 Pfam Zinc-binding dehydrogenase 202 322 IPR013149 -
Prci6g1510 378 SMART PKS_ER_names_mod 17 373 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1510 Prci-Chr6 11899966 11904004 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1510 46 367 Monolignol Biosynthesis Gene Families AT1G72680 26.154 1.46e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1510 K00121 - gmx:100798341 521.546